RNA–Protein interactions for RNA: ENST00000485407.1

NHLRC3-205, Transcript of NHL repeat containing 3, humanhuman

TSL 3

Gene NHLRC3, Length 623 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-205ENST00000485407 C9orf131Q5VYM1 1079 aa7.72□□□□□ -1.17
NHLRC3-205ENST00000485407 SPRYD7Q5W111 196 aa7.72□□□□□ -1.17
NHLRC3-205ENST00000485407 BRICD5Q6PL45 260 aa7.72□□□□□ -1.17
NHLRC3-205ENST00000485407 TRIM67Q6ZTA4 783 aa7.72□□□□□ -1.17
NHLRC3-205ENST00000485407 ZBTB33Q86T24 672 aa7.72□□□□□ -1.17
NHLRC3-205ENST00000485407 DZIP3Q86Y13 1208 aaKnown RBP7.72□□□□□ -1.17
NHLRC3-205ENST00000485407 OCSTAMPQ9BR26 566 aa7.72□□□□□ -1.17
NHLRC3-205ENST00000485407 USP21Q9UK80 565 aa7.72□□□□□ -1.17
NHLRC3-205ENST00000485407 METP08581 1390 aa7.71□□□□□ -1.17
NHLRC3-205ENST00000485407 LAMC1P11047 1609 aa7.71□□□□□ -1.17
NHLRC3-205ENST00000485407 ATRNO75882 1429 aa7.71□□□□□ -1.17
NHLRC3-205ENST00000485407 FMNL1O95466 1100 aaPredicted RBP7.71□□□□□ -1.18
NHLRC3-205ENST00000485407 ZNF598Q86UK7 904 aaKnown RBP7.71□□□□□ -1.18
NHLRC3-205ENST00000485407 RGL4Q8IZJ4 473 aa7.71□□□□□ -1.18
NHLRC3-205ENST00000485407 ABCC11Q96J66 1382 aa7.71□□□□□ -1.18
NHLRC3-205ENST00000485407 SCAMP3O14828 347 aaKnown RBP7.7□□□□□ -1.18
NHLRC3-205ENST00000485407 CCNYL3P0C7X3 344 aa7.7□□□□□ -1.18
NHLRC3-205ENST00000485407 ARHGAP4P98171 946 aa7.7□□□□□ -1.18
NHLRC3-205ENST00000485407 L3MBTL2Q969R5 705 aa7.7□□□□□ -1.18
NHLRC3-205ENST00000485407 LRRC59Q96AG4 307 aaKnown RBP7.7□□□□□ -1.18
NHLRC3-205ENST00000485407 CCDC85AQ96PX6 553 aaPredicted RBP7.7□□□□□ -1.18
NHLRC3-205ENST00000485407 SIN3AQ96ST3 1273 aa7.7□□□□□ -1.18
NHLRC3-205ENST00000485407 SALL2Q9Y467 1007 aaPredicted RBP7.7□□□□□ -1.18
NHLRC3-205ENST00000485407 TECPR2O15040 1411 aa7.69□□□□□ -1.18
NHLRC3-205ENST00000485407 PTCH1Q13635 1447 aa7.69□□□□□ -1.18
NHLRC3-205ENST00000485407 PTPRUQ92729 1446 aa7.69□□□□□ -1.18
NHLRC3-205ENST00000485407 XRN1Q8IZH2 1706 aaKnown RBP7.69□□□□□ -1.18
NHLRC3-205ENST00000485407 ADAMTS2O95450 1211 aa7.69□□□□□ -1.18
NHLRC3-205ENST00000485407 HDLBPQ00341 1268 aaKnown RBP7.69□□□□□ -1.18
NHLRC3-205ENST00000485407 NEUROD1Q13562 356 aa7.69□□□□□ -1.18
NHLRC3-205ENST00000485407 ECM1Q16610 540 aa7.69□□□□□ -1.18
NHLRC3-205ENST00000485407 BRINP3Q76B58 766 aa7.69□□□□□ -1.18
NHLRC3-205ENST00000485407 FAM160A2Q8N612 972 aaPredicted RBP7.69□□□□□ -1.18
NHLRC3-205ENST00000485407 C19orf44Q9H6X5 657 aa7.69□□□□□ -1.18
NHLRC3-205ENST00000485407 LRPPRCP42704 1394 aaKnown RBP7.69□□□□□ -1.18
NHLRC3-205ENST00000485407 PNPLA6Q8IY17 1366 aa7.69□□□□□ -1.18
NHLRC3-205ENST00000485407 KIAA1210Q9ULL0 1709 aa7.69□□□□□ -1.18
NHLRC3-205ENST00000485407 PTCD1O75127 700 aaKnown RBP7.68□□□□□ -1.18
NHLRC3-205ENST00000485407 P4HBP07237 508 aaKnown RBP7.68□□□□□ -1.18
NHLRC3-205ENST00000485407 NCLP19338 710 aaKnown RBP7.68□□□□□ -1.18
NHLRC3-205ENST00000485407 R3HDM1Q15032 1099 aaKnown RBP7.68□□□□□ -1.18
NHLRC3-205ENST00000485407 ZNF697Q5TEC3 545 aa7.68□□□□□ -1.18
NHLRC3-205ENST00000485407 CAPN12Q6ZSI9 719 aa7.68□□□□□ -1.18
NHLRC3-205ENST00000485407 PRDM9Q9NQV7 894 aa7.68□□□□□ -1.18
NHLRC3-205ENST00000485407 EVA1BQ9NVM1 165 aa7.68□□□□□ -1.18
NHLRC3-205ENST00000485407 YTHDC2Q9H6S0 1430 aaKnown RBP7.68□□□□□ -1.18
NHLRC3-205ENST00000485407 ATF3P18847 181 aa7.67□□□□□ -1.18
NHLRC3-205ENST00000485407 PRR20EP86478 221 aa7.67□□□□□ -1.18
NHLRC3-205ENST00000485407 PRR20CP86479 221 aa7.67□□□□□ -1.18
NHLRC3-205ENST00000485407 PRR20DP86480 221 aa7.67□□□□□ -1.18
NHLRC3-205ENST00000485407 PRR20BP86481 221 aa7.67□□□□□ -1.18
NHLRC3-205ENST00000485407 PRR20AP86496 221 aa7.67□□□□□ -1.18
NHLRC3-205ENST00000485407 XPCQ01831 940 aaPredicted RBP7.67□□□□□ -1.18
NHLRC3-205ENST00000485407 NAA30Q147X3 362 aaPredicted RBP7.67□□□□□ -1.18
NHLRC3-205ENST00000485407 TMC1Q8TDI8 760 aa7.67□□□□□ -1.18
NHLRC3-205ENST00000485407 NUDT12Q9BQG2 462 aa7.67□□□□□ -1.18
NHLRC3-205ENST00000485407 TONSLQ96HA7 1378 aa7.67□□□□□ -1.18
NHLRC3-205ENST00000485407 DCCP43146 1447 aa7.67□□□□□ -1.18
NHLRC3-205ENST00000485407 KNDC1Q76NI1 1749 aa7.66□□□□□ -1.18
NHLRC3-205ENST00000485407 GIGYF1O75420 1035 aaPredicted RBP7.66□□□□□ -1.18
NHLRC3-205ENST00000485407 BAG6P46379 1132 aa7.66□□□□□ -1.18
NHLRC3-205ENST00000485407 FKBP5Q13451 457 aaPredicted RBP7.66□□□□□ -1.18
NHLRC3-205ENST00000485407 MRPL58Q14197 206 aaKnown RBP7.66□□□□□ -1.18
NHLRC3-205ENST00000485407 MSS51Q4VC12 460 aa7.66□□□□□ -1.18
NHLRC3-205ENST00000485407 TMEM132EQ6IEE7 984 aa7.66□□□□□ -1.18
NHLRC3-205ENST00000485407 DPH6Q7L8W6 267 aa7.66□□□□□ -1.18
NHLRC3-205ENST00000485407 TMEM87AQ8NBN3 555 aa7.66□□□□□ -1.18
NHLRC3-205ENST00000485407 PIK3R5Q8WYR1 880 aa7.66□□□□□ -1.18
NHLRC3-205ENST00000485407 CARD14Q9BXL6 1004 aa7.66□□□□□ -1.18
NHLRC3-205ENST00000485407 MRS2Q9HD23 443 aa7.66□□□□□ -1.18
NHLRC3-205ENST00000485407 FCF1Q9Y324 198 aaKnown RBP7.66□□□□□ -1.18
NHLRC3-205ENST00000485407 PCDHGA11Q9Y5H2 935 aa7.66□□□□□ -1.18
NHLRC3-205ENST00000485407 DLC1Q96QB1 1528 aa7.66□□□□□ -1.18
NHLRC3-205ENST00000485407 ADGRB1O14514 1584 aa7.66□□□□□ -1.18
NHLRC3-205ENST00000485407 GDF9O60383 454 aa7.65□□□□□ -1.18
NHLRC3-205ENST00000485407 FAM13AO94988 1023 aa7.65□□□□□ -1.18
NHLRC3-205ENST00000485407 WEE1P30291 646 aa7.65□□□□□ -1.18
NHLRC3-205ENST00000485407 RNF20Q5VTR2 975 aa7.65□□□□□ -1.18
NHLRC3-205ENST00000485407 TMC7Q7Z402 723 aa7.65□□□□□ -1.18
NHLRC3-205ENST00000485407 TSEN2Q8NCE0 465 aaKnown RBP7.65□□□□□ -1.18
NHLRC3-205ENST00000485407 PURBQ96QR8 312 aaKnown RBP7.65□□□□□ -1.18
NHLRC3-205ENST00000485407 CHMP4AQ9BY43 222 aa7.65□□□□□ -1.18
NHLRC3-205ENST00000485407 TANGO6Q9C0B7 1094 aa7.65□□□□□ -1.18
NHLRC3-205ENST00000485407 ADGRL3Q9HAR2 1447 aa7.65□□□□□ -1.18
NHLRC3-205ENST00000485407 ROBO2Q9HCK4 1378 aa7.65□□□□□ -1.18
NHLRC3-205ENST00000485407 ASXL1Q8IXJ9 1541 aa7.64□□□□□ -1.19
NHLRC3-205ENST00000485407 NINLQ9Y2I6 1382 aa7.64□□□□□ -1.19
NHLRC3-205ENST00000485407 MAGEB6P1A0A0J9YX57 407 aa7.64□□□□□ -1.19
NHLRC3-205ENST00000485407 NDUFB5O43674 189 aa7.64□□□□□ -1.19
NHLRC3-205ENST00000485407 RPIAP49247 311 aa7.64□□□□□ -1.19
NHLRC3-205ENST00000485407 USP4Q13107 963 aa7.64□□□□□ -1.19
NHLRC3-205ENST00000485407 GAS2L2Q8NHY3 880 aa7.64□□□□□ -1.19
NHLRC3-205ENST00000485407 HELQQ8TDG4 1101 aa7.64□□□□□ -1.19
NHLRC3-205ENST00000485407 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.64□□□□□ -1.19
NHLRC3-205ENST00000485407 GPRASP1Q5JY77 1395 aa7.63□□□□□ -1.19
NHLRC3-205ENST00000485407 ANKRD62A6NC57 917 aa7.63□□□□□ -1.19
NHLRC3-205ENST00000485407 NT5DC4Q86YG4 428 aa7.63□□□□□ -1.19
NHLRC3-205ENST00000485407 ANKRD13AQ8IZ07 590 aa7.63□□□□□ -1.19
NHLRC3-205ENST00000485407 FAM161BQ96MY7 647 aa7.63□□□□□ -1.19
NHLRC3-205ENST00000485407 DNAJC2Q99543 621 aaKnown RBP7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms