RNA–Protein interactions for RNA: ENST00000483560.1

SNX12-204, Transcript of sorting nexin 12, humanhuman

TSL 5

Gene SNX12, Length 700 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-204ENST00000483560 WWC3Q9ULE0 1092 aa8.6□□□□□ -1.03
SNX12-204ENST00000483560 PARP3Q9Y6F1 533 aa8.6□□□□□ -1.03
SNX12-204ENST00000483560 BTBD11A6QL63 1104 aa8.59□□□□□ -1.03
SNX12-204ENST00000483560 HOXA2O43364 376 aa8.59□□□□□ -1.03
SNX12-204ENST00000483560 CANXP27824 592 aaKnown RBP8.59□□□□□ -1.03
SNX12-204ENST00000483560 CRKLP46109 303 aaKnown RBP8.59□□□□□ -1.03
SNX12-204ENST00000483560 RALBP1Q15311 655 aa8.59□□□□□ -1.03
SNX12-204ENST00000483560 NLGN1Q8N2Q7 840 aa8.59□□□□□ -1.03
SNX12-204ENST00000483560 ATP10DQ9P241 1426 aa8.59□□□□□ -1.03
SNX12-204ENST00000483560 MAP3K5Q99683 1374 aa8.59□□□□□ -1.03
SNX12-204ENST00000483560 PLEKHG2Q9H7P9 1386 aa8.59□□□□□ -1.03
SNX12-204ENST00000483560 USP54Q70EL1 1684 aa8.59□□□□□ -1.03
SNX12-204ENST00000483560 MMP10P09238 476 aa8.58□□□□□ -1.04
SNX12-204ENST00000483560 MYSM1Q5VVJ2 828 aa8.58□□□□□ -1.04
SNX12-204ENST00000483560 MCM10Q7L590 875 aa8.58□□□□□ -1.04
SNX12-204ENST00000483560 DNAJC10Q8IXB1 793 aa8.58□□□□□ -1.04
SNX12-204ENST00000483560 NLGN2Q8NFZ4 835 aa8.58□□□□□ -1.04
SNX12-204ENST00000483560 GOPCQ9HD26 462 aa8.58□□□□□ -1.04
SNX12-204ENST00000483560 CCDC87Q9NVE4 849 aa8.58□□□□□ -1.04
SNX12-204ENST00000483560 RGPD3A6NKT7 1758 aaPredicted RBP8.58□□□□□ -1.04
SNX12-204ENST00000483560 LTN1O94822 1766 aa8.58□□□□□ -1.04
SNX12-204ENST00000483560 RGPD4Q7Z3J3 1758 aa8.58□□□□□ -1.04
SNX12-204ENST00000483560 PEAK1Q9H792 1746 aa8.57□□□□□ -1.04
SNX12-204ENST00000483560 NCAPD2Q15021 1401 aa8.57□□□□□ -1.04
SNX12-204ENST00000483560 MOXD2PA6NHM9 499 aa8.57□□□□□ -1.04
SNX12-204ENST00000483560 RPS6KA4O75676 772 aa8.57□□□□□ -1.04
SNX12-204ENST00000483560 GJA5P36382 358 aa8.57□□□□□ -1.04
SNX12-204ENST00000483560 SKIV2LQ15477 1246 aaKnown RBP8.57□□□□□ -1.04
SNX12-204ENST00000483560 TMEM132AQ24JP5 1023 aa8.57□□□□□ -1.04
SNX12-204ENST00000483560 PUS10Q3MIT2 529 aaKnown RBP8.57□□□□□ -1.04
SNX12-204ENST00000483560 SH3D19Q5HYK7 790 aa8.57□□□□□ -1.04
SNX12-204ENST00000483560 MORN1Q5T089 497 aa8.57□□□□□ -1.04
SNX12-204ENST00000483560 RC3H1Q5TC82 1133 aaKnown RBP8.57□□□□□ -1.04
SNX12-204ENST00000483560 PHACTR3Q96KR7 559 aa8.57□□□□□ -1.04
SNX12-204ENST00000483560 FMNL2Q96PY5 1086 aa8.57□□□□□ -1.04
SNX12-204ENST00000483560 TEX13AQ9BXU3 409 aaPredicted RBP8.57□□□□□ -1.04
SNX12-204ENST00000483560 KDRP35968 1356 aa8.57□□□□□ -1.04
SNX12-204ENST00000483560 SPTLC1O15269 473 aa8.56□□□□□ -1.04
SNX12-204ENST00000483560 NR1I2O75469 434 aa8.56□□□□□ -1.04
SNX12-204ENST00000483560 YBX3P16989 372 aaKnown RBP eCLIP8.56□□□□□ -1.04
SNX12-204ENST00000483560 RIC3Q7Z5B4 369 aa8.56□□□□□ -1.04
SNX12-204ENST00000483560 CD2APQ9Y5K6 639 aa8.56□□□□□ -1.04
SNX12-204ENST00000483560 CNTNAP4Q9C0A0 1308 aa8.55□□□□□ -1.04
SNX12-204ENST00000483560 KDM6AO15550 1401 aaPredicted RBP8.55□□□□□ -1.04
SNX12-204ENST00000483560 SHANK3Q9BYB0 1731 aa8.55□□□□□ -1.04
SNX12-204ENST00000483560 KIF20BQ96Q89 1820 aa8.55□□□□□ -1.04
SNX12-204ENST00000483560 A0A087WZG4 1122 aa8.55□□□□□ -1.04
SNX12-204ENST00000483560 FDX1P10109 184 aa8.55□□□□□ -1.04
SNX12-204ENST00000483560 NDUFV2P19404 249 aa8.55□□□□□ -1.04
SNX12-204ENST00000483560 COPS2P61201 443 aa8.55□□□□□ -1.04
SNX12-204ENST00000483560 DCTN1Q14203 1278 aa8.55□□□□□ -1.04
SNX12-204ENST00000483560 RSBN1LQ6PCB5 846 aaPredicted RBP8.55□□□□□ -1.04
SNX12-204ENST00000483560 ZNF790Q6PG37 636 aa8.55□□□□□ -1.04
SNX12-204ENST00000483560 BLOC1S3Q6QNY0 202 aa8.55□□□□□ -1.04
SNX12-204ENST00000483560 BICDL1Q6ZP65 573 aa8.55□□□□□ -1.04
SNX12-204ENST00000483560 IL17REQ8NFR9 667 aa8.55□□□□□ -1.04
SNX12-204ENST00000483560 SLC4A9Q96Q91 983 aa8.55□□□□□ -1.04
SNX12-204ENST00000483560 MTRQ99707 1265 aa8.55□□□□□ -1.04
SNX12-204ENST00000483560 POLR3EQ9NVU0 708 aa8.55□□□□□ -1.04
SNX12-204ENST00000483560 SRP68Q9UHB9 627 aaKnown RBP8.55□□□□□ -1.04
SNX12-204ENST00000483560 LAS1LQ9Y4W2 734 aaKnown RBP8.55□□□□□ -1.04
SNX12-204ENST00000483560 NHSQ6T4R5 1651 aa8.55□□□□□ -1.04
SNX12-204ENST00000483560 FAM208AQ9UK61 1670 aaKnown RBP8.55□□□□□ -1.04
SNX12-204ENST00000483560 MYBBP1AQ9BQG0 1328 aaKnown RBP8.54□□□□□ -1.04
SNX12-204ENST00000483560 SBF2Q86WG5 1849 aa8.54□□□□□ -1.04
SNX12-204ENST00000483560 CLK2P49760 499 aaKnown RBP8.54□□□□□ -1.04
SNX12-204ENST00000483560 TJAP1Q5JTD0 557 aa8.54□□□□□ -1.04
SNX12-204ENST00000483560 USPL1Q5W0Q7 1092 aa8.54□□□□□ -1.04
SNX12-204ENST00000483560 AMIGO3Q86WK7 504 aa8.54□□□□□ -1.04
SNX12-204ENST00000483560 SCUBE3Q8IX30 993 aa8.54□□□□□ -1.04
SNX12-204ENST00000483560 PNISRQ8TF01 805 aaKnown RBP8.54□□□□□ -1.04
SNX12-204ENST00000483560 HLA-CQ95604 372 aa8.54□□□□□ -1.04
SNX12-204ENST00000483560 IL21Q9HBE4 155 aa8.54□□□□□ -1.04
SNX12-204ENST00000483560 SLC27A5Q9Y2P5 690 aa8.54□□□□□ -1.04
SNX12-204ENST00000483560 HTATSF1O43719 755 aaKnown RBP8.53□□□□□ -1.04
SNX12-204ENST00000483560 SNRPA1P09661 255 aaKnown RBP8.53□□□□□ -1.04
SNX12-204ENST00000483560 CYP19A1P11511 503 aaPredicted RBP8.53□□□□□ -1.04
SNX12-204ENST00000483560 GYS1P13807 737 aa8.53□□□□□ -1.04
SNX12-204ENST00000483560 RIPK4P57078 832 aa8.53□□□□□ -1.04
SNX12-204ENST00000483560 LMOD3Q0VAK6 560 aa8.53□□□□□ -1.04
SNX12-204ENST00000483560 TAF7Q15545 349 aaPredicted RBP8.53□□□□□ -1.04
SNX12-204ENST00000483560 NFE2L2Q16236 605 aa8.53□□□□□ -1.04
SNX12-204ENST00000483560 TUSC1Q2TAM9 212 aa8.53□□□□□ -1.04
SNX12-204ENST00000483560 Q3C1V9 767 aa8.53□□□□□ -1.04
SNX12-204ENST00000483560 INTS5Q6P9B9 1019 aaKnown RBP8.53□□□□□ -1.04
SNX12-204ENST00000483560 CCDC146Q8IYE0 955 aa8.53□□□□□ -1.04
SNX12-204ENST00000483560 TNS4Q8IZW8 715 aa8.53□□□□□ -1.04
SNX12-204ENST00000483560 NGEFQ8N5V2 710 aa8.53□□□□□ -1.04
SNX12-204ENST00000483560 ZNF496Q96IT1 587 aaPredicted RBP8.53□□□□□ -1.04
SNX12-204ENST00000483560 PLSCR2Q9NRY7 297 aa8.53□□□□□ -1.04
SNX12-204ENST00000483560 MIS18AQ9NYP9 233 aa8.53□□□□□ -1.04
SNX12-204ENST00000483560 BCS1LQ9Y276 419 aa8.53□□□□□ -1.04
SNX12-204ENST00000483560 A0A0G2JLW4 131 aa8.52□□□□□ -1.05
SNX12-204ENST00000483560 ANP32CO43423 234 aa8.52□□□□□ -1.05
SNX12-204ENST00000483560 GTF2E1P29083 439 aaPredicted RBP8.52□□□□□ -1.05
SNX12-204ENST00000483560 GUCA2AQ02747 115 aa8.52□□□□□ -1.05
SNX12-204ENST00000483560 COL13A1Q5TAT6 717 aaPredicted RBP8.52□□□□□ -1.05
SNX12-204ENST00000483560 PCMTD1Q96MG8 357 aaPredicted RBP8.52□□□□□ -1.05
SNX12-204ENST00000483560 LIMD1Q9UGP4 676 aa8.52□□□□□ -1.05
SNX12-204ENST00000483560 TSPYL4Q9UJ04 414 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms