RNA–Protein interactions for RNA: ENST00000484822.1

RXRA-203, Transcript of retinoid X receptor alpha, humanhuman

TSL 2

Gene RXRA, Length 5,215 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-203ENST00000484822 GOLGA8BA8MQT2 603 aa17.39■□□□□ 0.37
RXRA-203ENST00000484822 FLIIQ13045 1269 aa17.39■□□□□ 0.37
RXRA-203ENST00000484822 C10orf67Q8IYJ2 551 aa17.39■□□□□ 0.37
RXRA-203ENST00000484822 ZNF287Q9HBT7 754 aa17.39■□□□□ 0.37
RXRA-203ENST00000484822 LRP2BPQ9P2M1 347 aa17.39■□□□□ 0.37
RXRA-203ENST00000484822 FLT4P35916 1363 aa17.39■□□□□ 0.37
RXRA-203ENST00000484822 ALS2CR12Q96Q35 445 aa17.39■□□□□ 0.37
RXRA-203ENST00000484822 TMCO5BA8MYB1 307 aa17.38■□□□□ 0.37
RXRA-203ENST00000484822 DNAJC25Q9H1X3 360 aa17.38■□□□□ 0.37
RXRA-203ENST00000484822 MBIPQ9NS73 344 aa17.38■□□□□ 0.37
RXRA-203ENST00000484822 HMGB1P09429 215 aaKnown RBP17.38■□□□□ 0.37
RXRA-203ENST00000484822 UBASH3AP57075 661 aa17.38■□□□□ 0.37
RXRA-203ENST00000484822 NECAB1Q8N987 351 aa17.38■□□□□ 0.37
RXRA-203ENST00000484822 NCKAP5LQ9HCH0 1330 aa17.38■□□□□ 0.37
RXRA-203ENST00000484822 USP5P45974 858 aa17.38■□□□□ 0.37
RXRA-203ENST00000484822 SPECC1LQ69YQ0 1117 aa17.38■□□□□ 0.37
RXRA-203ENST00000484822 VPS36Q86VN1 386 aa17.38■□□□□ 0.37
RXRA-203ENST00000484822 ZSCAN29Q8IWY8 852 aaPredicted RBP17.38■□□□□ 0.37
RXRA-203ENST00000484822 AKAP2Q9Y2D5 859 aa17.38■□□□□ 0.37
RXRA-203ENST00000484822 MACROD2A1Z1Q3 448 aa17.38■□□□□ 0.37
RXRA-203ENST00000484822 HS1BP3Q53T59 392 aa17.38■□□□□ 0.37
RXRA-203ENST00000484822 DACT1Q9NYF0 836 aa17.38■□□□□ 0.37
RXRA-203ENST00000484822 POLKQ9UBT6 870 aa17.38■□□□□ 0.37
RXRA-203ENST00000484822 BICDL1Q6ZP65 573 aa17.37■□□□□ 0.37
RXRA-203ENST00000484822 HSPA4P34932 840 aa17.37■□□□□ 0.37
RXRA-203ENST00000484822 MTIF2P46199 727 aaKnown RBP17.37■□□□□ 0.37
RXRA-203ENST00000484822 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.37■□□□□ 0.373e-7■■■□□ 18.8
RXRA-203ENST00000484822 ZFYVE9O95405 1425 aa17.37■□□□□ 0.37
RXRA-203ENST00000484822 A0A087WZG4 1122 aa17.37■□□□□ 0.37
RXRA-203ENST00000484822 CTAGE15A4D2H0 777 aa17.37■□□□□ 0.37
RXRA-203ENST00000484822 CTAGE8P0CG41 777 aa17.37■□□□□ 0.37
RXRA-203ENST00000484822 CTAGE6Q86UF2 777 aa17.37■□□□□ 0.37
RXRA-203ENST00000484822 CTAGE4Q8IX94 777 aa17.37■□□□□ 0.37
RXRA-203ENST00000484822 MYO5CQ9NQX4 1742 aa17.37■□□□□ 0.37
RXRA-203ENST00000484822 PHACTR2O75167 634 aa17.37■□□□□ 0.37
RXRA-203ENST00000484822 ATRIPQ8WXE1 791 aa17.37■□□□□ 0.37
RXRA-203ENST00000484822 CTNNBL1Q8WYA6 563 aaPredicted RBP17.37■□□□□ 0.37
RXRA-203ENST00000484822 FBLN1P23142 703 aa17.36■□□□□ 0.37
RXRA-203ENST00000484822 SMAP1Q8IYB5 467 aaPredicted RBP17.36■□□□□ 0.37
RXRA-203ENST00000484822 PTGS1P23219 599 aa17.36■□□□□ 0.37
RXRA-203ENST00000484822 ABCF2Q9UG63 623 aa17.36■□□□□ 0.37
RXRA-203ENST00000484822 CETN2P41208 172 aa17.36■□□□□ 0.37
RXRA-203ENST00000484822 CEP112Q8N8E3 955 aa17.36■□□□□ 0.37
RXRA-203ENST00000484822 MINDY4BA8MYZ0 360 aa17.36■□□□□ 0.37
RXRA-203ENST00000484822 MPHOSPH10O00566 681 aaKnown RBP17.36■□□□□ 0.37
RXRA-203ENST00000484822 HSF2BPO75031 334 aa17.36■□□□□ 0.37
RXRA-203ENST00000484822 PRPF4BQ13523 1007 aaKnown RBP17.36■□□□□ 0.37
RXRA-203ENST00000484822 PPP1R12BO60237 982 aaPredicted RBP17.35■□□□□ 0.37
RXRA-203ENST00000484822 IFIT1P09914 478 aaKnown RBP17.35■□□□□ 0.37
RXRA-203ENST00000484822 HSPA2P54652 639 aa17.35■□□□□ 0.37
RXRA-203ENST00000484822 EIF4A2Q14240 407 aaKnown RBP17.35■□□□□ 0.37
RXRA-203ENST00000484822 PIK3R4Q99570 1358 aa17.35■□□□□ 0.37
RXRA-203ENST00000484822 FAM83GA6ND36 823 aa17.35■□□□□ 0.37
RXRA-203ENST00000484822 SNRPA1P09661 255 aaKnown RBP17.35■□□□□ 0.37
RXRA-203ENST00000484822 CCDC102BQ68D86 513 aa17.35■□□□□ 0.37
RXRA-203ENST00000484822 SLF2Q8IX21 1173 aa17.35■□□□□ 0.37
RXRA-203ENST00000484822 A0A1W2PP64 1363 aa17.35■□□□□ 0.37
RXRA-203ENST00000484822 SDSP20132 328 aa17.35■□□□□ 0.37
RXRA-203ENST00000484822 METTL24Q5JXM2 366 aa17.35■□□□□ 0.37
RXRA-203ENST00000484822 RAB11FIP4Q86YS3 637 aa17.35■□□□□ 0.37
RXRA-203ENST00000484822 TSG101Q99816 390 aa17.35■□□□□ 0.37
RXRA-203ENST00000484822 N4BP3O15049 544 aa17.35■□□□□ 0.37
RXRA-203ENST00000484822 CEP57Q86XR8 500 aa17.35■□□□□ 0.37
RXRA-203ENST00000484822 UBA5Q9GZZ9 404 aa17.35■□□□□ 0.37
RXRA-203ENST00000484822 CCDC196A0A1B0GTZ2 297 aa17.34■□□□□ 0.37
RXRA-203ENST00000484822 RAB3GAP1Q15042 981 aa17.34■□□□□ 0.37
RXRA-203ENST00000484822 OGFRQ9NZT2 677 aa17.34■□□□□ 0.37
RXRA-203ENST00000484822 MYO1BO43795 1136 aa17.34■□□□□ 0.37
RXRA-203ENST00000484822 NUCB1Q02818 461 aa17.34■□□□□ 0.37
RXRA-203ENST00000484822 GIGYF2Q6Y7W6 1299 aaKnown RBP17.34■□□□□ 0.37
RXRA-203ENST00000484822 AOPEPQ8N6M6 819 aa17.34■□□□□ 0.37
RXRA-203ENST00000484822 ZCRB1Q8TBF4 217 aaKnown RBP17.34■□□□□ 0.37
RXRA-203ENST00000484822 TCEANC2Q96MN5 208 aa17.34■□□□□ 0.37
RXRA-203ENST00000484822 ORC3Q9UBD5 711 aaPredicted RBP17.34■□□□□ 0.37
RXRA-203ENST00000484822 USP16Q9Y5T5 823 aa17.34■□□□□ 0.37
RXRA-203ENST00000484822 PIK3C2GO75747 1445 aa17.34■□□□□ 0.37
RXRA-203ENST00000484822 DNM1Q05193 864 aaKnown RBP17.34■□□□□ 0.37
RXRA-203ENST00000484822 GTF3C6Q969F1 213 aa17.34■□□□□ 0.37
RXRA-203ENST00000484822 VPS18Q9P253 973 aa17.34■□□□□ 0.37
RXRA-203ENST00000484822 SNX21Q969T3 373 aa17.34■□□□□ 0.37
RXRA-203ENST00000484822 NAPBQ9H115 298 aa17.34■□□□□ 0.37
RXRA-203ENST00000484822 SLC12A7Q9Y666 1083 aa17.34■□□□□ 0.37
RXRA-203ENST00000484822 ADGBQ8N7X0 1667 aa17.34■□□□□ 0.37
RXRA-203ENST00000484822 NOP2P46087 812 aaKnown RBP17.34■□□□□ 0.37
RXRA-203ENST00000484822 TTC31Q49AM3 519 aaPredicted RBP17.34■□□□□ 0.37
RXRA-203ENST00000484822 NBPF14Q5TI25 921 aa17.34■□□□□ 0.37
RXRA-203ENST00000484822 COL17A1Q9UMD9 1497 aaPredicted RBP17.33■□□□□ 0.37
RXRA-203ENST00000484822 PAXIP1Q6ZW49 1069 aaPredicted RBP17.33■□□□□ 0.37
RXRA-203ENST00000484822 RPGRQ92834 1020 aaKnown RBP17.33■□□□□ 0.37
RXRA-203ENST00000484822 GOLGA8AA7E2F4 631 aa17.33■□□□□ 0.36
RXRA-203ENST00000484822 ZNF76P36508 570 aa17.33■□□□□ 0.36
RXRA-203ENST00000484822 AKAP4Q5JQC9 854 aa17.33■□□□□ 0.36
RXRA-203ENST00000484822 MBD5Q9P267 1494 aa17.33■□□□□ 0.36
RXRA-203ENST00000484822 ZNF213O14771 459 aa17.33■□□□□ 0.36
RXRA-203ENST00000484822 U2AF2P26368 475 aaKnown RBP eCLIP17.33■□□□□ 0.36
RXRA-203ENST00000484822 PHAXQ9H814 394 aaKnown RBP17.33■□□□□ 0.36
RXRA-203ENST00000484822 ECHDC1Q9NTX5 307 aa17.33■□□□□ 0.36
RXRA-203ENST00000484822 SYT1P21579 422 aa17.33■□□□□ 0.36
RXRA-203ENST00000484822 IFIT5Q13325 482 aaKnown RBP17.33■□□□□ 0.36
RXRA-203ENST00000484822 FEZ1Q99689 392 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms