RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 ANKRD36CQ5JPF3 1778 aa12.18□□□□□ -0.46
TMEM39A-208ENST00000486159 IBTKQ9P2D0 1353 aaPredicted RBP12.18□□□□□ -0.46
TMEM39A-208ENST00000486159 EPS15P42566 896 aa12.17□□□□□ -0.46
TMEM39A-208ENST00000486159 TCIRG1Q13488 830 aa12.17□□□□□ -0.46
TMEM39A-208ENST00000486159 AOC3Q16853 763 aa12.17□□□□□ -0.46
TMEM39A-208ENST00000486159 NLRP3Q96P20 1036 aa12.17□□□□□ -0.46
TMEM39A-208ENST00000486159 IQCA1LA6NCM1 817 aa12.16□□□□□ -0.46
TMEM39A-208ENST00000486159 ATP5J2-PTCD1G3V325 749 aa12.16□□□□□ -0.46
TMEM39A-208ENST00000486159 SCNN1DP51172 638 aa12.16□□□□□ -0.46
TMEM39A-208ENST00000486159 PARP10Q53GL7 1025 aa12.16□□□□□ -0.46
TMEM39A-208ENST00000486159 RTL5Q5HYW3 569 aaPredicted RBP12.16□□□□□ -0.46
TMEM39A-208ENST00000486159 LARGE2Q8N3Y3 721 aa12.16□□□□□ -0.46
TMEM39A-208ENST00000486159 DDX21Q9NR30 783 aaKnown RBP eCLIP12.16□□□□□ -0.46
TMEM39A-208ENST00000486159 CREBZFQ9NS37 354 aa12.16□□□□□ -0.46
TMEM39A-208ENST00000486159 BABAM1Q9NWV8 329 aa12.16□□□□□ -0.46
TMEM39A-208ENST00000486159 ELL2O00472 640 aaPredicted RBP12.15□□□□□ -0.46
TMEM39A-208ENST00000486159 NEFLP07196 543 aa12.15□□□□□ -0.46
TMEM39A-208ENST00000486159 LMOD3Q0VAK6 560 aa12.15□□□□□ -0.46
TMEM39A-208ENST00000486159 WDR43Q15061 677 aaKnown RBP eCLIP12.15□□□□□ -0.46
TMEM39A-208ENST00000486159 DUSP27Q5VZP5 1158 aa12.15□□□□□ -0.46
TMEM39A-208ENST00000486159 CNTROBQ8N137 903 aa12.15□□□□□ -0.46
TMEM39A-208ENST00000486159 GPC2Q8N158 579 aa12.15□□□□□ -0.46
TMEM39A-208ENST00000486159 JDP2Q8WYK2 163 aa12.15□□□□□ -0.46
TMEM39A-208ENST00000486159 MBIPQ9NS73 344 aa12.15□□□□□ -0.46
TMEM39A-208ENST00000486159 TRMT112Q9UI30 125 aaKnown RBP12.15□□□□□ -0.46
TMEM39A-208ENST00000486159 ATP6V0A2Q9Y487 856 aa12.15□□□□□ -0.46
TMEM39A-208ENST00000486159 DDX60Q8IY21 1712 aaKnown RBP12.14□□□□□ -0.47
TMEM39A-208ENST00000486159 SHTN1A0MZ66 631 aa12.14□□□□□ -0.47
TMEM39A-208ENST00000486159 APAF1O14727 1248 aa12.14□□□□□ -0.47
TMEM39A-208ENST00000486159 PPIP5K2O43314 1243 aa12.14□□□□□ -0.47
TMEM39A-208ENST00000486159 VEGFBP49765 207 aa12.14□□□□□ -0.47
TMEM39A-208ENST00000486159 EIF6P56537 245 aaKnown RBP12.14□□□□□ -0.47
TMEM39A-208ENST00000486159 HDGFL1Q5TGJ6 251 aa12.14□□□□□ -0.47
TMEM39A-208ENST00000486159 JARID2Q92833 1246 aaPredicted RBP12.14□□□□□ -0.47
TMEM39A-208ENST00000486159 FAM89AQ96GI7 184 aa12.14□□□□□ -0.47
TMEM39A-208ENST00000486159 CNTNAP1P78357 1384 aa12.14□□□□□ -0.47
TMEM39A-208ENST00000486159 TRAF5O00463 557 aa12.13□□□□□ -0.47
TMEM39A-208ENST00000486159 CXCL9Q07325 125 aa12.13□□□□□ -0.47
TMEM39A-208ENST00000486159 CC2D2BQ6DHV5 1058 aa12.13□□□□□ -0.47
TMEM39A-208ENST00000486159 ISCA1Q9BUE6 129 aa12.13□□□□□ -0.47
TMEM39A-208ENST00000486159 PHAXQ9H814 394 aaKnown RBP12.13□□□□□ -0.47
TMEM39A-208ENST00000486159 TMEM88BA6NKF7 163 aa12.12□□□□□ -0.47
TMEM39A-208ENST00000486159 YDJCA8MPS7 323 aa12.12□□□□□ -0.47
TMEM39A-208ENST00000486159 FOXN1O15353 648 aa12.12□□□□□ -0.47
TMEM39A-208ENST00000486159 ZNF853P0CG23 659 aa12.12□□□□□ -0.47
TMEM39A-208ENST00000486159 MLLT1Q03111 559 aaPredicted RBP12.12□□□□□ -0.47
TMEM39A-208ENST00000486159 DLK2Q6UY11 383 aa12.12□□□□□ -0.47
TMEM39A-208ENST00000486159 ANKRD13DQ6ZTN6 518 aa12.12□□□□□ -0.47
TMEM39A-208ENST00000486159 NIM1KQ8IY84 436 aa12.12□□□□□ -0.47
TMEM39A-208ENST00000486159 C8orf58Q8NAV2 365 aa12.12□□□□□ -0.47
TMEM39A-208ENST00000486159 CELF1Q92879 486 aaKnown RBP12.12□□□□□ -0.47
TMEM39A-208ENST00000486159 GPR101Q96P66 508 aaPredicted RBP12.12□□□□□ -0.47
TMEM39A-208ENST00000486159 SH3TC1Q8TE82 1336 aa12.11□□□□□ -0.47
TMEM39A-208ENST00000486159 DUOX1Q9NRD9 1551 aa12.11□□□□□ -0.47
TMEM39A-208ENST00000486159 RAD17O75943 681 aa12.11□□□□□ -0.47
TMEM39A-208ENST00000486159 HSP90AB3PQ58FF7 597 aa12.11□□□□□ -0.47
TMEM39A-208ENST00000486159 ERICH6BQ5W0A0 696 aa12.11□□□□□ -0.47
TMEM39A-208ENST00000486159 SP8Q8IXZ3 490 aa12.11□□□□□ -0.47
TMEM39A-208ENST00000486159 MPNDQ8N594 471 aa12.11□□□□□ -0.47
TMEM39A-208ENST00000486159 PLBD2Q8NHP8 589 aa12.11□□□□□ -0.47
TMEM39A-208ENST00000486159 CFAP44Q96MT7 982 aa12.11□□□□□ -0.47
TMEM39A-208ENST00000486159 RTFDC1Q9BY42 306 aaPredicted RBP12.11□□□□□ -0.47
TMEM39A-208ENST00000486159 BBOX1O75936 387 aa12.1□□□□□ -0.47
TMEM39A-208ENST00000486159 GMPSP49915 693 aaPredicted RBP12.1□□□□□ -0.47
TMEM39A-208ENST00000486159 HIRAP54198 1017 aaPredicted RBP12.1□□□□□ -0.47
TMEM39A-208ENST00000486159 GRAPQ13588 217 aa12.1□□□□□ -0.47
TMEM39A-208ENST00000486159 CST9Q5W186 159 aa12.1□□□□□ -0.47
TMEM39A-208ENST00000486159 DPP8Q6V1X1 898 aaPredicted RBP12.1□□□□□ -0.47
TMEM39A-208ENST00000486159 DDX46Q7L014 1031 aaKnown RBP12.1□□□□□ -0.47
TMEM39A-208ENST00000486159 PNMA8AQ86V59 439 aaPredicted RBP12.1□□□□□ -0.47
TMEM39A-208ENST00000486159 TSPYL6Q8N831 410 aa12.1□□□□□ -0.47
TMEM39A-208ENST00000486159 GRAPLQ8TC17 118 aaPredicted RBP12.1□□□□□ -0.47
TMEM39A-208ENST00000486159 KCNQ5Q9NR82 932 aa12.1□□□□□ -0.47
TMEM39A-208ENST00000486159 DBF4Q9UBU7 674 aaPredicted RBP12.1□□□□□ -0.47
TMEM39A-208ENST00000486159 RIMBP2O15034 1052 aa12.09□□□□□ -0.47
TMEM39A-208ENST00000486159 LMOD1P29536 600 aaPredicted RBP12.09□□□□□ -0.47
TMEM39A-208ENST00000486159 SEC31BQ9NQW1 1179 aa12.09□□□□□ -0.47
TMEM39A-208ENST00000486159 GPRC5DQ9NZD1 345 aa12.09□□□□□ -0.47
TMEM39A-208ENST00000486159 POLLQ9UGP5 575 aa12.09□□□□□ -0.47
TMEM39A-208ENST00000486159 ZNRF3Q9ULT6 936 aa12.09□□□□□ -0.47
TMEM39A-208ENST00000486159 GPSM2P81274 684 aa12.08□□□□□ -0.48
TMEM39A-208ENST00000486159 KIAA2012Q0VF49 1180 aa12.08□□□□□ -0.48
TMEM39A-208ENST00000486159 DEFB115Q30KQ5 88 aa12.08□□□□□ -0.48
TMEM39A-208ENST00000486159 TRPM4Q8TD43 1214 aa12.08□□□□□ -0.48
TMEM39A-208ENST00000486159 CCDC85AQ96PX6 553 aaPredicted RBP12.08□□□□□ -0.48
TMEM39A-208ENST00000486159 MYD88Q99836 296 aa12.08□□□□□ -0.48
TMEM39A-208ENST00000486159 WTIPA6NIX2 430 aaPredicted RBP12.07□□□□□ -0.48
TMEM39A-208ENST00000486159 RASSF10A6NK89 507 aa12.07□□□□□ -0.48
TMEM39A-208ENST00000486159 IRS4O14654 1257 aaPredicted RBP12.07□□□□□ -0.48
TMEM39A-208ENST00000486159 EGFRP00533 1210 aa12.07□□□□□ -0.48
TMEM39A-208ENST00000486159 HOXB7P09629 217 aa12.07□□□□□ -0.48
TMEM39A-208ENST00000486159 GRM1Q13255 1194 aa12.07□□□□□ -0.48
TMEM39A-208ENST00000486159 SF3B3Q15393 1217 aaKnown RBP12.07□□□□□ -0.48
TMEM39A-208ENST00000486159 DOK7Q18PE1 504 aa12.07□□□□□ -0.48
TMEM39A-208ENST00000486159 GRIPAP1Q4V328 841 aa12.07□□□□□ -0.48
TMEM39A-208ENST00000486159 CIAPIN1Q6FI81 312 aa12.07□□□□□ -0.48
TMEM39A-208ENST00000486159 CYP4F22Q6NT55 531 aa12.07□□□□□ -0.48
TMEM39A-208ENST00000486159 RIC3Q7Z5B4 369 aa12.07□□□□□ -0.48
TMEM39A-208ENST00000486159 TSR2Q969E8 191 aaKnown RBP12.07□□□□□ -0.48
TMEM39A-208ENST00000486159 GLIS2Q9BZE0 524 aaPredicted RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms