RNA–Protein interactions for RNA: ENST00000484968.1

NEB-213, Transcript of nebulin, humanhuman

TSL 4

Gene NEB, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-213ENST00000484968 C10orf71Q711Q0 1435 aa11.74□□□□□ -0.53
NEB-213ENST00000484968 NEFLP07196 543 aa11.73□□□□□ -0.53
NEB-213ENST00000484968 GTF2E1P29083 439 aaPredicted RBP11.73□□□□□ -0.53
NEB-213ENST00000484968 CRY2Q49AN0 593 aa11.73□□□□□ -0.53
NEB-213ENST00000484968 SSH3Q8TE77 659 aa11.73□□□□□ -0.53
NEB-213ENST00000484968 ZNF594Q96JF6 807 aaPredicted RBP11.73□□□□□ -0.53
NEB-213ENST00000484968 BRIP1Q9BX63 1249 aa11.73□□□□□ -0.53
NEB-213ENST00000484968 PA2G4Q9UQ80 394 aaKnown RBP11.73□□□□□ -0.53
NEB-213ENST00000484968 LAMB2P55268 1798 aa11.72□□□□□ -0.53
NEB-213ENST00000484968 KCNA3P22001 575 aa11.72□□□□□ -0.53
NEB-213ENST00000484968 CHRNA5P30532 468 aa11.72□□□□□ -0.53
NEB-213ENST00000484968 PTPN12Q05209 780 aaKnown RBP11.72□□□□□ -0.53
NEB-213ENST00000484968 SRGAP3O43295 1099 aa11.71□□□□□ -0.53
NEB-213ENST00000484968 ST5P78524 1137 aa11.71□□□□□ -0.53
NEB-213ENST00000484968 B4GALNT3Q6L9W6 998 aa11.71□□□□□ -0.53
NEB-213ENST00000484968 RPAP2Q8IXW5 612 aaPredicted RBP11.71□□□□□ -0.53
NEB-213ENST00000484968 CELF1Q92879 486 aaKnown RBP11.71□□□□□ -0.53
NEB-213ENST00000484968 NLRP3Q96P20 1036 aa11.71□□□□□ -0.53
NEB-213ENST00000484968 PUS3Q9BZE2 481 aaKnown RBP11.71□□□□□ -0.53
NEB-213ENST00000484968 KIAA1551Q9HCM1 1747 aa11.71□□□□□ -0.54
NEB-213ENST00000484968 RTL9Q8NET4 1388 aa11.7□□□□□ -0.54
NEB-213ENST00000484968 COL11A2P13942 1736 aaPredicted RBP11.7□□□□□ -0.54
NEB-213ENST00000484968 WTIPA6NIX2 430 aaPredicted RBP11.7□□□□□ -0.54
NEB-213ENST00000484968 SRGNP10124 158 aa11.7□□□□□ -0.54
NEB-213ENST00000484968 ITGA6P23229 1130 aa11.7□□□□□ -0.54
NEB-213ENST00000484968 HOXA10P31260 410 aaPredicted RBP11.7□□□□□ -0.54
NEB-213ENST00000484968 HDAC1Q13547 482 aaPredicted RBP11.7□□□□□ -0.54
NEB-213ENST00000484968 AAMPQ13685 434 aa11.7□□□□□ -0.54
NEB-213ENST00000484968 SPON1Q9HCB6 807 aa11.7□□□□□ -0.54
NEB-213ENST00000484968 TAF1P21675 1872 aa11.7□□□□□ -0.54
NEB-213ENST00000484968 KDM2BQ8NHM5 1336 aa11.69□□□□□ -0.54
NEB-213ENST00000484968 A0A0G2JLW4 131 aa11.69□□□□□ -0.54
NEB-213ENST00000484968 DPEP1P16444 411 aa11.69□□□□□ -0.54
NEB-213ENST00000484968 POLD1P28340 1107 aa11.69□□□□□ -0.54
NEB-213ENST00000484968 LRRC24Q50LG9 513 aa11.69□□□□□ -0.54
NEB-213ENST00000484968 ERICH6BQ5W0A0 696 aa11.69□□□□□ -0.54
NEB-213ENST00000484968 ATG9AQ7Z3C6 839 aa11.69□□□□□ -0.54
NEB-213ENST00000484968 NLGN2Q8NFZ4 835 aa11.69□□□□□ -0.54
NEB-213ENST00000484968 CHMP4BQ9H444 224 aaKnown RBP11.69□□□□□ -0.54
NEB-213ENST00000484968 COPRSQ9NQ92 184 aa11.69□□□□□ -0.54
NEB-213ENST00000484968 GOLGB1Q14789 3259 aaKnown RBP11.68□□□□□ -0.54
NEB-213ENST00000484968 NPHP1O15259 732 aa11.68□□□□□ -0.54
NEB-213ENST00000484968 SASH1O94885 1247 aa11.68□□□□□ -0.54
NEB-213ENST00000484968 CCDC152Q4G0S7 254 aa11.68□□□□□ -0.54
NEB-213ENST00000484968 OLFM4Q6UX06 510 aa11.68□□□□□ -0.54
NEB-213ENST00000484968 SKAP1Q86WV1 359 aa11.68□□□□□ -0.54
NEB-213ENST00000484968 C2CD5Q86YS7 1000 aa11.68□□□□□ -0.54
NEB-213ENST00000484968 DCTPP1Q9H773 170 aa11.68□□□□□ -0.54
NEB-213ENST00000484968 PPP4R2Q9NY27 417 aa11.68□□□□□ -0.54
NEB-213ENST00000484968 EXOC6BQ9Y2D4 811 aa11.68□□□□□ -0.54
NEB-213ENST00000484968 NOP58Q9Y2X3 529 aaKnown RBP11.68□□□□□ -0.54
NEB-213ENST00000484968 CHMP3Q9Y3E7 222 aa11.68□□□□□ -0.54
NEB-213ENST00000484968 LRP5O75197 1615 aa11.68□□□□□ -0.54
NEB-213ENST00000484968 KIF13BQ9NQT8 1826 aa11.67□□□□□ -0.54
NEB-213ENST00000484968 PDE6BP35913 854 aa11.67□□□□□ -0.54
NEB-213ENST00000484968 IFIT5Q13325 482 aaKnown RBP11.67□□□□□ -0.54
NEB-213ENST00000484968 SMC5Q8IY18 1101 aa11.67□□□□□ -0.54
NEB-213ENST00000484968 SIL1Q9H173 461 aa11.67□□□□□ -0.54
NEB-213ENST00000484968 RIPOR2Q9Y4F9 1068 aa11.67□□□□□ -0.54
NEB-213ENST00000484968 ANKRD18BA2A2Z9 1011 aa11.66□□□□□ -0.54
NEB-213ENST00000484968 SNAP23O00161 211 aa11.66□□□□□ -0.54
NEB-213ENST00000484968 SURF6O75683 361 aaKnown RBP11.66□□□□□ -0.54
NEB-213ENST00000484968 NPR1P16066 1061 aa11.66□□□□□ -0.54
NEB-213ENST00000484968 CCDC57Q2TAC2 916 aa11.66□□□□□ -0.54
NEB-213ENST00000484968 C7orf43Q8WVR3 580 aa11.66□□□□□ -0.54
NEB-213ENST00000484968 CRAMP1Q96RY5 1269 aa11.66□□□□□ -0.54
NEB-213ENST00000484968 FHDC1Q9C0D6 1143 aaPredicted RBP11.66□□□□□ -0.54
NEB-213ENST00000484968 HDAC5Q9UQL6 1122 aa11.66□□□□□ -0.54
NEB-213ENST00000484968 CD2APQ9Y5K6 639 aa11.66□□□□□ -0.54
NEB-213ENST00000484968 MYH3P11055 1940 aa11.65□□□□□ -0.54
NEB-213ENST00000484968 H0YIN7 160 aa11.65□□□□□ -0.54
NEB-213ENST00000484968 EYA2O00167 538 aa11.65□□□□□ -0.54
NEB-213ENST00000484968 SMARCA5O60264 1052 aaPredicted RBP11.65□□□□□ -0.54
NEB-213ENST00000484968 RPS8P62241 208 aaKnown RBP11.65□□□□□ -0.54
NEB-213ENST00000484968 GRAPQ13588 217 aa11.65□□□□□ -0.54
NEB-213ENST00000484968 VGLL2Q8N8G2 317 aa11.65□□□□□ -0.54
NEB-213ENST00000484968 GRAPLQ8TC17 118 aaPredicted RBP11.65□□□□□ -0.54
NEB-213ENST00000484968 RPGRQ92834 1020 aaKnown RBP11.65□□□□□ -0.54
NEB-213ENST00000484968 MASTLQ96GX5 879 aa11.65□□□□□ -0.54
NEB-213ENST00000484968 PPP1R1BQ9UD71 204 aaPredicted RBP11.65□□□□□ -0.54
NEB-213ENST00000484968 WWC3Q9ULE0 1092 aa11.65□□□□□ -0.54
NEB-213ENST00000484968 HSP90B1P14625 803 aaKnown RBP11.64□□□□□ -0.55
NEB-213ENST00000484968 TGFB2P61812 414 aa11.64□□□□□ -0.55
NEB-213ENST00000484968 STYK1Q6J9G0 422 aa11.64□□□□□ -0.55
NEB-213ENST00000484968 LDHAL6AQ6ZMR3 332 aa11.64□□□□□ -0.55
NEB-213ENST00000484968 DDX46Q7L014 1031 aaKnown RBP11.64□□□□□ -0.55
NEB-213ENST00000484968 KLHL34Q8N239 644 aa11.64□□□□□ -0.55
NEB-213ENST00000484968 HELBQ8NG08 1087 aaPredicted RBP11.64□□□□□ -0.55
NEB-213ENST00000484968 RBM17Q96I25 401 aaKnown RBP11.64□□□□□ -0.55
NEB-213ENST00000484968 CCDC136Q96JN2 1154 aa11.64□□□□□ -0.55
NEB-213ENST00000484968 RWDD1Q9H446 243 aaPredicted RBP11.64□□□□□ -0.55
NEB-213ENST00000484968 MINPP1Q9UNW1 487 aa11.64□□□□□ -0.55
NEB-213ENST00000484968 SNED1Q8TER0 1413 aa11.63□□□□□ -0.55
NEB-213ENST00000484968 APBB1O00213 710 aa11.63□□□□□ -0.55
NEB-213ENST00000484968 HMMRO75330 724 aa11.63□□□□□ -0.55
NEB-213ENST00000484968 TAF5LO75529 589 aa11.63□□□□□ -0.55
NEB-213ENST00000484968 TFCP2Q12800 502 aa11.63□□□□□ -0.55
NEB-213ENST00000484968 PRPF40BQ6NWY9 871 aaKnown RBP11.63□□□□□ -0.55
NEB-213ENST00000484968 ANKRD18AQ8IVF6 992 aa11.63□□□□□ -0.55
NEB-213ENST00000484968 C16orf71Q8IYS4 520 aaPredicted RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms