RNA–Protein interactions for RNA: ENST00000483891.1

COPS6-209, Transcript of COP9 signalosome subunit 6, humanhuman

TSL 3

Gene COPS6, Length 734 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6-209ENST00000483891 NPM2Q86SE8 214 aaKnown RBP7.72□□□□□ -1.17
COPS6-209ENST00000483891 VSIG10Q8N0Z9 540 aa7.72□□□□□ -1.17
COPS6-209ENST00000483891 SSH1Q8WYL5 1049 aa7.72□□□□□ -1.17
COPS6-209ENST00000483891 FRAT1Q92837 279 aaPredicted RBP7.72□□□□□ -1.17
COPS6-209ENST00000483891 ZNF622Q969S3 477 aaKnown RBP eCLIP7.72□□□□□ -1.17
COPS6-209ENST00000483891 SAGE1Q9NXZ1 904 aa7.72□□□□□ -1.17
COPS6-209ENST00000483891 RCAN3Q9UKA8 241 aa7.72□□□□□ -1.17
COPS6-209ENST00000483891 ZNF541Q9H0D2 1346 aa7.72□□□□□ -1.17
COPS6-209ENST00000483891 COL15A1P39059 1388 aa7.71□□□□□ -1.17
COPS6-209ENST00000483891 NBPF26B4DH59 902 aa7.71□□□□□ -1.18
COPS6-209ENST00000483891 BCAR3O75815 825 aa7.71□□□□□ -1.18
COPS6-209ENST00000483891 SRGNP10124 158 aa7.71□□□□□ -1.18
COPS6-209ENST00000483891 NBPF10Q6P3W6 841 aaKnown RBP7.71□□□□□ -1.18
COPS6-209ENST00000483891 XAGE3Q8WTP9 111 aa7.71□□□□□ -1.18
COPS6-209ENST00000483891 ZNF428Q96B54 188 aa7.71□□□□□ -1.18
COPS6-209ENST00000483891 TEX13AQ9BXU3 409 aaPredicted RBP7.71□□□□□ -1.18
COPS6-209ENST00000483891 RNF123Q5XPI4 1314 aa7.71□□□□□ -1.18
COPS6-209ENST00000483891 FXR1P51114 621 aaKnown RBP eCLIP7.7□□□□□ -1.18
COPS6-209ENST00000483891 RARSP54136 660 aaKnown RBP7.7□□□□□ -1.18
COPS6-209ENST00000483891 FKBP4Q02790 459 aaKnown RBP eCLIP7.7□□□□□ -1.18
COPS6-209ENST00000483891 PRPF40BQ6NWY9 871 aaKnown RBP7.7□□□□□ -1.18
COPS6-209ENST00000483891 KIF6Q6ZMV9 814 aa7.7□□□□□ -1.18
COPS6-209ENST00000483891 PAXIP1Q6ZW49 1069 aaPredicted RBP7.7□□□□□ -1.18
COPS6-209ENST00000483891 G2E3Q7L622 706 aa7.7□□□□□ -1.18
COPS6-209ENST00000483891 ZBTB3Q9H5J0 574 aa7.7□□□□□ -1.18
COPS6-209ENST00000483891 PHAXQ9H814 394 aaKnown RBP7.7□□□□□ -1.18
COPS6-209ENST00000483891 DBF4Q9UBU7 674 aaPredicted RBP7.7□□□□□ -1.18
COPS6-209ENST00000483891 SCN7AQ01118 1682 aa7.7□□□□□ -1.18
COPS6-209ENST00000483891 CT47B1P0C2W7 299 aaPredicted RBP7.69□□□□□ -1.18
COPS6-209ENST00000483891 FLIIQ13045 1269 aa7.69□□□□□ -1.18
COPS6-209ENST00000483891 NOGQ13253 232 aa7.69□□□□□ -1.18
COPS6-209ENST00000483891 FKBP5Q13451 457 aaPredicted RBP7.69□□□□□ -1.18
COPS6-209ENST00000483891 PDIA6Q15084 440 aa7.69□□□□□ -1.18
COPS6-209ENST00000483891 CCDC93Q567U6 631 aa7.69□□□□□ -1.18
COPS6-209ENST00000483891 CIAPIN1Q6FI81 312 aa7.69□□□□□ -1.18
COPS6-209ENST00000483891 PRR5LQ6MZQ0 368 aa7.69□□□□□ -1.18
COPS6-209ENST00000483891 TTLL7Q6ZT98 887 aa7.69□□□□□ -1.18
COPS6-209ENST00000483891 USP50Q70EL3 339 aaPredicted RBP7.69□□□□□ -1.18
COPS6-209ENST00000483891 COPS6Q7L5N1 327 aa7.69□□□□□ -1.18
COPS6-209ENST00000483891 DZIP3Q86Y13 1208 aaKnown RBP7.69□□□□□ -1.18
COPS6-209ENST00000483891 MRPL50Q8N5N7 158 aaKnown RBP7.69□□□□□ -1.18
COPS6-209ENST00000483891 MASTLQ96GX5 879 aa7.69□□□□□ -1.18
COPS6-209ENST00000483891 TBC1D2BQ9UPU7 963 aa7.69□□□□□ -1.18
COPS6-209ENST00000483891 TNNQ9UQP3 1299 aa7.69□□□□□ -1.18
COPS6-209ENST00000483891 ERBB4Q15303 1308 aa7.69□□□□□ -1.18
COPS6-209ENST00000483891 CEP290O15078 2479 aa7.69□□□□□ -1.18
COPS6-209ENST00000483891 SNED1Q8TER0 1413 aa7.69□□□□□ -1.18
COPS6-209ENST00000483891 F6X3S4 739 aa7.68□□□□□ -1.18
COPS6-209ENST00000483891 PLIN1O60240 522 aa7.68□□□□□ -1.18
COPS6-209ENST00000483891 IL6STP40189 918 aaPredicted RBP7.68□□□□□ -1.18
COPS6-209ENST00000483891 FMR1Q06787 632 aaKnown RBP eCLIP7.68□□□□□ -1.183e-8■■■□□ 16.5
COPS6-209ENST00000483891 PKN2Q16513 984 aaKnown RBP7.68□□□□□ -1.18
COPS6-209ENST00000483891 ALDH1L2Q3SY69 923 aa7.68□□□□□ -1.18
COPS6-209ENST00000483891 SLC4A10Q6U841 1118 aa7.68□□□□□ -1.18
COPS6-209ENST00000483891 RTKN2Q8IZC4 609 aa7.68□□□□□ -1.18
COPS6-209ENST00000483891 CLUAP1Q96AJ1 413 aa7.68□□□□□ -1.18
COPS6-209ENST00000483891 HYPKQ9NX55 129 aa7.68□□□□□ -1.18
COPS6-209ENST00000483891 PGAP2Q9UHJ9 254 aa7.68□□□□□ -1.18
COPS6-209ENST00000483891 NOB1Q9ULX3 412 aaKnown RBP7.68□□□□□ -1.18
COPS6-209ENST00000483891 KIF16BQ96L93 1317 aa7.68□□□□□ -1.18
COPS6-209ENST00000483891 TRIOBPQ9H2D6 2365 aa7.68□□□□□ -1.18
COPS6-209ENST00000483891 COL6A3P12111 3177 aa7.67□□□□□ -1.18
COPS6-209ENST00000483891 KIAA0100Q14667 2235 aaKnown RBP7.67□□□□□ -1.18
COPS6-209ENST00000483891 RBBP6Q7Z6E9 1792 aaKnown RBP7.67□□□□□ -1.18
COPS6-209ENST00000483891 KLRG2A4D1S0 409 aaPredicted RBP7.67□□□□□ -1.18
COPS6-209ENST00000483891 DDX58O95786 925 aaKnown RBP7.67□□□□□ -1.18
COPS6-209ENST00000483891 SCNN1DP51172 638 aa7.67□□□□□ -1.18
COPS6-209ENST00000483891 EIF5P55010 431 aaKnown RBP7.67□□□□□ -1.18
COPS6-209ENST00000483891 IRX6P78412 446 aaPredicted RBP7.67□□□□□ -1.18
COPS6-209ENST00000483891 GRM1Q13255 1194 aa7.67□□□□□ -1.18
COPS6-209ENST00000483891 BICDL1Q6ZP65 573 aa7.67□□□□□ -1.18
COPS6-209ENST00000483891 RIC3Q7Z5B4 369 aa7.67□□□□□ -1.18
COPS6-209ENST00000483891 CTU1Q7Z7A3 348 aaKnown RBP7.67□□□□□ -1.18
COPS6-209ENST00000483891 FTSJ3Q8IY81 847 aaKnown RBP7.67□□□□□ -1.18
COPS6-209ENST00000483891 CHMP4AQ9BY43 222 aa7.67□□□□□ -1.18
COPS6-209ENST00000483891 FBXO3Q9UK99 471 aa7.67□□□□□ -1.18
COPS6-209ENST00000483891 SSUH2Q9Y2M2 353 aa7.67□□□□□ -1.18
COPS6-209ENST00000483891 MAP3K2Q9Y2U5 619 aa7.67□□□□□ -1.18
COPS6-209ENST00000483891 A0A087WZG4 1122 aa7.66□□□□□ -1.18
COPS6-209ENST00000483891 FAM177BA6PVY3 158 aa7.66□□□□□ -1.18
COPS6-209ENST00000483891 TRAF5O00463 557 aa7.66□□□□□ -1.18
COPS6-209ENST00000483891 DLL1O00548 723 aa7.66□□□□□ -1.18
COPS6-209ENST00000483891 GPTP24298 496 aa7.66□□□□□ -1.18
COPS6-209ENST00000483891 LMOD1P29536 600 aaPredicted RBP7.66□□□□□ -1.18
COPS6-209ENST00000483891 IARSP41252 1262 aaKnown RBP7.66□□□□□ -1.18
COPS6-209ENST00000483891 RRP1P56182 461 aaKnown RBP7.66□□□□□ -1.18
COPS6-209ENST00000483891 ZKSCAN2Q63HK3 967 aa7.66□□□□□ -1.18
COPS6-209ENST00000483891 TBC1D9BQ66K14 1250 aa7.66□□□□□ -1.18
COPS6-209ENST00000483891 LRP10Q7Z4F1 713 aa7.66□□□□□ -1.18
COPS6-209ENST00000483891 PSMD1Q99460 953 aa7.66□□□□□ -1.18
COPS6-209ENST00000483891 MYD88Q99836 296 aa7.66□□□□□ -1.18
COPS6-209ENST00000483891 ZNF277Q9NRM2 450 aaPredicted RBP7.66□□□□□ -1.18
COPS6-209ENST00000483891 HPS5Q9UPZ3 1129 aa7.66□□□□□ -1.18
COPS6-209ENST00000483891 SUPT16HQ9Y5B9 1047 aaKnown RBP7.66□□□□□ -1.18
COPS6-209ENST00000483891 MAP3K15Q6ZN16 1313 aa7.66□□□□□ -1.18
COPS6-209ENST00000483891 POLR2AP24928 1970 aaKnown RBP7.66□□□□□ -1.18
COPS6-209ENST00000483891 PI4KAP2A4QPH2 592 aa7.65□□□□□ -1.18
COPS6-209ENST00000483891 FAM155AB1AL88 458 aaPredicted RBP7.65□□□□□ -1.18
COPS6-209ENST00000483891 ATP5J2-PTCD1G3V325 749 aa7.65□□□□□ -1.18
COPS6-209ENST00000483891 CAMTA2O94983 1202 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms