RNA–Protein interactions for RNA: ENST00000483415.5

EWSR1-217, Transcript of EWS RNA binding protein 1, humanhuman

TSL 1 (best)

Gene EWSR1, Length 3,231 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-217ENST00000483415 NLRP10Q86W26 655 aa13.18□□□□□ -0.3
EWSR1-217ENST00000483415 MYD88Q99836 296 aa13.18□□□□□ -0.3
EWSR1-217ENST00000483415 TNNQ9UQP3 1299 aa13.18□□□□□ -0.3
EWSR1-217ENST00000483415 RAB11FIP3O75154 756 aa13.18□□□□□ -0.3
EWSR1-217ENST00000483415 PTF1AQ7RTS3 328 aa13.18□□□□□ -0.3
EWSR1-217ENST00000483415 F6X3S4 739 aa13.17□□□□□ -0.3
EWSR1-217ENST00000483415 ZSCAN20P17040 1043 aaPredicted RBP13.17□□□□□ -0.3
EWSR1-217ENST00000483415 TICAM2Q86XR7 235 aa13.17□□□□□ -0.3
EWSR1-217ENST00000483415 SPRYD3Q8NCJ5 442 aa13.17□□□□□ -0.3
EWSR1-217ENST00000483415 DCTPP1Q9H773 170 aa13.17□□□□□ -0.3
EWSR1-217ENST00000483415 DUOX1Q9NRD9 1551 aa13.17□□□□□ -0.3
EWSR1-217ENST00000483415 CSF1RP07333 972 aa13.17□□□□□ -0.3
EWSR1-217ENST00000483415 MTERF4Q7Z6M4 381 aaKnown RBP13.17□□□□□ -0.3
EWSR1-217ENST00000483415 NECTIN2Q92692 538 aa13.17□□□□□ -0.3
EWSR1-217ENST00000483415 KIAA1551Q9HCM1 1747 aa13.17□□□□□ -0.3
EWSR1-217ENST00000483415 MEIS3Q99687 375 aa13.17□□□□□ -0.3
EWSR1-217ENST00000483415 TNRC6CQ9HCJ0 1690 aaKnown RBP13.16□□□□□ -0.3
EWSR1-217ENST00000483415 GNPATO15228 680 aa13.16□□□□□ -0.3
EWSR1-217ENST00000483415 ZPR1O75312 459 aa13.16□□□□□ -0.3
EWSR1-217ENST00000483415 ERC1Q8IUD2 1116 aa13.16□□□□□ -0.3
EWSR1-217ENST00000483415 BCL2L12Q9HB09 334 aa13.16□□□□□ -0.3
EWSR1-217ENST00000483415 CIAO1O76071 339 aa13.15□□□□□ -0.3
EWSR1-217ENST00000483415 NTSR2O95665 410 aa13.15□□□□□ -0.3
EWSR1-217ENST00000483415 C9orf78Q9NZ63 289 aaPredicted RBP13.15□□□□□ -0.3
EWSR1-217ENST00000483415 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.15□□□□□ -0.3
EWSR1-217ENST00000483415 ZNF500O60304 480 aaPredicted RBP13.15□□□□□ -0.3
EWSR1-217ENST00000483415 ANXA1P04083 346 aa13.15□□□□□ -0.3
EWSR1-217ENST00000483415 TM4SF1P30408 202 aa13.15□□□□□ -0.3
EWSR1-217ENST00000483415 SLC4A10Q6U841 1118 aa13.15□□□□□ -0.3
EWSR1-217ENST00000483415 ARHGEF1Q92888 912 aaKnown RBP13.15□□□□□ -0.3
EWSR1-217ENST00000483415 UTP14AQ9BVJ6 771 aaKnown RBP13.15□□□□□ -0.3
EWSR1-217ENST00000483415 STK32BQ9NY57 414 aa13.15□□□□□ -0.3
EWSR1-217ENST00000483415 PCDHB15Q9Y5E8 787 aa13.15□□□□□ -0.3
EWSR1-217ENST00000483415 AOX1Q06278 1338 aa13.15□□□□□ -0.3
EWSR1-217ENST00000483415 NLGN1Q8N2Q7 840 aa13.15□□□□□ -0.31
EWSR1-217ENST00000483415 BBXQ8WY36 941 aaPredicted RBP13.15□□□□□ -0.31
EWSR1-217ENST00000483415 R3HCC1Q9Y3T6 440 aaKnown RBP13.15□□□□□ -0.31
EWSR1-217ENST00000483415 LTBP1Q14766 1721 aa13.14□□□□□ -0.31
EWSR1-217ENST00000483415 DYNC1I1O14576 645 aa13.14□□□□□ -0.31
EWSR1-217ENST00000483415 AIMP1Q12904 312 aaKnown RBP13.14□□□□□ -0.31
EWSR1-217ENST00000483415 COPRSQ9NQ92 184 aa13.14□□□□□ -0.31
EWSR1-217ENST00000483415 PRDM10Q9NQV6 1147 aa13.14□□□□□ -0.31
EWSR1-217ENST00000483415 SH3TC1Q8TE82 1336 aa13.14□□□□□ -0.31
EWSR1-217ENST00000483415 ABCC12Q96J65 1359 aa13.14□□□□□ -0.31
EWSR1-217ENST00000483415 PDE8AO60658 829 aa13.14□□□□□ -0.31
EWSR1-217ENST00000483415 SLC15A2Q16348 729 aa13.14□□□□□ -0.31
EWSR1-217ENST00000483415 UPF2Q9HAU5 1272 aaKnown RBP13.14□□□□□ -0.31
EWSR1-217ENST00000483415 GPR108Q9NPR9 543 aa13.14□□□□□ -0.31
EWSR1-217ENST00000483415 UQCRHLA0A096LP55 91 aa13.13□□□□□ -0.31
EWSR1-217ENST00000483415 KLRG2A4D1S0 409 aaPredicted RBP13.13□□□□□ -0.31
EWSR1-217ENST00000483415 UQCRHP07919 91 aa13.13□□□□□ -0.31
EWSR1-217ENST00000483415 RFC4P35249 363 aa13.13□□□□□ -0.31
EWSR1-217ENST00000483415 FOXO4P98177 505 aa13.13□□□□□ -0.31
EWSR1-217ENST00000483415 SF3B3Q15393 1217 aaKnown RBP13.13□□□□□ -0.31
EWSR1-217ENST00000483415 UBN2Q6ZU65 1347 aa13.13□□□□□ -0.31
EWSR1-217ENST00000483415 IGSF3O75054 1194 aa13.13□□□□□ -0.31
EWSR1-217ENST00000483415 HS1BP3Q53T59 392 aa13.13□□□□□ -0.31
EWSR1-217ENST00000483415 BRCA1P38398 1863 aaKnown RBP13.13□□□□□ -0.31
EWSR1-217ENST00000483415 PDIA4P13667 645 aaKnown RBP13.13□□□□□ -0.31
EWSR1-217ENST00000483415 HLFQ16534 295 aa13.13□□□□□ -0.31
EWSR1-217ENST00000483415 FAM182BQ5T319 152 aa13.13□□□□□ -0.31
EWSR1-217ENST00000483415 PNPLA7Q6ZV29 1317 aa13.12□□□□□ -0.31
EWSR1-217ENST00000483415 KAZALD1Q96I82 304 aa13.12□□□□□ -0.31
EWSR1-217ENST00000483415 COL11A2P13942 1736 aaPredicted RBP13.12□□□□□ -0.31
EWSR1-217ENST00000483415 SIRT2Q8IXJ6 389 aa13.12□□□□□ -0.31
EWSR1-217ENST00000483415 CCDC94Q9BW85 323 aaPredicted RBP13.12□□□□□ -0.31
EWSR1-217ENST00000483415 ZBTB3Q9H5J0 574 aa13.12□□□□□ -0.31
EWSR1-217ENST00000483415 GYS1P13807 737 aa13.11□□□□□ -0.31
EWSR1-217ENST00000483415 CWF19L2Q2TBE0 894 aaKnown RBP13.11□□□□□ -0.31
EWSR1-217ENST00000483415 TMC4Q7Z404 712 aa13.11□□□□□ -0.31
EWSR1-217ENST00000483415 SUCLG2Q96I99 432 aa13.11□□□□□ -0.31
EWSR1-217ENST00000483415 NOL7Q9UMY1 257 aaKnown RBP13.11□□□□□ -0.31
EWSR1-217ENST00000483415 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.11□□□□□ -0.31
EWSR1-217ENST00000483415 NBPF7P0C2Y1 421 aaPredicted RBP13.11□□□□□ -0.31
EWSR1-217ENST00000483415 NUCB1Q02818 461 aa13.11□□□□□ -0.31
EWSR1-217ENST00000483415 TNPO1Q92973 898 aaKnown RBP13.11□□□□□ -0.31
EWSR1-217ENST00000483415 LRRFIP2Q9Y608 721 aaKnown RBP13.11□□□□□ -0.31
EWSR1-217ENST00000483415 MSNP26038 577 aaKnown RBP13.11□□□□□ -0.31
EWSR1-217ENST00000483415 RFX5P48382 616 aaPredicted RBP13.11□□□□□ -0.31
EWSR1-217ENST00000483415 ZNF827Q17R98 1081 aa13.11□□□□□ -0.31
EWSR1-217ENST00000483415 NASPP49321 788 aaPredicted RBP13.1□□□□□ -0.31
EWSR1-217ENST00000483415 SKOR2Q2VWA4 1001 aaPredicted RBP13.1□□□□□ -0.31
EWSR1-217ENST00000483415 AK9Q5TCS8 1911 aa13.1□□□□□ -0.31
EWSR1-217ENST00000483415 SETDB2Q96T68 719 aa13.1□□□□□ -0.31
EWSR1-217ENST00000483415 C10orf71Q711Q0 1435 aa13.1□□□□□ -0.31
EWSR1-217ENST00000483415 CTSWP56202 376 aa13.09□□□□□ -0.31
EWSR1-217ENST00000483415 USPL1Q5W0Q7 1092 aa13.09□□□□□ -0.31
EWSR1-217ENST00000483415 TPTE2Q6XPS3 522 aa13.09□□□□□ -0.31
EWSR1-217ENST00000483415 UPF1Q92900 1129 aaKnown RBP eCLIP13.09□□□□□ -0.31
EWSR1-217ENST00000483415 OSBPL3Q9H4L5 887 aa13.09□□□□□ -0.31
EWSR1-217ENST00000483415 NIP7Q9Y221 180 aaKnown RBP eCLIP13.09□□□□□ -0.31
EWSR1-217ENST00000483415 PPP4R3BQ5MIZ7 849 aa13.09□□□□□ -0.31
EWSR1-217ENST00000483415 SUSD4Q5VX71 490 aa13.09□□□□□ -0.31
EWSR1-217ENST00000483415 TBC1D2BQ9UPU7 963 aa13.09□□□□□ -0.31
EWSR1-217ENST00000483415 ARFGEF1Q9Y6D6 1849 aa13.08□□□□□ -0.31
EWSR1-217ENST00000483415 RAB3GAP1Q15042 981 aa13.08□□□□□ -0.32
EWSR1-217ENST00000483415 EZH2Q15910 746 aaKnown RBP13.08□□□□□ -0.32
EWSR1-217ENST00000483415 PDLIM2Q96JY6 352 aa13.08□□□□□ -0.32
EWSR1-217ENST00000483415 DOCK2Q92608 1830 aa13.08□□□□□ -0.32
EWSR1-217ENST00000483415 C22orf23Q9BZE7 217 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms