RNA–Protein interactions for RNA: ENST00000483888.6

COL12A1-207, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL12A1, Length 9,637 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-207ENST00000483888 PRR16Q569H4 304 aa11.66□□□□□ -0.54
COL12A1-207ENST00000483888 SNX21Q969T3 373 aa11.66□□□□□ -0.54
COL12A1-207ENST00000483888 CTAGE1Q96RT6 745 aa11.66□□□□□ -0.54
COL12A1-207ENST00000483888 CARMIL1Q5VZK9 1371 aa11.66□□□□□ -0.54
COL12A1-207ENST00000483888 DESP17661 470 aa11.66□□□□□ -0.54
COL12A1-207ENST00000483888 TWISTNBQ3B726 338 aaPredicted RBP11.66□□□□□ -0.54
COL12A1-207ENST00000483888 MAP7D1Q3KQU3 841 aa11.66□□□□□ -0.54
COL12A1-207ENST00000483888 SPATS2Q86XZ4 545 aaKnown RBP11.66□□□□□ -0.54
COL12A1-207ENST00000483888 CCDC110Q8TBZ0 833 aa11.66□□□□□ -0.54
COL12A1-207ENST00000483888 SREK1Q8WXA9 508 aaKnown RBP11.66□□□□□ -0.54
COL12A1-207ENST00000483888 CCT4P50991 539 aaKnown RBP11.66□□□□□ -0.54
COL12A1-207ENST00000483888 TMEM132AQ24JP5 1023 aa11.66□□□□□ -0.54
COL12A1-207ENST00000483888 GKAP1Q5VSY0 366 aaPredicted RBP11.66□□□□□ -0.54
COL12A1-207ENST00000483888 GUCA1BQ9UMX6 200 aa11.66□□□□□ -0.54
COL12A1-207ENST00000483888 PPFIA2O75334 1257 aa11.66□□□□□ -0.54
COL12A1-207ENST00000483888 MCTP2Q6DN12 878 aa11.66□□□□□ -0.54
COL12A1-207ENST00000483888 KRT86O43790 486 aa11.65□□□□□ -0.54
COL12A1-207ENST00000483888 WDHD1O75717 1129 aaPredicted RBP11.65□□□□□ -0.54
COL12A1-207ENST00000483888 STAG1Q8WVM7 1258 aa11.65□□□□□ -0.54
COL12A1-207ENST00000483888 DHX29Q7Z478 1369 aaKnown RBP11.65□□□□□ -0.54
COL12A1-207ENST00000483888 POLA1P09884 1462 aaPredicted RBP11.65□□□□□ -0.54
COL12A1-207ENST00000483888 N4BP3O15049 544 aa11.65□□□□□ -0.54
COL12A1-207ENST00000483888 LRRC43Q8N309 656 aa11.65□□□□□ -0.54
COL12A1-207ENST00000483888 SMARCC2Q8TAQ2 1214 aa11.65□□□□□ -0.54
COL12A1-207ENST00000483888 STAC3Q96MF2 364 aa11.65□□□□□ -0.54
COL12A1-207ENST00000483888 FLIIQ13045 1269 aa11.65□□□□□ -0.54
COL12A1-207ENST00000483888 CTNNA2P26232 953 aa11.65□□□□□ -0.54
COL12A1-207ENST00000483888 PRPF40BQ6NWY9 871 aaKnown RBP11.65□□□□□ -0.54
COL12A1-207ENST00000483888 MCUR1Q96AQ8 359 aa11.65□□□□□ -0.54
COL12A1-207ENST00000483888 ZC4H2Q9NQZ6 224 aa11.65□□□□□ -0.54
COL12A1-207ENST00000483888 KAT6BQ8WYB5 2073 aa11.65□□□□□ -0.54
COL12A1-207ENST00000483888 PRC1O43663 620 aa11.65□□□□□ -0.54
COL12A1-207ENST00000483888 RANBP1P43487 201 aa11.65□□□□□ -0.54
COL12A1-207ENST00000483888 TLDC2A0PJX2 215 aa11.65□□□□□ -0.55
COL12A1-207ENST00000483888 ZNF131P52739 623 aa11.65□□□□□ -0.55
COL12A1-207ENST00000483888 WWC2Q6AWC2 1192 aa11.65□□□□□ -0.55
COL12A1-207ENST00000483888 EID1Q9Y6B2 187 aa11.65□□□□□ -0.55
COL12A1-207ENST00000483888 HIP1RO75146 1068 aa11.64□□□□□ -0.55
COL12A1-207ENST00000483888 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.64□□□□□ -0.55
COL12A1-207ENST00000483888 KLHDC4Q8TBB5 520 aa11.64□□□□□ -0.55
COL12A1-207ENST00000483888 SLFN5Q08AF3 891 aa11.64□□□□□ -0.55
COL12A1-207ENST00000483888 IFNKQ9P0W0 207 aa11.64□□□□□ -0.55
COL12A1-207ENST00000483888 HGSO14964 777 aaPredicted RBP11.64□□□□□ -0.55
COL12A1-207ENST00000483888 GRIPAP1Q4V328 841 aa11.64□□□□□ -0.55
COL12A1-207ENST00000483888 CCDC65Q8IXS2 484 aa11.64□□□□□ -0.55
COL12A1-207ENST00000483888 PPFIA1Q13136 1202 aa11.64□□□□□ -0.55
COL12A1-207ENST00000483888 KIAA1524Q8TCG1 905 aa11.64□□□□□ -0.55
COL12A1-207ENST00000483888 CCDC77Q9BR77 488 aa11.64□□□□□ -0.55
COL12A1-207ENST00000483888 SUFUQ9UMX1 484 aa11.64□□□□□ -0.55
COL12A1-207ENST00000483888 KRT13P13646 458 aa11.64□□□□□ -0.55
COL12A1-207ENST00000483888 SAMD1Q6SPF0 538 aaPredicted RBP11.64□□□□□ -0.55
COL12A1-207ENST00000483888 TMX3Q96JJ7 454 aa11.64□□□□□ -0.55
COL12A1-207ENST00000483888 VCX3AQ9NNX9 186 aa11.64□□□□□ -0.55
COL12A1-207ENST00000483888 DACT1Q9NYF0 836 aa11.64□□□□□ -0.55
COL12A1-207ENST00000483888 CLTAP09496 248 aa11.64□□□□□ -0.55
COL12A1-207ENST00000483888 VPS41P49754 854 aa11.64□□□□□ -0.55
COL12A1-207ENST00000483888 TTC5Q8N0Z6 440 aa11.64□□□□□ -0.55
COL12A1-207ENST00000483888 LMOD1P29536 600 aaPredicted RBP11.63□□□□□ -0.55
COL12A1-207ENST00000483888 KIF5AQ12840 1032 aa11.63□□□□□ -0.55
COL12A1-207ENST00000483888 STMN1P16949 149 aa11.63□□□□□ -0.55
COL12A1-207ENST00000483888 LRRC45Q96CN5 670 aa11.63□□□□□ -0.55
COL12A1-207ENST00000483888 XAB2Q9HCS7 855 aaKnown RBP11.63□□□□□ -0.55
COL12A1-207ENST00000483888 GIGYF1O75420 1035 aaPredicted RBP11.63□□□□□ -0.55
COL12A1-207ENST00000483888 PPP1R7Q15435 360 aa11.63□□□□□ -0.55
COL12A1-207ENST00000483888 NLRP5P59047 1200 aa11.63□□□□□ -0.55
COL12A1-207ENST00000483888 KRT83P78385 493 aa11.63□□□□□ -0.55
COL12A1-207ENST00000483888 IRX5P78411 483 aaPredicted RBP11.63□□□□□ -0.55
COL12A1-207ENST00000483888 GPR161Q8N6U8 529 aaKnown RBP11.63□□□□□ -0.55
COL12A1-207ENST00000483888 TSC22D3Q99576 134 aa11.63□□□□□ -0.55
COL12A1-207ENST00000483888 LRPPRCP42704 1394 aaKnown RBP11.63□□□□□ -0.55
COL12A1-207ENST00000483888 AKR1B10O60218 316 aa11.63□□□□□ -0.55
COL12A1-207ENST00000483888 MTHFSP49914 203 aa11.63□□□□□ -0.55
COL12A1-207ENST00000483888 TTC39AQ5SRH9 613 aa11.63□□□□□ -0.55
COL12A1-207ENST00000483888 DDX54Q8TDD1 881 aaKnown RBP11.63□□□□□ -0.55
COL12A1-207ENST00000483888 NUF2Q9BZD4 464 aa11.63□□□□□ -0.55
COL12A1-207ENST00000483888 SMARCA5O60264 1052 aaPredicted RBP11.63□□□□□ -0.55
COL12A1-207ENST00000483888 SH3GL3Q99963 347 aa11.63□□□□□ -0.55
COL12A1-207ENST00000483888 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.63□□□□□ -0.55
COL12A1-207ENST00000483888 AACSQ86V21 672 aa11.63□□□□□ -0.55
COL12A1-207ENST00000483888 ZNF445P59923 1031 aa11.62□□□□□ -0.55
COL12A1-207ENST00000483888 PPARDQ03181 441 aa11.62□□□□□ -0.55
COL12A1-207ENST00000483888 NUTM2DQ5VT03 806 aaPredicted RBP11.62□□□□□ -0.55
COL12A1-207ENST00000483888 NGDNQ8NEJ9 315 aaKnown RBP11.62□□□□□ -0.55
COL12A1-207ENST00000483888 USP6NLQ92738 828 aa11.62□□□□□ -0.55
COL12A1-207ENST00000483888 TUBB2AQ13885 445 aa11.62□□□□□ -0.55
COL12A1-207ENST00000483888 E2F5Q15329 346 aa11.62□□□□□ -0.55
COL12A1-207ENST00000483888 SMC5Q8IY18 1101 aa11.62□□□□□ -0.55
COL12A1-207ENST00000483888 BAG1Q99933 345 aaPredicted RBP11.62□□□□□ -0.55
COL12A1-207ENST00000483888 TUBB2BQ9BVA1 445 aa11.62□□□□□ -0.55
COL12A1-207ENST00000483888 POLE2P56282 527 aa11.62□□□□□ -0.55
COL12A1-207ENST00000483888 DUSP27Q5VZP5 1158 aa11.62□□□□□ -0.55
COL12A1-207ENST00000483888 KANK3Q6NY19 840 aa11.62□□□□□ -0.55
COL12A1-207ENST00000483888 BMP2KLQ5H9B9 411 aa11.62□□□□□ -0.55
COL12A1-207ENST00000483888 ATP5DP30049 168 aa11.62□□□□□ -0.55
COL12A1-207ENST00000483888 TSGA10Q9BZW7 698 aa11.62□□□□□ -0.55
COL12A1-207ENST00000483888 ZSCAN16Q9H4T2 348 aaPredicted RBP11.62□□□□□ -0.55
COL12A1-207ENST00000483888 PPANQ9NQ55 473 aaKnown RBP11.62□□□□□ -0.55
COL12A1-207ENST00000483888 CCDC62Q6P9F0 684 aa11.62□□□□□ -0.55
COL12A1-207ENST00000483888 TRIM6Q9C030 488 aaPredicted RBP11.62□□□□□ -0.55
COL12A1-207ENST00000483888 SYKP43405 635 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms