RNA–Protein interactions for RNA: ENST00000485122.6

EXOSC1-210, Transcript of exosome component 1, humanhuman

TSL 5 BASIC

Gene EXOSC1, Length 564 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-210ENST00000485122 YDJCA8MPS7 323 aa13.9□□□□□ -0.18
EXOSC1-210ENST00000485122 PPEF1O14829 653 aaPredicted RBP13.9□□□□□ -0.18
EXOSC1-210ENST00000485122 TNNT2P45379 298 aaPredicted RBP13.9□□□□□ -0.18
EXOSC1-210ENST00000485122 CRY2Q49AN0 593 aa13.9□□□□□ -0.18
EXOSC1-210ENST00000485122 CD99L2Q8TCZ2 262 aa13.9□□□□□ -0.18
EXOSC1-210ENST00000485122 CFHR5Q9BXR6 569 aa13.9□□□□□ -0.18
EXOSC1-210ENST00000485122 VCANP13611 3396 aa13.89□□□□□ -0.19
EXOSC1-210ENST00000485122 PRAMEF22A3QJZ6 481 aa13.89□□□□□ -0.19
EXOSC1-210ENST00000485122 SLC4A8Q2Y0W8 1093 aa13.89□□□□□ -0.19
EXOSC1-210ENST00000485122 TPTE2Q6XPS3 522 aa13.89□□□□□ -0.19
EXOSC1-210ENST00000485122 RIC1Q4ADV7 1423 aa13.89□□□□□ -0.19
EXOSC1-210ENST00000485122 UBE2Q2LH0YL09 131 aa13.88□□□□□ -0.19
EXOSC1-210ENST00000485122 RNMTO43148 476 aaKnown RBP13.88□□□□□ -0.19
EXOSC1-210ENST00000485122 SULF1Q8IWU6 871 aa13.88□□□□□ -0.19
EXOSC1-210ENST00000485122 NIP7Q9Y221 180 aaKnown RBP eCLIP13.88□□□□□ -0.19
EXOSC1-210ENST00000485122 TNIP1Q15025 636 aa13.87□□□□□ -0.19
EXOSC1-210ENST00000485122 NUTM1Q86Y26 1132 aa13.87□□□□□ -0.19
EXOSC1-210ENST00000485122 ZNF496Q96IT1 587 aaPredicted RBP13.87□□□□□ -0.19
EXOSC1-210ENST00000485122 CARD14Q9BXL6 1004 aa13.87□□□□□ -0.19
EXOSC1-210ENST00000485122 MTMR10Q9NXD2 777 aa13.87□□□□□ -0.19
EXOSC1-210ENST00000485122 SCAF8Q9UPN6 1271 aaKnown RBP13.87□□□□□ -0.19
EXOSC1-210ENST00000485122 HEG1Q9ULI3 1381 aa13.86□□□□□ -0.19
EXOSC1-210ENST00000485122 RPGRQ92834 1020 aaKnown RBP13.86□□□□□ -0.19
EXOSC1-210ENST00000485122 SPTBN5Q9NRC6 3674 aaKnown RBP13.86□□□□□ -0.19
EXOSC1-210ENST00000485122 A0A1W2PPC1 479 aa13.85□□□□□ -0.19
EXOSC1-210ENST00000485122 GTF2E1P29083 439 aaPredicted RBP13.85□□□□□ -0.19
EXOSC1-210ENST00000485122 KIF4BQ2VIQ3 1234 aa13.85□□□□□ -0.19
EXOSC1-210ENST00000485122 NPM2Q86SE8 214 aaKnown RBP13.85□□□□□ -0.19
EXOSC1-210ENST00000485122 SHISA4Q96DD7 197 aa13.85□□□□□ -0.19
EXOSC1-210ENST00000485122 FAM122AQ96E09 287 aa13.85□□□□□ -0.19
EXOSC1-210ENST00000485122 PSMD14O00487 310 aa13.84□□□□□ -0.19
EXOSC1-210ENST00000485122 HOXD11P31277 338 aaPredicted RBP13.84□□□□□ -0.19
EXOSC1-210ENST00000485122 SREBF2Q12772 1141 aa13.84□□□□□ -0.19
EXOSC1-210ENST00000485122 GRIPAP1Q4V328 841 aa13.84□□□□□ -0.19
EXOSC1-210ENST00000485122 TTC5Q8N0Z6 440 aa13.84□□□□□ -0.19
EXOSC1-210ENST00000485122 EFCC1Q9HA90 598 aa13.84□□□□□ -0.19
EXOSC1-210ENST00000485122 PTCH2Q9Y6C5 1203 aa13.84□□□□□ -0.19
EXOSC1-210ENST00000485122 ZSWIM8A7E2V4 1837 aa13.84□□□□□ -0.19
EXOSC1-210ENST00000485122 DUOX1Q9NRD9 1551 aa13.83□□□□□ -0.19
EXOSC1-210ENST00000485122 ZBTB7BO15156 539 aaPredicted RBP13.83□□□□□ -0.2
EXOSC1-210ENST00000485122 HOXA10P31260 410 aaPredicted RBP13.83□□□□□ -0.2
EXOSC1-210ENST00000485122 FKBP1BP68106 108 aa13.83□□□□□ -0.2
EXOSC1-210ENST00000485122 KIAA2012Q0VF49 1180 aa13.83□□□□□ -0.2
EXOSC1-210ENST00000485122 SLC9C1Q4G0N8 1177 aa13.83□□□□□ -0.2
EXOSC1-210ENST00000485122 CLEC4GQ6UXB4 293 aa13.83□□□□□ -0.2
EXOSC1-210ENST00000485122 ERO1AQ96HE7 468 aa13.83□□□□□ -0.2
EXOSC1-210ENST00000485122 SIN3AQ96ST3 1273 aa13.83□□□□□ -0.2
EXOSC1-210ENST00000485122 ZNF652Q9Y2D9 606 aa13.83□□□□□ -0.2
EXOSC1-210ENST00000485122 PRAMEF18Q5VWM3 479 aa13.82□□□□□ -0.2
EXOSC1-210ENST00000485122 SULT6B1Q6IMI4 303 aa13.82□□□□□ -0.2
EXOSC1-210ENST00000485122 ANKRD13DQ6ZTN6 518 aa13.82□□□□□ -0.2
EXOSC1-210ENST00000485122 C3orf67Q6ZVT6 689 aa13.82□□□□□ -0.2
EXOSC1-210ENST00000485122 STAP2Q9UGK3 403 aa13.82□□□□□ -0.2
EXOSC1-210ENST00000485122 KIF7Q2M1P5 1343 aa13.82□□□□□ -0.2
EXOSC1-210ENST00000485122 TAF1P21675 1872 aa13.82□□□□□ -0.2
EXOSC1-210ENST00000485122 SIPA1L3O60292 1781 aaPredicted RBP13.81□□□□□ -0.2
EXOSC1-210ENST00000485122 ANGEL2Q5VTE6 544 aaKnown RBP13.81□□□□□ -0.2
EXOSC1-210ENST00000485122 DPF2Q92785 391 aa13.81□□□□□ -0.2
EXOSC1-210ENST00000485122 RTFDC1Q9BY42 306 aaPredicted RBP13.81□□□□□ -0.2
EXOSC1-210ENST00000485122 VPS33BQ9H267 617 aa13.81□□□□□ -0.2
EXOSC1-210ENST00000485122 TTLL12Q14166 644 aaPredicted RBP13.8□□□□□ -0.2
EXOSC1-210ENST00000485122 HLFQ16534 295 aa13.8□□□□□ -0.2
EXOSC1-210ENST00000485122 SUPT20HQ8NEM7 779 aa13.8□□□□□ -0.2
EXOSC1-210ENST00000485122 SH3TC2Q8TF17 1288 aa13.8□□□□□ -0.2
EXOSC1-210ENST00000485122 LAMB1P07942 1786 aa13.79□□□□□ -0.2
EXOSC1-210ENST00000485122 IGF2BP3O00425 579 aaKnown RBP eCLIP13.79□□□□□ -0.2
EXOSC1-210ENST00000485122 DPP8Q6V1X1 898 aaPredicted RBP13.79□□□□□ -0.2
EXOSC1-210ENST00000485122 RBM17Q96I25 401 aaKnown RBP13.79□□□□□ -0.2
EXOSC1-210ENST00000485122 CRAMP1Q96RY5 1269 aa13.79□□□□□ -0.2
EXOSC1-210ENST00000485122 ATP6V0A2Q9Y487 856 aa13.79□□□□□ -0.2
EXOSC1-210ENST00000485122 SCN9AQ15858 1988 aa13.79□□□□□ -0.2
EXOSC1-210ENST00000485122 ALPK3Q96L96 1907 aa13.78□□□□□ -0.2
EXOSC1-210ENST00000485122 GPR153Q6NV75 609 aa13.78□□□□□ -0.2
EXOSC1-210ENST00000485122 IFNL1Q8IU54 200 aa13.78□□□□□ -0.2
EXOSC1-210ENST00000485122 DBNDD1Q9H9R9 158 aa13.78□□□□□ -0.2
EXOSC1-210ENST00000485122 KCNQ5Q9NR82 932 aa13.78□□□□□ -0.2
EXOSC1-210ENST00000485122 RTL9Q8NET4 1388 aa13.78□□□□□ -0.2
EXOSC1-210ENST00000485122 ZNF646O15015 1829 aaPredicted RBP13.77□□□□□ -0.21
EXOSC1-210ENST00000485122 ALDH1A1P00352 501 aa13.77□□□□□ -0.21
EXOSC1-210ENST00000485122 NUP98P52948 1817 aa13.77□□□□□ -0.21
EXOSC1-210ENST00000485122 CRHR2Q13324 411 aa13.77□□□□□ -0.21
EXOSC1-210ENST00000485122 NBPF11Q86T75 865 aa13.77□□□□□ -0.21
EXOSC1-210ENST00000485122 RPTORQ8N122 1335 aa13.77□□□□□ -0.21
EXOSC1-210ENST00000485122 TEX13AQ9BXU3 409 aaPredicted RBP13.77□□□□□ -0.21
EXOSC1-210ENST00000485122 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.77□□□□□ -0.21
EXOSC1-210ENST00000485122 NR2E3Q9Y5X4 410 aa13.77□□□□□ -0.21
EXOSC1-210ENST00000485122 LAMB2P55268 1798 aa13.76□□□□□ -0.21
EXOSC1-210ENST00000485122 DDX60Q8IY21 1712 aaKnown RBP13.76□□□□□ -0.21
EXOSC1-210ENST00000485122 PTPN12Q05209 780 aaKnown RBP13.76□□□□□ -0.21
EXOSC1-210ENST00000485122 NEUROD1Q13562 356 aa13.76□□□□□ -0.21
EXOSC1-210ENST00000485122 ZNF790Q6PG37 636 aa13.76□□□□□ -0.21
EXOSC1-210ENST00000485122 HTATIP2Q9BUP3 242 aa13.76□□□□□ -0.21
EXOSC1-210ENST00000485122 ABCC4O15439 1325 aa13.75□□□□□ -0.21
EXOSC1-210ENST00000485122 TMEM265A0A087WTH1 108 aa13.75□□□□□ -0.21
EXOSC1-210ENST00000485122 PRKG1Q13976 671 aa13.75□□□□□ -0.21
EXOSC1-210ENST00000485122 SCARF1Q14162 830 aa13.75□□□□□ -0.21
EXOSC1-210ENST00000485122 MTFR1Q15390 333 aa13.75□□□□□ -0.21
EXOSC1-210ENST00000485122 SPRYD7Q5W111 196 aa13.75□□□□□ -0.21
EXOSC1-210ENST00000485122 UBE2Q1Q7Z7E8 422 aa13.75□□□□□ -0.21
EXOSC1-210ENST00000485122 GUCD1Q96NT3 240 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms