RNA–Protein interactions for RNA: ENST00000484236.1

SHROOM3-206, Transcript of shroom family member 3, humanhuman

TSL 2

Gene SHROOM3, Length 475 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-206ENST00000484236 SLC39A7Q92504 469 aa8.88□□□□□ -0.99
SHROOM3-206ENST00000484236 MAP4K1Q92918 833 aa8.88□□□□□ -0.99
SHROOM3-206ENST00000484236 CCDC8Q9H0W5 538 aaPredicted RBP8.88□□□□□ -0.99
SHROOM3-206ENST00000484236 ALDH8A1Q9H2A2 487 aaPredicted RBP8.88□□□□□ -0.99
SHROOM3-206ENST00000484236 ZSWIM6Q9HCJ5 1215 aa8.88□□□□□ -0.99
SHROOM3-206ENST00000484236 TMOD3Q9NYL9 352 aa8.88□□□□□ -0.99
SHROOM3-206ENST00000484236 HMG20BQ9P0W2 317 aa8.88□□□□□ -0.99
SHROOM3-206ENST00000484236 LIMCH1Q9UPQ0 1083 aa8.88□□□□□ -0.99
SHROOM3-206ENST00000484236 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.88□□□□□ -0.99
SHROOM3-206ENST00000484236 DDX49Q9Y6V7 483 aaKnown RBP8.88□□□□□ -0.99
SHROOM3-206ENST00000484236 FPGT-TNNI3KV9GXZ4 949 aa8.88□□□□□ -0.99
SHROOM3-206ENST00000484236 WNK3Q9BYP7 1800 aa8.88□□□□□ -0.99
SHROOM3-206ENST00000484236 MED23Q9ULK4 1368 aa8.87□□□□□ -0.99
SHROOM3-206ENST00000484236 WDR33Q9C0J8 1336 aaKnown RBP8.87□□□□□ -0.99
SHROOM3-206ENST00000484236 CIAO1O76071 339 aa8.87□□□□□ -0.99
SHROOM3-206ENST00000484236 MBD3O95983 291 aa8.87□□□□□ -0.99
SHROOM3-206ENST00000484236 IL15P40933 162 aaPredicted RBP8.87□□□□□ -0.99
SHROOM3-206ENST00000484236 FOXO4P98177 505 aa8.87□□□□□ -0.99
SHROOM3-206ENST00000484236 TSGA10IPQ3SY00 556 aa8.87□□□□□ -0.99
SHROOM3-206ENST00000484236 MCTP1Q6DN14 999 aa8.87□□□□□ -0.99
SHROOM3-206ENST00000484236 RASEFQ8IZ41 740 aa8.87□□□□□ -0.99
SHROOM3-206ENST00000484236 FSD1Q9BTV5 496 aa8.87□□□□□ -0.99
SHROOM3-206ENST00000484236 ISCA1Q9BUE6 129 aa8.87□□□□□ -0.99
SHROOM3-206ENST00000484236 UPF3BQ9BZI7 483 aaKnown RBP8.87□□□□□ -0.99
SHROOM3-206ENST00000484236 GZF1Q9H116 711 aaPredicted RBP8.87□□□□□ -0.99
SHROOM3-206ENST00000484236 SIL1Q9H173 461 aa8.87□□□□□ -0.99
SHROOM3-206ENST00000484236 SH2B1Q9NRF2 756 aaPredicted RBP8.87□□□□□ -0.99
SHROOM3-206ENST00000484236 LMBRD1Q9NUN5 540 aa8.87□□□□□ -0.99
SHROOM3-206ENST00000484236 ZDHHC9Q9Y397 364 aa8.87□□□□□ -0.99
SHROOM3-206ENST00000484236 CYP46A1Q9Y6A2 500 aa8.87□□□□□ -0.99
SHROOM3-206ENST00000484236 DISP2A7MBM2 1401 aa8.87□□□□□ -0.99
SHROOM3-206ENST00000484236 ATP5J2-PTCD1G3V325 749 aa8.86□□□□□ -0.99
SHROOM3-206ENST00000484236 PTCD1O75127 700 aaKnown RBP8.86□□□□□ -0.99
SHROOM3-206ENST00000484236 STARD3NLO95772 234 aa8.86□□□□□ -0.99
SHROOM3-206ENST00000484236 XRCC6P12956 609 aaKnown RBP eCLIP8.86□□□□□ -0.99
SHROOM3-206ENST00000484236 ZNF445P59923 1031 aa8.86□□□□□ -0.99
SHROOM3-206ENST00000484236 TFCP2Q12800 502 aa8.86□□□□□ -0.99
SHROOM3-206ENST00000484236 NMIQ13287 307 aaPredicted RBP8.86□□□□□ -0.99
SHROOM3-206ENST00000484236 TCIRG1Q13488 830 aa8.86□□□□□ -0.99
SHROOM3-206ENST00000484236 KRT32Q14532 448 aa8.86□□□□□ -0.99
SHROOM3-206ENST00000484236 ANKRD1Q15327 319 aa8.86□□□□□ -0.99
SHROOM3-206ENST00000484236 ASTLQ6HA08 431 aaPredicted RBP8.86□□□□□ -0.99
SHROOM3-206ENST00000484236 LMBR1LQ6UX01 489 aa8.86□□□□□ -0.99
SHROOM3-206ENST00000484236 TTLL7Q6ZT98 887 aa8.86□□□□□ -0.99
SHROOM3-206ENST00000484236 DDX54Q8TDD1 881 aaKnown RBP8.86□□□□□ -0.99
SHROOM3-206ENST00000484236 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.86□□□□□ -0.99
SHROOM3-206ENST00000484236 HAUS7Q99871 368 aa8.86□□□□□ -0.99
SHROOM3-206ENST00000484236 PLA2G12BQ9BX93 195 aa8.86□□□□□ -0.99
SHROOM3-206ENST00000484236 BOLA2Q9H3K6 86 aa8.86□□□□□ -0.99
SHROOM3-206ENST00000484236 GRPEL1Q9HAV7 217 aa8.86□□□□□ -0.99
SHROOM3-206ENST00000484236 SCUBE2Q9NQ36 999 aa8.86□□□□□ -0.99
SHROOM3-206ENST00000484236 STRN4Q9NRL3 753 aa8.86□□□□□ -0.99
SHROOM3-206ENST00000484236 DBNLQ9UJU6 430 aaKnown RBP8.86□□□□□ -0.99
SHROOM3-206ENST00000484236 BRPF3Q9ULD4 1205 aa8.86□□□□□ -0.99
SHROOM3-206ENST00000484236 RBM8AQ9Y5S9 174 aaKnown RBP8.86□□□□□ -0.99
SHROOM3-206ENST00000484236 ANKRD36CQ5JPF3 1778 aa8.86□□□□□ -0.99
SHROOM3-206ENST00000484236 RPAP1Q9BWH6 1393 aaPredicted RBP8.86□□□□□ -0.99
SHROOM3-206ENST00000484236 A1BGP04217 495 aa8.85□□□□□ -0.99
SHROOM3-206ENST00000484236 CASTP20810 708 aaKnown RBP8.85□□□□□ -0.99
SHROOM3-206ENST00000484236 PIP4K2AP48426 406 aaPredicted RBP8.85□□□□□ -0.99
SHROOM3-206ENST00000484236 AK2P54819 239 aa8.85□□□□□ -0.99
SHROOM3-206ENST00000484236 PTH1RQ03431 593 aa8.85□□□□□ -0.99
SHROOM3-206ENST00000484236 PKP1Q13835 747 aa8.85□□□□□ -0.99
SHROOM3-206ENST00000484236 HSP90AB3PQ58FF7 597 aa8.85□□□□□ -0.99
SHROOM3-206ENST00000484236 CREB3L3Q68CJ9 461 aa8.85□□□□□ -0.99
SHROOM3-206ENST00000484236 PRPF40BQ6NWY9 871 aaKnown RBP8.85□□□□□ -0.99
SHROOM3-206ENST00000484236 KIF6Q6ZMV9 814 aa8.85□□□□□ -0.99
SHROOM3-206ENST00000484236 RUFY3Q7L099 469 aa8.85□□□□□ -0.99
SHROOM3-206ENST00000484236 KLHL34Q8N239 644 aa8.85□□□□□ -0.99
SHROOM3-206ENST00000484236 KLHDC4Q8TBB5 520 aa8.85□□□□□ -0.99
SHROOM3-206ENST00000484236 CDCA7Q9BWT1 371 aaPredicted RBP8.85□□□□□ -0.99
SHROOM3-206ENST00000484236 PDRG1Q9NUG6 133 aa8.85□□□□□ -0.99
SHROOM3-206ENST00000484236 TLR7Q9NYK1 1049 aaKnown RBP8.85□□□□□ -0.99
SHROOM3-206ENST00000484236 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.85□□□□□ -0.99
SHROOM3-206ENST00000484236 PALLDQ8WX93 1383 aa8.85□□□□□ -0.99
SHROOM3-206ENST00000484236 ROBO1Q9Y6N7 1651 aa8.85□□□□□ -0.99
SHROOM3-206ENST00000484236 EYA2O00167 538 aa8.84□□□□□ -0.99
SHROOM3-206ENST00000484236 ATMINO43313 823 aaPredicted RBP8.84□□□□□ -0.99
SHROOM3-206ENST00000484236 KCNJ4P48050 445 aa8.84□□□□□ -0.99
SHROOM3-206ENST00000484236 LRRFIP1Q32MZ4 808 aaKnown RBP8.84□□□□□ -0.99
SHROOM3-206ENST00000484236 USPL1Q5W0Q7 1092 aa8.84□□□□□ -0.99
SHROOM3-206ENST00000484236 FAM43AQ8N2R8 423 aa8.84□□□□□ -0.99
SHROOM3-206ENST00000484236 FAM227BQ96M60 508 aa8.84□□□□□ -0.99
SHROOM3-206ENST00000484236 JAKMIP1Q96N16 626 aaKnown RBP8.84□□□□□ -0.99
SHROOM3-206ENST00000484236 BTG4Q9NY30 223 aa8.84□□□□□ -0.99
SHROOM3-206ENST00000484236 ATP6V1DQ9Y5K8 247 aa8.84□□□□□ -0.99
SHROOM3-206ENST00000484236 ABCC12Q96J65 1359 aa8.84□□□□□ -0.99
SHROOM3-206ENST00000484236 MYH3P11055 1940 aa8.84□□□□□ -1
SHROOM3-206ENST00000484236 COL16A1Q07092 1604 aaPredicted RBP8.83□□□□□ -1
SHROOM3-206ENST00000484236 SH3TC1Q8TE82 1336 aa8.83□□□□□ -1
SHROOM3-206ENST00000484236 CDHR2Q9BYE9 1310 aa8.83□□□□□ -1
SHROOM3-206ENST00000484236 BCL9O00512 1426 aa8.83□□□□□ -1
SHROOM3-206ENST00000484236 ZNF609O15014 1411 aa8.83□□□□□ -1
SHROOM3-206ENST00000484236 A0A0D9SFI3 127 aa8.83□□□□□ -1
SHROOM3-206ENST00000484236 SLC27A2O14975 620 aa8.83□□□□□ -1
SHROOM3-206ENST00000484236 PRPF40AO75400 957 aaKnown RBP8.83□□□□□ -1
SHROOM3-206ENST00000484236 TAF5LO75529 589 aa8.83□□□□□ -1
SHROOM3-206ENST00000484236 PCCAP05165 728 aaPredicted RBP8.83□□□□□ -1
SHROOM3-206ENST00000484236 BLOC1S2Q6QNY1 142 aa8.83□□□□□ -1
SHROOM3-206ENST00000484236 ATG9AQ7Z3C6 839 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms