RNA–Protein interactions for RNA: ENST00000484621.1

RNF38-207, Transcript of ring finger protein 38, humanhuman

TSL 4

Gene RNF38, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-207ENST00000484621 DDX60Q8IY21 1712 aaKnown RBP22.89■■□□□ 1.26
RNF38-207ENST00000484621 FAM89AQ96GI7 184 aa22.89■■□□□ 1.25
RNF38-207ENST00000484621 ABHD8Q96I13 439 aa22.89■■□□□ 1.25
RNF38-207ENST00000484621 TAF1DQ9H5J8 278 aaPredicted RBP22.89■■□□□ 1.25
RNF38-207ENST00000484621 MAP3K2Q9Y2U5 619 aa22.89■■□□□ 1.25
RNF38-207ENST00000484621 SCN4AP35499 1836 aa22.88■■□□□ 1.25
RNF38-207ENST00000484621 PI4KAP2A4QPH2 592 aa22.88■■□□□ 1.25
RNF38-207ENST00000484621 RTL5Q5HYW3 569 aaPredicted RBP22.88■■□□□ 1.25
RNF38-207ENST00000484621 KSR2Q6VAB6 950 aa22.88■■□□□ 1.25
RNF38-207ENST00000484621 G2E3Q7L622 706 aa22.88■■□□□ 1.25
RNF38-207ENST00000484621 PI4KAP1Q8N8J0 262 aa22.88■■□□□ 1.25
RNF38-207ENST00000484621 CRAMP1Q96RY5 1269 aa22.88■■□□□ 1.25
RNF38-207ENST00000484621 METTL22Q9BUU2 404 aaPredicted RBP22.88■■□□□ 1.25
RNF38-207ENST00000484621 OLFM4Q6UX06 510 aa22.87■■□□□ 1.25
RNF38-207ENST00000484621 LDHDQ86WU2 507 aa22.87■■□□□ 1.25
RNF38-207ENST00000484621 MIER1Q8N108 512 aa22.87■■□□□ 1.25
RNF38-207ENST00000484621 RTKN2Q8IZC4 609 aa22.86■■□□□ 1.25
RNF38-207ENST00000484621 CCDC191Q8NCU4 936 aa22.86■■□□□ 1.25
RNF38-207ENST00000484621 AIDAQ96BJ3 306 aa22.86■■□□□ 1.25
RNF38-207ENST00000484621 TAF1P21675 1872 aa22.85■■□□□ 1.25
RNF38-207ENST00000484621 TMEM88BA6NKF7 163 aa22.85■■□□□ 1.25
RNF38-207ENST00000484621 PPEF1O14829 653 aaPredicted RBP22.85■■□□□ 1.25
RNF38-207ENST00000484621 NEXNQ0ZGT2 675 aa22.85■■□□□ 1.25
RNF38-207ENST00000484621 FLIIQ13045 1269 aa22.85■■□□□ 1.25
RNF38-207ENST00000484621 CWC25Q9NXE8 425 aaPredicted RBP22.85■■□□□ 1.25
RNF38-207ENST00000484621 E9PSI1 815 aa22.84■■□□□ 1.25
RNF38-207ENST00000484621 FKBP4Q02790 459 aaKnown RBP eCLIP22.84■■□□□ 1.25
RNF38-207ENST00000484621 FKBP5Q13451 457 aaPredicted RBP22.84■■□□□ 1.25
RNF38-207ENST00000484621 EAPPQ56P03 285 aaPredicted RBP22.84■■□□□ 1.25
RNF38-207ENST00000484621 DDX46Q7L014 1031 aaKnown RBP22.84■■□□□ 1.25
RNF38-207ENST00000484621 ZBTB38Q8NAP3 1195 aaPredicted RBP22.84■■□□□ 1.25
RNF38-207ENST00000484621 L3MBTL3Q96JM7 780 aaPredicted RBP22.84■■□□□ 1.25
RNF38-207ENST00000484621 IRS4O14654 1257 aaPredicted RBP22.83■■□□□ 1.25
RNF38-207ENST00000484621 FMR1Q06787 632 aaKnown RBP eCLIP22.83■■□□□ 1.25
RNF38-207ENST00000484621 CC2D2BQ6DHV5 1058 aa22.83■■□□□ 1.25
RNF38-207ENST00000484621 TMX4Q9H1E5 349 aaPredicted RBP22.83■■□□□ 1.25
RNF38-207ENST00000484621 ABCC4O15439 1325 aa22.82■■□□□ 1.24
RNF38-207ENST00000484621 HSP90B1P14625 803 aaKnown RBP22.82■■□□□ 1.24
RNF38-207ENST00000484621 THSD7BQ9C0I4 1608 aa22.82■■□□□ 1.24
RNF38-207ENST00000484621 PCCAP05165 728 aaPredicted RBP22.81■■□□□ 1.24
RNF38-207ENST00000484621 MAP1SQ66K74 1059 aaPredicted RBP22.81■■□□□ 1.24
RNF38-207ENST00000484621 LTBP1Q14766 1721 aa22.81■■□□□ 1.24
RNF38-207ENST00000484621 IGKV5-2P06315 115 aa22.8■■□□□ 1.24
RNF38-207ENST00000484621 SLFN5Q08AF3 891 aa22.8■■□□□ 1.24
RNF38-207ENST00000484621 JARID2Q92833 1246 aaPredicted RBP22.8■■□□□ 1.24
RNF38-207ENST00000484621 ZNF277Q9NRM2 450 aaPredicted RBP22.8■■□□□ 1.24
RNF38-207ENST00000484621 COL4A5P29400 1685 aa22.8■■□□□ 1.24
RNF38-207ENST00000484621 RASSF10A6NK89 507 aa22.79■■□□□ 1.24
RNF38-207ENST00000484621 BBOX1O75936 387 aa22.79■■□□□ 1.24
RNF38-207ENST00000484621 GRAPQ13588 217 aa22.79■■□□□ 1.24
RNF38-207ENST00000484621 SF3B3Q15393 1217 aaKnown RBP22.79■■□□□ 1.24
RNF38-207ENST00000484621 GRIPAP1Q4V328 841 aa22.79■■□□□ 1.24
RNF38-207ENST00000484621 GRAPLQ8TC17 118 aaPredicted RBP22.79■■□□□ 1.24
RNF38-207ENST00000484621 DNAAF4Q8WXU2 420 aa22.79■■□□□ 1.24
RNF38-207ENST00000484621 ATP6V0A2Q9Y487 856 aa22.79■■□□□ 1.24
RNF38-207ENST00000484621 IQCA1LA6NCM1 817 aa22.78■■□□□ 1.24
RNF38-207ENST00000484621 CWF19L2Q2TBE0 894 aaKnown RBP22.78■■□□□ 1.24
RNF38-207ENST00000484621 CDCA7LQ96GN5 454 aa22.78■■□□□ 1.24
RNF38-207ENST00000484621 MYH3P11055 1940 aa22.78■■□□□ 1.24
RNF38-207ENST00000484621 NEURL1BA8MQ27 555 aa22.77■■□□□ 1.24
RNF38-207ENST00000484621 SLC51AQ86UW1 340 aa22.77■■□□□ 1.24
RNF38-207ENST00000484621 PSMD1Q99460 953 aa22.77■■□□□ 1.24
RNF38-207ENST00000484621 CLEC11AQ9Y240 323 aa22.77■■□□□ 1.24
RNF38-207ENST00000484621 WDR33Q9C0J8 1336 aaKnown RBP22.77■■□□□ 1.24
RNF38-207ENST00000484621 SNED1Q8TER0 1413 aa22.76■■□□□ 1.23
RNF38-207ENST00000484621 PDE8AO60658 829 aa22.76■■□□□ 1.23
RNF38-207ENST00000484621 EPHX2P34913 555 aa22.76■■□□□ 1.23
RNF38-207ENST00000484621 IARSP41252 1262 aaKnown RBP22.76■■□□□ 1.23
RNF38-207ENST00000484621 DEFB115Q30KQ5 88 aa22.76■■□□□ 1.23
RNF38-207ENST00000484621 SP8Q8IXZ3 490 aa22.75■■□□□ 1.23
RNF38-207ENST00000484621 CNTROBQ8N137 903 aa22.75■■□□□ 1.23
RNF38-207ENST00000484621 HACL1Q9UJ83 578 aa22.75■■□□□ 1.23
RNF38-207ENST00000484621 TSKSQ9UJT2 592 aa22.75■■□□□ 1.23
RNF38-207ENST00000484621 CCDC85CA6NKD9 419 aa22.74■■□□□ 1.23
RNF38-207ENST00000484621 F6X3S4 739 aa22.74■■□□□ 1.23
RNF38-207ENST00000484621 CCDC152Q4G0S7 254 aa22.74■■□□□ 1.23
RNF38-207ENST00000484621 TMC4Q7Z404 712 aa22.74■■□□□ 1.23
RNF38-207ENST00000484621 LINS1Q8NG48 757 aa22.74■■□□□ 1.23
RNF38-207ENST00000484621 CDHR2Q9BYE9 1310 aa22.74■■□□□ 1.23
RNF38-207ENST00000484621 CELF1Q92879 486 aaKnown RBP22.73■■□□□ 1.23
RNF38-207ENST00000484621 GCKRQ14397 625 aa22.72■■□□□ 1.23
RNF38-207ENST00000484621 DPP8Q6V1X1 898 aaPredicted RBP22.72■■□□□ 1.23
RNF38-207ENST00000484621 UBE3BQ7Z3V4 1068 aa22.72■■□□□ 1.23
RNF38-207ENST00000484621 JDP2Q8WYK2 163 aa22.72■■□□□ 1.23
RNF38-207ENST00000484621 CCDC85AQ96PX6 553 aaPredicted RBP22.72■■□□□ 1.23
RNF38-207ENST00000484621 ABT1Q9ULW3 272 aaKnown RBP22.72■■□□□ 1.23
RNF38-207ENST00000484621 MPNDQ8N594 471 aa22.71■■□□□ 1.23
RNF38-207ENST00000484621 SUPT20HQ8NEM7 779 aa22.71■■□□□ 1.23
RNF38-207ENST00000484621 LRRC37AA6NMS7 1700 aa22.71■■□□□ 1.23
RNF38-207ENST00000484621 CTSWP56202 376 aa22.7■■□□□ 1.22
RNF38-207ENST00000484621 RPS8P62241 208 aaKnown RBP22.7■■□□□ 1.22
RNF38-207ENST00000484621 TRMT2AQ8IZ69 625 aaKnown RBP22.7■■□□□ 1.22
RNF38-207ENST00000484621 LARGE2Q8N3Y3 721 aa22.7■■□□□ 1.22
RNF38-207ENST00000484621 SEC31BQ9NQW1 1179 aa22.7■■□□□ 1.22
RNF38-207ENST00000484621 COL4A1P02462 1669 aa22.69■■□□□ 1.22
RNF38-207ENST00000484621 H7C1W4 665 aa22.69■■□□□ 1.22
RNF38-207ENST00000484621 MLLT1Q03111 559 aaPredicted RBP22.69■■□□□ 1.22
RNF38-207ENST00000484621 GRM1Q13255 1194 aa22.69■■□□□ 1.22
RNF38-207ENST00000484621 CYP4F22Q6NT55 531 aa22.69■■□□□ 1.22
RNF38-207ENST00000484621 SLC4A10Q6U841 1118 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms