RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 SIRT2Q8IXJ6 389 aa21.94■■□□□ 1.1
CHMP3-207ENST00000485465 CCDC85AQ96PX6 553 aaPredicted RBP21.94■■□□□ 1.1
CHMP3-207ENST00000485465 CHMP3Q9Y3E7 222 aa21.94■■□□□ 1.1
CHMP3-207ENST00000485465 C10orf71Q711Q0 1435 aa21.94■■□□□ 1.1
CHMP3-207ENST00000485465 TNRC6CQ9HCJ0 1690 aaKnown RBP21.94■■□□□ 1.1
CHMP3-207ENST00000485465 PNMA6EA0A0J9YXQ4 647 aa21.93■■□□□ 1.1
CHMP3-207ENST00000485465 SRGAP3O43295 1099 aa21.93■■□□□ 1.1
CHMP3-207ENST00000485465 GREM2Q9H772 168 aa21.93■■□□□ 1.1
CHMP3-207ENST00000485465 FAM161AQ3B820 660 aa21.92■■□□□ 1.1
CHMP3-207ENST00000485465 CRY2Q49AN0 593 aa21.92■■□□□ 1.1
CHMP3-207ENST00000485465 SSH3Q8TE77 659 aa21.92■■□□□ 1.1
CHMP3-207ENST00000485465 RTL9Q8NET4 1388 aa21.91■■□□□ 1.1
CHMP3-207ENST00000485465 POLA2Q14181 598 aa21.91■■□□□ 1.1
CHMP3-207ENST00000485465 ANKRD31Q8N7Z5 1873 aa21.91■■□□□ 1.1
CHMP3-207ENST00000485465 MYH3P11055 1940 aa21.9■■□□□ 1.1
CHMP3-207ENST00000485465 HMMRO75330 724 aa21.9■■□□□ 1.1
CHMP3-207ENST00000485465 ITGA6P23229 1130 aa21.9■■□□□ 1.1
CHMP3-207ENST00000485465 IFIT5Q13325 482 aaKnown RBP21.9■■□□□ 1.1
CHMP3-207ENST00000485465 CCDC57Q2TAC2 916 aa21.9■■□□□ 1.1
CHMP3-207ENST00000485465 PDZRN3Q9UPQ7 1066 aa21.9■■□□□ 1.1
CHMP3-207ENST00000485465 ANKRD18BA2A2Z9 1011 aa21.89■■□□□ 1.09
CHMP3-207ENST00000485465 RFX5P48382 616 aaPredicted RBP21.89■■□□□ 1.09
CHMP3-207ENST00000485465 C2CD5Q86YS7 1000 aa21.89■■□□□ 1.09
CHMP3-207ENST00000485465 RPGRQ92834 1020 aaKnown RBP21.89■■□□□ 1.09
CHMP3-207ENST00000485465 SEC31BQ9NQW1 1179 aa21.89■■□□□ 1.09
CHMP3-207ENST00000485465 H0YIN7 160 aa21.88■■□□□ 1.09
CHMP3-207ENST00000485465 SRGNP10124 158 aa21.88■■□□□ 1.09
CHMP3-207ENST00000485465 HOXA10P31260 410 aaPredicted RBP21.88■■□□□ 1.09
CHMP3-207ENST00000485465 HDAC1Q13547 482 aaPredicted RBP21.88■■□□□ 1.09
CHMP3-207ENST00000485465 DDX46Q7L014 1031 aaKnown RBP21.88■■□□□ 1.09
CHMP3-207ENST00000485465 PPP4R2Q9NY27 417 aa21.88■■□□□ 1.09
CHMP3-207ENST00000485465 NPR1P16066 1061 aa21.87■■□□□ 1.09
CHMP3-207ENST00000485465 RBM17Q96I25 401 aaKnown RBP21.87■■□□□ 1.09
CHMP3-207ENST00000485465 RWDD1Q9H446 243 aaPredicted RBP21.87■■□□□ 1.09
CHMP3-207ENST00000485465 CD2APQ9Y5K6 639 aa21.87■■□□□ 1.09
CHMP3-207ENST00000485465 TGFB2P61812 414 aa21.86■■□□□ 1.09
CHMP3-207ENST00000485465 PTPN12Q05209 780 aaKnown RBP21.86■■□□□ 1.09
CHMP3-207ENST00000485465 MASTLQ96GX5 879 aa21.86■■□□□ 1.09
CHMP3-207ENST00000485465 GTF3C3Q9Y5Q9 886 aa21.86■■□□□ 1.09
CHMP3-207ENST00000485465 KIF13BQ9NQT8 1826 aa21.85■■□□□ 1.09
CHMP3-207ENST00000485465 IGHDP01880 384 aa21.85■■□□□ 1.09
CHMP3-207ENST00000485465 CHRNA5P30532 468 aa21.85■■□□□ 1.09
CHMP3-207ENST00000485465 TAF7LQ5H9L4 462 aa21.85■■□□□ 1.09
CHMP3-207ENST00000485465 KLHDC4Q8TBB5 520 aa21.85■■□□□ 1.09
CHMP3-207ENST00000485465 ZNF594Q96JF6 807 aaPredicted RBP21.85■■□□□ 1.09
CHMP3-207ENST00000485465 CRAMP1Q96RY5 1269 aa21.85■■□□□ 1.09
CHMP3-207ENST00000485465 CDC5LQ99459 802 aaKnown RBP21.85■■□□□ 1.09
CHMP3-207ENST00000485465 COPRSQ9NQ92 184 aa21.85■■□□□ 1.09
CHMP3-207ENST00000485465 PPP1R1BQ9UD71 204 aaPredicted RBP21.85■■□□□ 1.09
CHMP3-207ENST00000485465 PA2G4Q9UQ80 394 aaKnown RBP21.85■■□□□ 1.09
CHMP3-207ENST00000485465 GRAPQ13588 217 aa21.84■■□□□ 1.09
CHMP3-207ENST00000485465 STYK1Q6J9G0 422 aa21.84■■□□□ 1.09
CHMP3-207ENST00000485465 KLHL34Q8N239 644 aa21.84■■□□□ 1.09
CHMP3-207ENST00000485465 GRAPLQ8TC17 118 aaPredicted RBP21.84■■□□□ 1.09
CHMP3-207ENST00000485465 CELF1Q92879 486 aaKnown RBP21.84■■□□□ 1.09
CHMP3-207ENST00000485465 DPEP1P16444 411 aa21.83■■□□□ 1.09
CHMP3-207ENST00000485465 RPS8P62241 208 aaKnown RBP21.83■■□□□ 1.09
CHMP3-207ENST00000485465 ANKRD18AQ8IVF6 992 aa21.83■■□□□ 1.09
CHMP3-207ENST00000485465 ZNF622Q969S3 477 aaKnown RBP eCLIP21.83■■□□□ 1.09
CHMP3-207ENST00000485465 CCDC136Q96JN2 1154 aa21.83■■□□□ 1.09
CHMP3-207ENST00000485465 NOP58Q9Y2X3 529 aaKnown RBP21.83■■□□□ 1.09
CHMP3-207ENST00000485465 COL11A2P13942 1736 aaPredicted RBP21.83■■□□□ 1.08
CHMP3-207ENST00000485465 A0A0G2JLW4 131 aa21.82■■□□□ 1.08
CHMP3-207ENST00000485465 SURF6O75683 361 aaKnown RBP21.82■■□□□ 1.08
CHMP3-207ENST00000485465 ALDH1B1P30837 517 aa21.82■■□□□ 1.08
CHMP3-207ENST00000485465 IGHMBP2P38935 993 aaKnown RBP21.82■■□□□ 1.08
CHMP3-207ENST00000485465 DCTPP1Q9H773 170 aa21.82■■□□□ 1.08
CHMP3-207ENST00000485465 KCNA3P22001 575 aa21.81■■□□□ 1.08
CHMP3-207ENST00000485465 LDHAL6AQ6ZMR3 332 aa21.81■■□□□ 1.08
CHMP3-207ENST00000485465 MPHOSPH8Q99549 860 aa21.81■■□□□ 1.08
CHMP3-207ENST00000485465 SIL1Q9H173 461 aa21.81■■□□□ 1.08
CHMP3-207ENST00000485465 COL4A1P02462 1669 aa21.81■■□□□ 1.08
CHMP3-207ENST00000485465 EYA2O00167 538 aa21.8■■□□□ 1.08
CHMP3-207ENST00000485465 BBOX1O75936 387 aa21.8■■□□□ 1.08
CHMP3-207ENST00000485465 G3BP1Q13283 466 aaKnown RBP eCLIP21.8■■□□□ 1.08
CHMP3-207ENST00000485465 B4GALNT3Q6L9W6 998 aa21.8■■□□□ 1.08
CHMP3-207ENST00000485465 CNKSR1Q969H4 720 aa21.8■■□□□ 1.08
CHMP3-207ENST00000485465 PUS3Q9BZE2 481 aaKnown RBP21.8■■□□□ 1.08
CHMP3-207ENST00000485465 FBXO3Q9UK99 471 aa21.8■■□□□ 1.08
CHMP3-207ENST00000485465 EXOC6BQ9Y2D4 811 aa21.8■■□□□ 1.08
CHMP3-207ENST00000485465 CIAO1O76071 339 aa21.79■■□□□ 1.08
CHMP3-207ENST00000485465 LRRC24Q50LG9 513 aa21.79■■□□□ 1.08
CHMP3-207ENST00000485465 FHDC1Q9C0D6 1143 aaPredicted RBP21.79■■□□□ 1.08
CHMP3-207ENST00000485465 CNNM1Q9NRU3 951 aa21.79■■□□□ 1.08
CHMP3-207ENST00000485465 BSDC1Q9NW68 430 aaPredicted RBP21.79■■□□□ 1.08
CHMP3-207ENST00000485465 KIAA1551Q9HCM1 1747 aa21.78■■□□□ 1.08
CHMP3-207ENST00000485465 LRP5O75197 1615 aa21.78■■□□□ 1.08
CHMP3-207ENST00000485465 HSP90AB4PQ58FF6 505 aa21.78■■□□□ 1.08
CHMP3-207ENST00000485465 ATG9AQ7Z3C6 839 aa21.78■■□□□ 1.08
CHMP3-207ENST00000485465 GCC1Q96CN9 775 aa21.78■■□□□ 1.08
CHMP3-207ENST00000485465 RIPOR2Q9Y4F9 1068 aa21.78■■□□□ 1.08
CHMP3-207ENST00000485465 TAF1P21675 1872 aa21.77■■□□□ 1.08
CHMP3-207ENST00000485465 IL15P40933 162 aaPredicted RBP21.77■■□□□ 1.08
CHMP3-207ENST00000485465 OS9Q13438 667 aaPredicted RBP21.77■■□□□ 1.08
CHMP3-207ENST00000485465 PPEF1O14829 653 aaPredicted RBP21.76■■□□□ 1.07
CHMP3-207ENST00000485465 RAB11FIP3O75154 756 aa21.76■■□□□ 1.07
CHMP3-207ENST00000485465 TMC4Q7Z404 712 aa21.76■■□□□ 1.07
CHMP3-207ENST00000485465 SMC5Q8IY18 1101 aa21.76■■□□□ 1.07
CHMP3-207ENST00000485465 TTLL6Q8N841 843 aa21.76■■□□□ 1.07
CHMP3-207ENST00000485465 NLGN2Q8NFZ4 835 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms