RNA–Protein interactions for RNA: ENST00000485065.1

TRUB1-202, Transcript of TruB pseudouridine synthase family member 1, humanhuman

TSL 2

Gene TRUB1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-202ENST00000485065 SOX10P56693 466 aa13.22□□□□□ -0.29
TRUB1-202ENST00000485065 NBPF5PQ86XG9 351 aaPredicted RBP13.22□□□□□ -0.29
TRUB1-202ENST00000485065 PGAP2Q9UHJ9 254 aa13.22□□□□□ -0.29
TRUB1-202ENST00000485065 GJA3Q9Y6H8 435 aa13.22□□□□□ -0.29
TRUB1-202ENST00000485065 HEG1Q9ULI3 1381 aa13.21□□□□□ -0.29
TRUB1-202ENST00000485065 OLFM4Q6UX06 510 aa13.21□□□□□ -0.29
TRUB1-202ENST00000485065 TPTE2Q6XPS3 522 aa13.21□□□□□ -0.29
TRUB1-202ENST00000485065 ZNF496Q96IT1 587 aaPredicted RBP13.21□□□□□ -0.29
TRUB1-202ENST00000485065 ADARB2Q9NS39 739 aaKnown RBP13.21□□□□□ -0.29
TRUB1-202ENST00000485065 BCORQ6W2J9 1755 aa13.21□□□□□ -0.29
TRUB1-202ENST00000485065 VASPP50552 380 aaPredicted RBP13.2□□□□□ -0.3
TRUB1-202ENST00000485065 GSE1Q14687 1217 aa13.2□□□□□ -0.3
TRUB1-202ENST00000485065 DZIP3Q86Y13 1208 aaKnown RBP13.2□□□□□ -0.3
TRUB1-202ENST00000485065 ZC3H15Q8WU90 426 aaKnown RBP13.2□□□□□ -0.3
TRUB1-202ENST00000485065 ZNF330Q9Y3S2 320 aaPredicted RBP13.2□□□□□ -0.3
TRUB1-202ENST00000485065 COL3A1P02461 1466 aaPredicted RBP13.2□□□□□ -0.3
TRUB1-202ENST00000485065 CHRM1P11229 460 aaPredicted RBP13.19□□□□□ -0.3
TRUB1-202ENST00000485065 ZNF790Q6PG37 636 aa13.19□□□□□ -0.3
TRUB1-202ENST00000485065 GPRC5DQ9NZD1 345 aa13.19□□□□□ -0.3
TRUB1-202ENST00000485065 ZNF652Q9Y2D9 606 aa13.19□□□□□ -0.3
TRUB1-202ENST00000485065 A1BGP04217 495 aa13.18□□□□□ -0.3
TRUB1-202ENST00000485065 NBPF15Q8N660 670 aa13.18□□□□□ -0.3
TRUB1-202ENST00000485065 VPS33BQ9H267 617 aa13.18□□□□□ -0.3
TRUB1-202ENST00000485065 COL4A5P29400 1685 aa13.18□□□□□ -0.3
TRUB1-202ENST00000485065 MTHFSDQ2M296 383 aaKnown RBP13.17□□□□□ -0.3
TRUB1-202ENST00000485065 CRY2Q49AN0 593 aa13.17□□□□□ -0.3
TRUB1-202ENST00000485065 C3orf67Q6ZVT6 689 aa13.17□□□□□ -0.3
TRUB1-202ENST00000485065 LARGE2Q8N3Y3 721 aa13.17□□□□□ -0.3
TRUB1-202ENST00000485065 FMNL2Q96PY5 1086 aa13.17□□□□□ -0.3
TRUB1-202ENST00000485065 CDHR2Q9BYE9 1310 aa13.16□□□□□ -0.3
TRUB1-202ENST00000485065 HMOX1P09601 288 aa13.16□□□□□ -0.3
TRUB1-202ENST00000485065 MKRN3Q13064 507 aaKnown RBP13.16□□□□□ -0.3
TRUB1-202ENST00000485065 CNGB1Q14028 1251 aaPredicted RBP13.16□□□□□ -0.3
TRUB1-202ENST00000485065 CDC37L1Q7L3B6 337 aa13.16□□□□□ -0.3
TRUB1-202ENST00000485065 CTU1Q7Z7A3 348 aaKnown RBP13.16□□□□□ -0.3
TRUB1-202ENST00000485065 ZIC5Q96T25 663 aa13.16□□□□□ -0.3
TRUB1-202ENST00000485065 DIAPH1O60610 1272 aaKnown RBP13.15□□□□□ -0.3
TRUB1-202ENST00000485065 PSEN1P49768 467 aa13.15□□□□□ -0.3
TRUB1-202ENST00000485065 PKN2Q16513 984 aaKnown RBP13.15□□□□□ -0.3
TRUB1-202ENST00000485065 NIM1KQ8IY84 436 aa13.15□□□□□ -0.3
TRUB1-202ENST00000485065 CCDC102AQ96A19 550 aa13.15□□□□□ -0.3
TRUB1-202ENST00000485065 GLIS2Q9BZE0 524 aaPredicted RBP13.15□□□□□ -0.3
TRUB1-202ENST00000485065 POTEB3A0JP26 581 aa13.14□□□□□ -0.31
TRUB1-202ENST00000485065 FAM155AB1AL88 458 aaPredicted RBP13.14□□□□□ -0.31
TRUB1-202ENST00000485065 HOXA10P31260 410 aaPredicted RBP13.14□□□□□ -0.31
TRUB1-202ENST00000485065 HUNKP57058 714 aa13.14□□□□□ -0.31
TRUB1-202ENST00000485065 TEFQ10587 303 aa13.14□□□□□ -0.31
TRUB1-202ENST00000485065 POTEBQ6S5H4 581 aa13.14□□□□□ -0.31
TRUB1-202ENST00000485065 NIP7Q9Y221 180 aaKnown RBP eCLIP13.14□□□□□ -0.31
TRUB1-202ENST00000485065 HABP4Q5JVS0 413 aaKnown RBP13.13□□□□□ -0.31
TRUB1-202ENST00000485065 RGMBQ6NW40 437 aa13.13□□□□□ -0.31
TRUB1-202ENST00000485065 RNF186Q9NXI6 227 aa13.13□□□□□ -0.31
TRUB1-202ENST00000485065 AKAP11Q9UKA4 1901 aa13.13□□□□□ -0.31
TRUB1-202ENST00000485065 PPP2R1AP30153 589 aa13.12□□□□□ -0.31
TRUB1-202ENST00000485065 GOLGA2Q08379 1002 aa13.12□□□□□ -0.31
TRUB1-202ENST00000485065 IL17REQ8NFR9 667 aa13.12□□□□□ -0.31
TRUB1-202ENST00000485065 ZNF408Q9H9D4 720 aa13.12□□□□□ -0.31
TRUB1-202ENST00000485065 HPS5Q9UPZ3 1129 aa13.12□□□□□ -0.31
TRUB1-202ENST00000485065 TRPA1O75762 1119 aa13.11□□□□□ -0.31
TRUB1-202ENST00000485065 GTF2E1P29083 439 aaPredicted RBP13.11□□□□□ -0.31
TRUB1-202ENST00000485065 HIRAP54198 1017 aaPredicted RBP13.11□□□□□ -0.31
TRUB1-202ENST00000485065 EMP3P54852 163 aa13.11□□□□□ -0.31
TRUB1-202ENST00000485065 KIF23Q02241 960 aaPredicted RBP13.11□□□□□ -0.31
TRUB1-202ENST00000485065 CXCL9Q07325 125 aa13.11□□□□□ -0.31
TRUB1-202ENST00000485065 CRAMP1Q96RY5 1269 aa13.11□□□□□ -0.31
TRUB1-202ENST00000485065 NYXQ9GZU5 481 aa13.11□□□□□ -0.31
TRUB1-202ENST00000485065 ZNRF3Q9ULT6 936 aa13.11□□□□□ -0.31
TRUB1-202ENST00000485065 SIPA1L3O60292 1781 aaPredicted RBP13.1□□□□□ -0.31
TRUB1-202ENST00000485065 PPIP5K2O43314 1243 aa13.1□□□□□ -0.31
TRUB1-202ENST00000485065 GMPSP49915 693 aaPredicted RBP13.1□□□□□ -0.31
TRUB1-202ENST00000485065 KRTAP3-3Q9BYR6 98 aa13.1□□□□□ -0.31
TRUB1-202ENST00000485065 KRTAP3-2Q9BYR7 98 aa13.1□□□□□ -0.31
TRUB1-202ENST00000485065 USP16Q9Y5T5 823 aa13.1□□□□□ -0.31
TRUB1-202ENST00000485065 RIC1Q4ADV7 1423 aa13.1□□□□□ -0.31
TRUB1-202ENST00000485065 GNAT3A8MTJ3 354 aa13.09□□□□□ -0.31
TRUB1-202ENST00000485065 C2orf69Q8N8R5 385 aa13.09□□□□□ -0.31
TRUB1-202ENST00000485065 RPGRQ92834 1020 aaKnown RBP13.09□□□□□ -0.31
TRUB1-202ENST00000485065 PHACTR3Q96KR7 559 aa13.09□□□□□ -0.31
TRUB1-202ENST00000485065 RTFDC1Q9BY42 306 aaPredicted RBP13.09□□□□□ -0.31
TRUB1-202ENST00000485065 CEMIPQ8WUJ3 1361 aa13.08□□□□□ -0.31
TRUB1-202ENST00000485065 TNIP1Q15025 636 aa13.08□□□□□ -0.32
TRUB1-202ENST00000485065 SUPT20HQ8NEM7 779 aa13.08□□□□□ -0.32
TRUB1-202ENST00000485065 GAS2L2Q8NHY3 880 aa13.08□□□□□ -0.32
TRUB1-202ENST00000485065 RBM17Q96I25 401 aaKnown RBP13.08□□□□□ -0.32
TRUB1-202ENST00000485065 CSRNP1Q96S65 589 aa13.08□□□□□ -0.32
TRUB1-202ENST00000485065 GBA2Q9HCG7 927 aaPredicted RBP13.08□□□□□ -0.32
TRUB1-202ENST00000485065 SNRPA1P09661 255 aaKnown RBP13.07□□□□□ -0.32
TRUB1-202ENST00000485065 ZNF157P51786 506 aaPredicted RBP13.07□□□□□ -0.32
TRUB1-202ENST00000485065 AOC3Q16853 763 aa13.07□□□□□ -0.32
TRUB1-202ENST00000485065 USP48Q86UV5 1035 aa13.07□□□□□ -0.32
TRUB1-202ENST00000485065 BCL2L13Q9BXK5 485 aa13.07□□□□□ -0.32
TRUB1-202ENST00000485065 RSPH6AQ9H0K4 717 aa13.07□□□□□ -0.32
TRUB1-202ENST00000485065 TMX4Q9H1E5 349 aaPredicted RBP13.07□□□□□ -0.32
TRUB1-202ENST00000485065 IBTKQ9P2D0 1353 aaPredicted RBP13.07□□□□□ -0.32
TRUB1-202ENST00000485065 FAM177BA6PVY3 158 aa13.06□□□□□ -0.32
TRUB1-202ENST00000485065 BTBD11A6QL63 1104 aa13.06□□□□□ -0.32
TRUB1-202ENST00000485065 H7C1D1 291 aa13.06□□□□□ -0.32
TRUB1-202ENST00000485065 PPEF1O14829 653 aaPredicted RBP13.06□□□□□ -0.32
TRUB1-202ENST00000485065 U2SURPO15042 1029 aaKnown RBP13.06□□□□□ -0.32
TRUB1-202ENST00000485065 SLC10A3P09131 477 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms