RNA–Protein interactions for RNA: ENST00000484752.5

RFTN1-210, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 4

Gene RFTN1, Length 513 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-210ENST00000484752 CSF1RP07333 972 aa14.35□□□□□ -0.11
RFTN1-210ENST00000484752 HCLS1P14317 486 aaPredicted RBP14.35□□□□□ -0.11
RFTN1-210ENST00000484752 POLD1P28340 1107 aa14.35□□□□□ -0.11
RFTN1-210ENST00000484752 G3BP1Q13283 466 aaKnown RBP eCLIP14.35□□□□□ -0.11
RFTN1-210ENST00000484752 EPHA10Q5JZY3 1008 aa14.35□□□□□ -0.11
RFTN1-210ENST00000484752 MSL1Q68DK7 614 aa14.35□□□□□ -0.11
RFTN1-210ENST00000484752 PRR5LQ6MZQ0 368 aa14.35□□□□□ -0.11
RFTN1-210ENST00000484752 FBXO3Q9UK99 471 aa14.35□□□□□ -0.11
RFTN1-210ENST00000484752 LAMB2P55268 1798 aa14.34□□□□□ -0.11
RFTN1-210ENST00000484752 DDR1Q08345 913 aa14.34□□□□□ -0.11
RFTN1-210ENST00000484752 R3HDM1Q15032 1099 aaKnown RBP14.34□□□□□ -0.11
RFTN1-210ENST00000484752 SMC5Q8IY18 1101 aa14.34□□□□□ -0.11
RFTN1-210ENST00000484752 TTLL11Q8NHH1 800 aa14.34□□□□□ -0.11
RFTN1-210ENST00000484752 CDC5LQ99459 802 aaKnown RBP14.34□□□□□ -0.11
RFTN1-210ENST00000484752 MTFR1LQ9H019 292 aa14.34□□□□□ -0.11
RFTN1-210ENST00000484752 RTL9Q8NET4 1388 aa14.34□□□□□ -0.11
RFTN1-210ENST00000484752 ITGA6P23229 1130 aa14.33□□□□□ -0.12
RFTN1-210ENST00000484752 PDE6BP35913 854 aa14.33□□□□□ -0.12
RFTN1-210ENST00000484752 IGHMBP2P38935 993 aaKnown RBP14.33□□□□□ -0.12
RFTN1-210ENST00000484752 SF3B3Q15393 1217 aaKnown RBP14.33□□□□□ -0.12
RFTN1-210ENST00000484752 FAM161AQ3B820 660 aa14.33□□□□□ -0.12
RFTN1-210ENST00000484752 PELP1Q8IZL8 1130 aaKnown RBP14.33□□□□□ -0.12
RFTN1-210ENST00000484752 SYNE4Q8N205 404 aa14.33□□□□□ -0.12
RFTN1-210ENST00000484752 COPRSQ9NQ92 184 aa14.33□□□□□ -0.12
RFTN1-210ENST00000484752 PDZRN3Q9UPQ7 1066 aa14.33□□□□□ -0.12
RFTN1-210ENST00000484752 ABCC12Q96J65 1359 aa14.33□□□□□ -0.12
RFTN1-210ENST00000484752 DDX46Q7L014 1031 aaKnown RBP14.32□□□□□ -0.12
RFTN1-210ENST00000484752 RPGRQ92834 1020 aaKnown RBP14.32□□□□□ -0.12
RFTN1-210ENST00000484752 KIF1BPQ96EK5 621 aa14.32□□□□□ -0.12
RFTN1-210ENST00000484752 MPHOSPH8Q99549 860 aa14.32□□□□□ -0.12
RFTN1-210ENST00000484752 BRIP1Q9BX63 1249 aa14.32□□□□□ -0.12
RFTN1-210ENST00000484752 LRRCC1Q9C099 1032 aa14.32□□□□□ -0.12
RFTN1-210ENST00000484752 EXOC6BQ9Y2D4 811 aa14.32□□□□□ -0.12
RFTN1-210ENST00000484752 NOP58Q9Y2X3 529 aaKnown RBP14.32□□□□□ -0.12
RFTN1-210ENST00000484752 CIAO1O76071 339 aa14.31□□□□□ -0.12
RFTN1-210ENST00000484752 ANKRD45Q5TZF3 282 aa14.31□□□□□ -0.12
RFTN1-210ENST00000484752 CCDC85AQ96PX6 553 aaPredicted RBP14.31□□□□□ -0.12
RFTN1-210ENST00000484752 GREM2Q9H772 168 aa14.31□□□□□ -0.12
RFTN1-210ENST00000484752 IL15P40933 162 aaPredicted RBP14.3□□□□□ -0.12
RFTN1-210ENST00000484752 RFX5P48382 616 aaPredicted RBP14.3□□□□□ -0.12
RFTN1-210ENST00000484752 NUCB1Q02818 461 aa14.3□□□□□ -0.12
RFTN1-210ENST00000484752 PTPN12Q05209 780 aaKnown RBP14.3□□□□□ -0.12
RFTN1-210ENST00000484752 CHD1LQ86WJ1 897 aa14.3□□□□□ -0.12
RFTN1-210ENST00000484752 ANKRD18AQ8IVF6 992 aa14.3□□□□□ -0.12
RFTN1-210ENST00000484752 RBM17Q96I25 401 aaKnown RBP14.3□□□□□ -0.12
RFTN1-210ENST00000484752 SIL1Q9H173 461 aa14.3□□□□□ -0.12
RFTN1-210ENST00000484752 CNNM1Q9NRU3 951 aa14.3□□□□□ -0.12
RFTN1-210ENST00000484752 MYH3P11055 1940 aa14.3□□□□□ -0.12
RFTN1-210ENST00000484752 DDX60Q8IY21 1712 aaKnown RBP14.29□□□□□ -0.12
RFTN1-210ENST00000484752 EYA2O00167 538 aa14.29□□□□□ -0.12
RFTN1-210ENST00000484752 APBB1O00213 710 aa14.29□□□□□ -0.12
RFTN1-210ENST00000484752 LDHAL6AQ6ZMR3 332 aa14.29□□□□□ -0.12
RFTN1-210ENST00000484752 CLASRPQ8N2M8 674 aaKnown RBP14.29□□□□□ -0.12
RFTN1-210ENST00000484752 PA2G4Q9UQ80 394 aaKnown RBP14.29□□□□□ -0.12
RFTN1-210ENST00000484752 ZBTB7AO95365 584 aa14.28□□□□□ -0.12
RFTN1-210ENST00000484752 CRY2Q49AN0 593 aa14.28□□□□□ -0.12
RFTN1-210ENST00000484752 MROH5Q6ZUA9 1318 aa14.28□□□□□ -0.12
RFTN1-210ENST00000484752 CCDC24Q8N4L8 307 aa14.28□□□□□ -0.12
RFTN1-210ENST00000484752 RHPN1Q8TCX5 695 aa14.28□□□□□ -0.12
RFTN1-210ENST00000484752 TMX4Q9H1E5 349 aaPredicted RBP14.28□□□□□ -0.12
RFTN1-210ENST00000484752 NRXN2Q9P2S2 1712 aa14.28□□□□□ -0.12
RFTN1-210ENST00000484752 PSDA5PKW4 1024 aaPredicted RBP14.27□□□□□ -0.13
RFTN1-210ENST00000484752 TMC4Q7Z404 712 aa14.27□□□□□ -0.13
RFTN1-210ENST00000484752 KLHDC4Q8TBB5 520 aa14.27□□□□□ -0.13
RFTN1-210ENST00000484752 CEP126Q9P2H0 1117 aa14.27□□□□□ -0.13
RFTN1-210ENST00000484752 AKAP2Q9Y2D5 859 aa14.27□□□□□ -0.13
RFTN1-210ENST00000484752 CASZ1Q86V15 1759 aa14.27□□□□□ -0.13
RFTN1-210ENST00000484752 KLRG2A4D1S0 409 aaPredicted RBP14.26□□□□□ -0.13
RFTN1-210ENST00000484752 H0YIN7 160 aa14.26□□□□□ -0.13
RFTN1-210ENST00000484752 NPR1P16066 1061 aa14.26□□□□□ -0.13
RFTN1-210ENST00000484752 ALDH1B1P30837 517 aa14.26□□□□□ -0.13
RFTN1-210ENST00000484752 GRAPQ13588 217 aa14.26□□□□□ -0.13
RFTN1-210ENST00000484752 METTL24Q5JXM2 366 aa14.26□□□□□ -0.13
RFTN1-210ENST00000484752 GRAPLQ8TC17 118 aaPredicted RBP14.26□□□□□ -0.13
RFTN1-210ENST00000484752 GPATCH3Q96I76 525 aa14.26□□□□□ -0.13
RFTN1-210ENST00000484752 LNPKQ9C0E8 428 aa14.26□□□□□ -0.13
RFTN1-210ENST00000484752 PDGFDQ9GZP0 370 aaPredicted RBP14.26□□□□□ -0.13
RFTN1-210ENST00000484752 IFIT2P09913 472 aaKnown RBP14.25□□□□□ -0.13
RFTN1-210ENST00000484752 RPS8P62241 208 aaKnown RBP14.25□□□□□ -0.13
RFTN1-210ENST00000484752 C3orf67Q6ZVT6 689 aa14.25□□□□□ -0.13
RFTN1-210ENST00000484752 MASTLQ96GX5 879 aa14.25□□□□□ -0.13
RFTN1-210ENST00000484752 ZNF594Q96JF6 807 aaPredicted RBP14.25□□□□□ -0.13
RFTN1-210ENST00000484752 CRAMP1Q96RY5 1269 aa14.25□□□□□ -0.13
RFTN1-210ENST00000484752 SEC31BQ9NQW1 1179 aa14.25□□□□□ -0.13
RFTN1-210ENST00000484752 BSDC1Q9NW68 430 aaPredicted RBP14.25□□□□□ -0.13
RFTN1-210ENST00000484752 ATF5Q9Y2D1 282 aaPredicted RBP14.25□□□□□ -0.13
RFTN1-210ENST00000484752 C10orf71Q711Q0 1435 aa14.24□□□□□ -0.13
RFTN1-210ENST00000484752 TNRC6CQ9HCJ0 1690 aaKnown RBP14.24□□□□□ -0.13
RFTN1-210ENST00000484752 LRP5O75197 1615 aa14.24□□□□□ -0.13
RFTN1-210ENST00000484752 BBOX1O75936 387 aa14.24□□□□□ -0.13
RFTN1-210ENST00000484752 HOXA10P31260 410 aaPredicted RBP14.24□□□□□ -0.13
RFTN1-210ENST00000484752 C2CD5Q86YS7 1000 aa14.24□□□□□ -0.13
RFTN1-210ENST00000484752 BCL11AQ9H165 835 aa14.24□□□□□ -0.13
RFTN1-210ENST00000484752 SPON1Q9HCB6 807 aa14.24□□□□□ -0.13
RFTN1-210ENST00000484752 GPR108Q9NPR9 543 aa14.24□□□□□ -0.13
RFTN1-210ENST00000484752 SRGNP10124 158 aa14.23□□□□□ -0.13
RFTN1-210ENST00000484752 STYK1Q6J9G0 422 aa14.23□□□□□ -0.13
RFTN1-210ENST00000484752 AACSQ86V21 672 aa14.23□□□□□ -0.13
RFTN1-210ENST00000484752 ANKRD2Q9GZV1 360 aa14.23□□□□□ -0.13
RFTN1-210ENST00000484752 IL1RAPL2Q9NP60 686 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms