RNA–Protein interactions for RNA: ENST00000483617.5

PTPN18-212, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-212ENST00000483617 XAGE3Q8WTP9 111 aa14.33□□□□□ -0.12
PTPN18-212ENST00000483617 RPGRQ92834 1020 aaKnown RBP14.33□□□□□ -0.12
PTPN18-212ENST00000483617 SNED1Q8TER0 1413 aa14.32□□□□□ -0.12
PTPN18-212ENST00000483617 CCT4P50991 539 aaKnown RBP14.32□□□□□ -0.12
PTPN18-212ENST00000483617 AIMP1Q12904 312 aaKnown RBP14.32□□□□□ -0.12
PTPN18-212ENST00000483617 OLFM4Q6UX06 510 aa14.32□□□□□ -0.12
PTPN18-212ENST00000483617 RTKN2Q8IZC4 609 aa14.32□□□□□ -0.12
PTPN18-212ENST00000483617 SMC1BQ8NDV3 1235 aa14.32□□□□□ -0.12
PTPN18-212ENST00000483617 UTP14AQ9BVJ6 771 aaKnown RBP14.32□□□□□ -0.12
PTPN18-212ENST00000483617 HOXA10P31260 410 aaPredicted RBP14.31□□□□□ -0.12
PTPN18-212ENST00000483617 ABCC4O15439 1325 aa14.31□□□□□ -0.12
PTPN18-212ENST00000483617 POTECB2RU33 542 aa14.3□□□□□ -0.12
PTPN18-212ENST00000483617 RLBP1P12271 317 aa14.3□□□□□ -0.12
PTPN18-212ENST00000483617 SLC4A10Q6U841 1118 aa14.3□□□□□ -0.12
PTPN18-212ENST00000483617 C3orf67Q6ZVT6 689 aa14.3□□□□□ -0.12
PTPN18-212ENST00000483617 TMEM57Q8N5G2 664 aa14.3□□□□□ -0.12
PTPN18-212ENST00000483617 RBM17Q96I25 401 aaKnown RBP14.3□□□□□ -0.12
PTPN18-212ENST00000483617 ZNF277Q9NRM2 450 aaPredicted RBP14.3□□□□□ -0.12
PTPN18-212ENST00000483617 PPEF1O14829 653 aaPredicted RBP14.29□□□□□ -0.12
PTPN18-212ENST00000483617 TCIRG1Q13488 830 aa14.29□□□□□ -0.12
PTPN18-212ENST00000483617 SLC10A5Q5PT55 438 aa14.29□□□□□ -0.12
PTPN18-212ENST00000483617 INTS3Q68E01 1043 aaKnown RBP14.29□□□□□ -0.12
PTPN18-212ENST00000483617 CC2D2BQ6DHV5 1058 aa14.29□□□□□ -0.12
PTPN18-212ENST00000483617 NLRP10Q86W26 655 aa14.29□□□□□ -0.12
PTPN18-212ENST00000483617 NLRP3Q96P20 1036 aa14.29□□□□□ -0.12
PTPN18-212ENST00000483617 CRAMP1Q96RY5 1269 aa14.29□□□□□ -0.12
PTPN18-212ENST00000483617 DDNO94850 711 aaPredicted RBP14.28□□□□□ -0.12
PTPN18-212ENST00000483617 IARSP41252 1262 aaKnown RBP14.28□□□□□ -0.12
PTPN18-212ENST00000483617 LAMB2P55268 1798 aa14.28□□□□□ -0.12
PTPN18-212ENST00000483617 G2E3Q7L622 706 aa14.28□□□□□ -0.12
PTPN18-212ENST00000483617 PLBD2Q8NHP8 589 aa14.28□□□□□ -0.12
PTPN18-212ENST00000483617 PSMD1Q99460 953 aa14.28□□□□□ -0.12
PTPN18-212ENST00000483617 TNNQ9UQP3 1299 aa14.28□□□□□ -0.12
PTPN18-212ENST00000483617 SH3TC1Q8TE82 1336 aa14.27□□□□□ -0.12
PTPN18-212ENST00000483617 ZNF541Q9H0D2 1346 aa14.27□□□□□ -0.12
PTPN18-212ENST00000483617 NEXNQ0ZGT2 675 aa14.27□□□□□ -0.13
PTPN18-212ENST00000483617 GRIPAP1Q4V328 841 aa14.27□□□□□ -0.13
PTPN18-212ENST00000483617 SYNE4Q8N205 404 aa14.27□□□□□ -0.13
PTPN18-212ENST00000483617 DNAAF4Q8WXU2 420 aa14.27□□□□□ -0.13
PTPN18-212ENST00000483617 PHAXQ9H814 394 aaKnown RBP14.27□□□□□ -0.13
PTPN18-212ENST00000483617 HDAC5Q9UQL6 1122 aa14.27□□□□□ -0.13
PTPN18-212ENST00000483617 B4GALNT3Q6L9W6 998 aa14.26□□□□□ -0.13
PTPN18-212ENST00000483617 KSR2Q6VAB6 950 aa14.26□□□□□ -0.13
PTPN18-212ENST00000483617 ANKRD13DQ6ZTN6 518 aa14.26□□□□□ -0.13
PTPN18-212ENST00000483617 RIC3Q7Z5B4 369 aa14.26□□□□□ -0.13
PTPN18-212ENST00000483617 L3MBTL3Q96JM7 780 aaPredicted RBP14.26□□□□□ -0.13
PTPN18-212ENST00000483617 TRMT112Q9UI30 125 aaKnown RBP14.26□□□□□ -0.13
PTPN18-212ENST00000483617 PI4KAP2A4QPH2 592 aa14.25□□□□□ -0.13
PTPN18-212ENST00000483617 IQCA1LA6NCM1 817 aa14.25□□□□□ -0.13
PTPN18-212ENST00000483617 FZD9O00144 591 aa14.25□□□□□ -0.13
PTPN18-212ENST00000483617 HCLS1P14317 486 aaPredicted RBP14.25□□□□□ -0.13
PTPN18-212ENST00000483617 SLC51AQ86UW1 340 aa14.25□□□□□ -0.13
PTPN18-212ENST00000483617 DNAJC5GQ8N7S2 189 aa14.25□□□□□ -0.13
PTPN18-212ENST00000483617 PI4KAP1Q8N8J0 262 aa14.25□□□□□ -0.13
PTPN18-212ENST00000483617 SRCIN1Q9C0H9 1055 aa14.25□□□□□ -0.13
PTPN18-212ENST00000483617 COL4A5P29400 1685 aa14.25□□□□□ -0.13
PTPN18-212ENST00000483617 SCN4AP35499 1836 aa14.25□□□□□ -0.13
PTPN18-212ENST00000483617 DDX60Q8IY21 1712 aaKnown RBP14.24□□□□□ -0.13
PTPN18-212ENST00000483617 F6X3S4 739 aa14.24□□□□□ -0.13
PTPN18-212ENST00000483617 GNAI3P08754 354 aa14.24□□□□□ -0.13
PTPN18-212ENST00000483617 HTRA3P83110 453 aa14.24□□□□□ -0.13
PTPN18-212ENST00000483617 ISCA1Q9BUE6 129 aa14.24□□□□□ -0.13
PTPN18-212ENST00000483617 TMX4Q9H1E5 349 aaPredicted RBP14.24□□□□□ -0.13
PTPN18-212ENST00000483617 RWDD1Q9H446 243 aaPredicted RBP14.24□□□□□ -0.13
PTPN18-212ENST00000483617 ATP6V0A2Q9Y487 856 aa14.24□□□□□ -0.13
PTPN18-212ENST00000483617 JDP2Q8WYK2 163 aa14.23□□□□□ -0.13
PTPN18-212ENST00000483617 ZBTB40Q9NUA8 1239 aa14.23□□□□□ -0.13
PTPN18-212ENST00000483617 MAP3K2Q9Y2U5 619 aa14.23□□□□□ -0.13
PTPN18-212ENST00000483617 ATP5J2-PTCD1G3V325 749 aa14.22□□□□□ -0.13
PTPN18-212ENST00000483617 ZBTB7BO15156 539 aaPredicted RBP14.22□□□□□ -0.13
PTPN18-212ENST00000483617 ALDH1L1O75891 902 aa14.22□□□□□ -0.13
PTPN18-212ENST00000483617 POTEIP0CG38 1075 aa14.22□□□□□ -0.13
PTPN18-212ENST00000483617 POTEJP0CG39 1038 aa14.22□□□□□ -0.13
PTPN18-212ENST00000483617 CHADLQ6NUI6 762 aa14.22□□□□□ -0.13
PTPN18-212ENST00000483617 DDX46Q7L014 1031 aaKnown RBP14.22□□□□□ -0.13
PTPN18-212ENST00000483617 CENPQQ7L2Z9 268 aaPredicted RBP14.22□□□□□ -0.13
PTPN18-212ENST00000483617 LARGE2Q8N3Y3 721 aa14.22□□□□□ -0.13
PTPN18-212ENST00000483617 KLRG1Q96E93 195 aa14.22□□□□□ -0.13
PTPN18-212ENST00000483617 TAF1DQ9H5J8 278 aaPredicted RBP14.22□□□□□ -0.13
PTPN18-212ENST00000483617 BBOX1O75936 387 aa14.21□□□□□ -0.13
PTPN18-212ENST00000483617 GRAPQ13588 217 aa14.21□□□□□ -0.13
PTPN18-212ENST00000483617 LDHDQ86WU2 507 aa14.21□□□□□ -0.13
PTPN18-212ENST00000483617 GPC2Q8N158 579 aa14.21□□□□□ -0.13
PTPN18-212ENST00000483617 GRAPLQ8TC17 118 aaPredicted RBP14.21□□□□□ -0.13
PTPN18-212ENST00000483617 HACL1Q9UJ83 578 aa14.21□□□□□ -0.13
PTPN18-212ENST00000483617 LRRC37AA6NMS7 1700 aa14.21□□□□□ -0.14
PTPN18-212ENST00000483617 PPIP5K2O43314 1243 aa14.2□□□□□ -0.14
PTPN18-212ENST00000483617 EIF6P56537 245 aaKnown RBP14.2□□□□□ -0.14
PTPN18-212ENST00000483617 TRIM28Q13263 835 aaKnown RBP14.2□□□□□ -0.14
PTPN18-212ENST00000483617 SUPT20HQ8NEM7 779 aa14.2□□□□□ -0.14
PTPN18-212ENST00000483617 LINS1Q8NG48 757 aa14.2□□□□□ -0.14
PTPN18-212ENST00000483617 FAM89AQ96GI7 184 aa14.2□□□□□ -0.14
PTPN18-212ENST00000483617 C9orf78Q9NZ63 289 aaPredicted RBP14.2□□□□□ -0.14
PTPN18-212ENST00000483617 ADAMTSL1Q8N6G6 1762 aa14.19□□□□□ -0.14
PTPN18-212ENST00000483617 HMMRO75330 724 aa14.19□□□□□ -0.14
PTPN18-212ENST00000483617 GNAI2P04899 355 aa14.19□□□□□ -0.14
PTPN18-212ENST00000483617 UBTFL1P0CB47 393 aaPredicted RBP14.19□□□□□ -0.14
PTPN18-212ENST00000483617 EPHX2P34913 555 aa14.19□□□□□ -0.14
PTPN18-212ENST00000483617 AOC3Q16853 763 aa14.19□□□□□ -0.14
PTPN18-212ENST00000483617 DPP8Q6V1X1 898 aaPredicted RBP14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms