RNA–Protein interactions for RNA: ENST00000483502.2

CNTNAP3-210, Transcript of contactin associated protein like 3, human

TSL 5

Gene CNTNAP3, Length 770 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNTNAP3-210	ENST00000483502	HHIPL1	Q96JK4	782 aa		13.68	□□□□□ -0.22
CNTNAP3-210	ENST00000483502	ZIC5	Q96T25	663 aa		13.68	□□□□□ -0.22
CNTNAP3-210	ENST00000483502	BEGAIN	Q9BUH8	593 aa		13.68	□□□□□ -0.22
CNTNAP3-210	ENST00000483502	UTP14A	Q9BVJ6	771 aa	Known RBP	13.68	□□□□□ -0.22
CNTNAP3-210	ENST00000483502	DUOX1	Q9NRD9	1551 aa		13.67	□□□□□ -0.22
CNTNAP3-210	ENST00000483502	RAD17	O75943	681 aa		13.67	□□□□□ -0.22
CNTNAP3-210	ENST00000483502	CIAPIN1	Q6FI81	312 aa		13.67	□□□□□ -0.22
CNTNAP3-210	ENST00000483502	DLK2	Q6UY11	383 aa		13.67	□□□□□ -0.22
CNTNAP3-210	ENST00000483502	POLR2A	P24928	1970 aa	Known RBP	13.67	□□□□□ -0.22
CNTNAP3-210	ENST00000483502	BBOX1	O75936	387 aa		13.66	□□□□□ -0.22
CNTNAP3-210	ENST00000483502	HCLS1	P14317	486 aa	Predicted RBP	13.66	□□□□□ -0.22
CNTNAP3-210	ENST00000483502	EIF2S2	P20042	333 aa	Known RBP	13.66	□□□□□ -0.22
CNTNAP3-210	ENST00000483502	MLLT1	Q03111	559 aa	Predicted RBP	13.66	□□□□□ -0.22
CNTNAP3-210	ENST00000483502	DPP8	Q6V1X1	898 aa	Predicted RBP	13.66	□□□□□ -0.22
CNTNAP3-210	ENST00000483502	NLRP10	Q86W26	655 aa		13.66	□□□□□ -0.22
CNTNAP3-210	ENST00000483502	MPND	Q8N594	471 aa		13.66	□□□□□ -0.22
CNTNAP3-210	ENST00000483502	SUPT20H	Q8NEM7	779 aa		13.66	□□□□□ -0.22
CNTNAP3-210	ENST00000483502	ZC3H15	Q8WU90	426 aa	Known RBP	13.66	□□□□□ -0.22
CNTNAP3-210	ENST00000483502	MCOLN1	Q9GZU1	580 aa		13.66	□□□□□ -0.22
CNTNAP3-210	ENST00000483502	BRPF1	P55201	1214 aa	Predicted RBP	13.65	□□□□□ -0.22
CNTNAP3-210	ENST00000483502	CNOT7	Q9UIV1	285 aa	Known RBP	13.65	□□□□□ -0.22
CNTNAP3-210	ENST00000483502	TSPYL4	Q9UJ04	414 aa		13.65	□□□□□ -0.22
CNTNAP3-210	ENST00000483502	COL4A1	P02462	1669 aa		13.65	□□□□□ -0.22
CNTNAP3-210	ENST00000483502	CDHR2	Q9BYE9	1310 aa		13.64	□□□□□ -0.23
CNTNAP3-210	ENST00000483502	LRRC37A	A6NMS7	1700 aa		13.64	□□□□□ -0.23
CNTNAP3-210	ENST00000483502	GRAP	Q13588	217 aa		13.64	□□□□□ -0.23
CNTNAP3-210	ENST00000483502	CDC37L1	Q7L3B6	337 aa		13.64	□□□□□ -0.23
CNTNAP3-210	ENST00000483502	COPS6	Q7L5N1	327 aa		13.64	□□□□□ -0.23
CNTNAP3-210	ENST00000483502	GRAPL	Q8TC17	118 aa	Predicted RBP	13.64	□□□□□ -0.23
CNTNAP3-210	ENST00000483502	CA12	O43570	354 aa		13.63	□□□□□ -0.23
CNTNAP3-210	ENST00000483502	EGFR	P00533	1210 aa		13.63	□□□□□ -0.23
CNTNAP3-210	ENST00000483502	NEFM	P07197	916 aa		13.63	□□□□□ -0.23
CNTNAP3-210	ENST00000483502	TCIRG1	Q13488	830 aa		13.63	□□□□□ -0.23
CNTNAP3-210	ENST00000483502	USP48	Q86UV5	1035 aa		13.63	□□□□□ -0.23
CNTNAP3-210	ENST00000483502	XAGE3	Q8WTP9	111 aa		13.63	□□□□□ -0.23
CNTNAP3-210	ENST00000483502	BCL2L13	Q9BXK5	485 aa		13.63	□□□□□ -0.23
CNTNAP3-210	ENST00000483502	TMX4	Q9H1E5	349 aa	Predicted RBP	13.63	□□□□□ -0.23
CNTNAP3-210	ENST00000483502	ZNF408	Q9H9D4	720 aa		13.63	□□□□□ -0.23
CNTNAP3-210	ENST00000483502	ZBTB12	Q9Y330	459 aa	Predicted RBP	13.63	□□□□□ -0.23
CNTNAP3-210	ENST00000483502	DDX60	Q8IY21	1712 aa	Known RBP	13.63	□□□□□ -0.23
CNTNAP3-210	ENST00000483502	FAM155A	B1AL88	458 aa	Predicted RBP	13.62	□□□□□ -0.23
CNTNAP3-210	ENST00000483502	TNIP1	Q15025	636 aa		13.62	□□□□□ -0.23
CNTNAP3-210	ENST00000483502	SAMD7	Q7Z3H4	446 aa		13.62	□□□□□ -0.23
CNTNAP3-210	ENST00000483502	MICALL2	Q8IY33	904 aa		13.62	□□□□□ -0.23
CNTNAP3-210	ENST00000483502	NECTIN2	Q92692	538 aa		13.62	□□□□□ -0.23
CNTNAP3-210	ENST00000483502	ZNF428	Q96B54	188 aa		13.62	□□□□□ -0.23
CNTNAP3-210	ENST00000483502	TRMT112	Q9UI30	125 aa	Known RBP	13.62	□□□□□ -0.23
CNTNAP3-210	ENST00000483502	PSMD14	O00487	310 aa		13.61	□□□□□ -0.23
CNTNAP3-210	ENST00000483502	AIMP1	Q12904	312 aa	Known RBP	13.61	□□□□□ -0.23
CNTNAP3-210	ENST00000483502	KRT24	Q2M2I5	525 aa		13.61	□□□□□ -0.23
CNTNAP3-210	ENST00000483502	HSP90AB3P	Q58FF7	597 aa		13.61	□□□□□ -0.23
CNTNAP3-210	ENST00000483502	DDX46	Q7L014	1031 aa	Known RBP	13.61	□□□□□ -0.23
CNTNAP3-210	ENST00000483502	DPF2	Q92785	391 aa		13.61	□□□□□ -0.23
CNTNAP3-210	ENST00000483502	KCNQ5	Q9NR82	932 aa		13.61	□□□□□ -0.23
CNTNAP3-210	ENST00000483502	BABAM1	Q9NWV8	329 aa		13.61	□□□□□ -0.23
CNTNAP3-210	ENST00000483502	SH3TC1	Q8TE82	1336 aa		13.61	□□□□□ -0.23
CNTNAP3-210	ENST00000483502	PDE4DIP	Q5VU43	2346 aa		13.61	□□□□□ -0.23
CNTNAP3-210	ENST00000483502		H7C1D1	291 aa		13.6	□□□□□ -0.23
CNTNAP3-210	ENST00000483502	HUNK	P57058	714 aa		13.6	□□□□□ -0.23
CNTNAP3-210	ENST00000483502	RIPK4	P57078	832 aa		13.6	□□□□□ -0.23
CNTNAP3-210	ENST00000483502	NOG	Q13253	232 aa		13.6	□□□□□ -0.23
CNTNAP3-210	ENST00000483502	DGKZ	Q13574	1117 aa		13.6	□□□□□ -0.23
CNTNAP3-210	ENST00000483502	CELF1	Q92879	486 aa	Known RBP	13.6	□□□□□ -0.23
CNTNAP3-210	ENST00000483502	POLL	Q9UGP5	575 aa		13.6	□□□□□ -0.23
CNTNAP3-210	ENST00000483502	MAPK8IP3	Q9UPT6	1336 aa		13.6	□□□□□ -0.23
CNTNAP3-210	ENST00000483502	SCN9A	Q15858	1988 aa		13.6	□□□□□ -0.23
CNTNAP3-210	ENST00000483502	RTL9	Q8NET4	1388 aa		13.59	□□□□□ -0.23
CNTNAP3-210	ENST00000483502	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	13.59	□□□□□ -0.23
CNTNAP3-210	ENST00000483502	ISCA1	Q9BUE6	129 aa		13.59	□□□□□ -0.23
CNTNAP3-210	ENST00000483502	DBNDD1	Q9H9R9	158 aa		13.59	□□□□□ -0.23
CNTNAP3-210	ENST00000483502	MKI67	P46013	3256 aa	Known RBP	13.59	□□□□□ -0.23
CNTNAP3-210	ENST00000483502	TMPO	P42166	694 aa	Known RBP	13.58	□□□□□ -0.24
CNTNAP3-210	ENST00000483502	SF3B3	Q15393	1217 aa	Known RBP	13.58	□□□□□ -0.24
CNTNAP3-210	ENST00000483502	WASHC4	Q2M389	1173 aa		13.58	□□□□□ -0.24
CNTNAP3-210	ENST00000483502	TMC4	Q7Z404	712 aa		13.58	□□□□□ -0.24
CNTNAP3-210	ENST00000483502	PNN	Q9H307	717 aa	Known RBP	13.58	□□□□□ -0.24
CNTNAP3-210	ENST00000483502	ADM5	C9JUS6	153 aa		13.57	□□□□□ -0.24
CNTNAP3-210	ENST00000483502	CHL1	O00533	1208 aa		13.57	□□□□□ -0.24
CNTNAP3-210	ENST00000483502	RIMBP2	O15034	1052 aa		13.57	□□□□□ -0.24
CNTNAP3-210	ENST00000483502	GPSM2	P81274	684 aa		13.57	□□□□□ -0.24
CNTNAP3-210	ENST00000483502	RGMB	Q6NW40	437 aa		13.57	□□□□□ -0.24
CNTNAP3-210	ENST00000483502	KRT26	Q7Z3Y9	468 aa		13.57	□□□□□ -0.24
CNTNAP3-210	ENST00000483502	FAM89A	Q96GI7	184 aa		13.57	□□□□□ -0.24
CNTNAP3-210	ENST00000483502	GBA2	Q9HCG7	927 aa	Predicted RBP	13.57	□□□□□ -0.24
CNTNAP3-210	ENST00000483502	NSFL1C	Q9UNZ2	370 aa	Known RBP	13.57	□□□□□ -0.24
CNTNAP3-210	ENST00000483502	KIF23	Q02241	960 aa	Predicted RBP	13.56	□□□□□ -0.24
CNTNAP3-210	ENST00000483502	DOK7	Q18PE1	504 aa		13.56	□□□□□ -0.24
CNTNAP3-210	ENST00000483502	CFAP44	Q96MT7	982 aa		13.56	□□□□□ -0.24
CNTNAP3-210	ENST00000483502	CHPF2	Q9P2E5	772 aa		13.56	□□□□□ -0.24
CNTNAP3-210	ENST00000483502	ASTN2	O75129	1339 aa	Predicted RBP	13.56	□□□□□ -0.24
CNTNAP3-210	ENST00000483502	HTT	P42858	3142 aa		13.56	□□□□□ -0.24
CNTNAP3-210	ENST00000483502	CENPF	P49454	3210 aa		13.56	□□□□□ -0.24
CNTNAP3-210	ENST00000483502	AKAP11	Q9UKA4	1901 aa		13.55	□□□□□ -0.24
CNTNAP3-210	ENST00000483502	ATP5J2-PTCD1	G3V325	749 aa		13.55	□□□□□ -0.24
CNTNAP3-210	ENST00000483502	ECE2	O60344	883 aa		13.55	□□□□□ -0.24
CNTNAP3-210	ENST00000483502	RBM26	Q5T8P6	1007 aa	Known RBP	13.55	□□□□□ -0.24
CNTNAP3-210	ENST00000483502	PLBD2	Q8NHP8	589 aa		13.55	□□□□□ -0.24
CNTNAP3-210	ENST00000483502	TBC1D16	Q8TBP0	767 aa		13.55	□□□□□ -0.24
CNTNAP3-210	ENST00000483502	RNF186	Q9NXI6	227 aa		13.55	□□□□□ -0.24
CNTNAP3-210	ENST00000483502	C6orf229	H3BNL8	230 aa		13.54	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms