RNA–Protein interactions for RNA: ENST00000483145.1

CCDC57-209, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-209ENST00000483145 JARID2Q92833 1246 aaPredicted RBP13.14□□□□□ -0.31
CCDC57-209ENST00000483145 KAZALD1Q96I82 304 aa13.14□□□□□ -0.31
CCDC57-209ENST00000483145 GPBP1L1Q9HC44 474 aaPredicted RBP13.14□□□□□ -0.31
CCDC57-209ENST00000483145 PIM2Q9P1W9 311 aa13.14□□□□□ -0.31
CCDC57-209ENST00000483145 LRRFIP2Q9Y608 721 aaKnown RBP13.14□□□□□ -0.31
CCDC57-209ENST00000483145 NPHP1O15259 732 aa13.13□□□□□ -0.31
CCDC57-209ENST00000483145 ARHGAP27Q6ZUM4 889 aa13.13□□□□□ -0.31
CCDC57-209ENST00000483145 ZNF526Q8TF50 670 aaPredicted RBP13.13□□□□□ -0.31
CCDC57-209ENST00000483145 BICC1Q9H694 974 aaKnown RBP13.13□□□□□ -0.31
CCDC57-209ENST00000483145 KIAA1551Q9HCM1 1747 aa13.13□□□□□ -0.31
CCDC57-209ENST00000483145 PDE8AO60658 829 aa13.12□□□□□ -0.31
CCDC57-209ENST00000483145 HCLS1P14317 486 aaPredicted RBP13.12□□□□□ -0.31
CCDC57-209ENST00000483145 CTSWP56202 376 aa13.12□□□□□ -0.31
CCDC57-209ENST00000483145 FOXO4P98177 505 aa13.12□□□□□ -0.31
CCDC57-209ENST00000483145 MTX1Q13505 466 aa13.12□□□□□ -0.31
CCDC57-209ENST00000483145 RABL6Q3YEC7 729 aaPredicted RBP13.12□□□□□ -0.31
CCDC57-209ENST00000483145 ANKRD44Q8N8A2 993 aa13.12□□□□□ -0.31
CCDC57-209ENST00000483145 C1orf115Q9H7X2 142 aa13.12□□□□□ -0.31
CCDC57-209ENST00000483145 RTL9Q8NET4 1388 aa13.11□□□□□ -0.31
CCDC57-209ENST00000483145 DALRD3Q5D0E6 543 aaKnown RBP13.11□□□□□ -0.31
CCDC57-209ENST00000483145 EPHA10Q5JZY3 1008 aa13.11□□□□□ -0.31
CCDC57-209ENST00000483145 CEP85Q6P2H3 762 aa13.11□□□□□ -0.31
CCDC57-209ENST00000483145 BRIP1Q9BX63 1249 aa13.11□□□□□ -0.31
CCDC57-209ENST00000483145 COL11A2P13942 1736 aaPredicted RBP13.1□□□□□ -0.31
CCDC57-209ENST00000483145 KLRG2A4D1S0 409 aaPredicted RBP13.1□□□□□ -0.31
CCDC57-209ENST00000483145 CSF1RP07333 972 aa13.1□□□□□ -0.31
CCDC57-209ENST00000483145 KCNA3P22001 575 aa13.1□□□□□ -0.31
CCDC57-209ENST00000483145 CHRNA5P30532 468 aa13.1□□□□□ -0.31
CCDC57-209ENST00000483145 RPAP2Q8IXW5 612 aaPredicted RBP13.1□□□□□ -0.31
CCDC57-209ENST00000483145 DLEC1Q9Y238 1755 aa13.09□□□□□ -0.31
CCDC57-209ENST00000483145 BRCA1P38398 1863 aaKnown RBP13.09□□□□□ -0.31
CCDC57-209ENST00000483145 SF3B3Q15393 1217 aaKnown RBP13.09□□□□□ -0.31
CCDC57-209ENST00000483145 CRY2Q49AN0 593 aa13.09□□□□□ -0.31
CCDC57-209ENST00000483145 CCDC152Q4G0S7 254 aa13.09□□□□□ -0.31
CCDC57-209ENST00000483145 LMBR1LQ6UX01 489 aa13.09□□□□□ -0.31
CCDC57-209ENST00000483145 CCDC24Q8N4L8 307 aa13.09□□□□□ -0.31
CCDC57-209ENST00000483145 TTLL11Q8NHH1 800 aa13.09□□□□□ -0.31
CCDC57-209ENST00000483145 NLRP3Q96P20 1036 aa13.09□□□□□ -0.31
CCDC57-209ENST00000483145 PCDHB15Q9Y5E8 787 aa13.09□□□□□ -0.31
CCDC57-209ENST00000483145 PDE6BP35913 854 aa13.08□□□□□ -0.32
CCDC57-209ENST00000483145 ATP8B2P98198 1209 aa13.08□□□□□ -0.32
CCDC57-209ENST00000483145 C3orf67Q6ZVT6 689 aa13.08□□□□□ -0.32
CCDC57-209ENST00000483145 PDZRN3Q9UPQ7 1066 aa13.08□□□□□ -0.32
CCDC57-209ENST00000483145 ARFGEF1Q9Y6D6 1849 aa13.08□□□□□ -0.32
CCDC57-209ENST00000483145 SRGAP3O43295 1099 aa13.07□□□□□ -0.32
CCDC57-209ENST00000483145 HMMRO75330 724 aa13.07□□□□□ -0.32
CCDC57-209ENST00000483145 POLA2Q14181 598 aa13.07□□□□□ -0.32
CCDC57-209ENST00000483145 FAM161AQ3B820 660 aa13.07□□□□□ -0.32
CCDC57-209ENST00000483145 SIRT2Q8IXJ6 389 aa13.07□□□□□ -0.32
CCDC57-209ENST00000483145 SSH3Q8TE77 659 aa13.07□□□□□ -0.32
CCDC57-209ENST00000483145 GREM2Q9H772 168 aa13.07□□□□□ -0.32
CCDC57-209ENST00000483145 PNMA6EA0A0J9YXQ4 647 aa13.06□□□□□ -0.32
CCDC57-209ENST00000483145 H0YIN7 160 aa13.06□□□□□ -0.32
CCDC57-209ENST00000483145 IFIT5Q13325 482 aaKnown RBP13.06□□□□□ -0.32
CCDC57-209ENST00000483145 HDAC1Q13547 482 aaPredicted RBP13.06□□□□□ -0.32
CCDC57-209ENST00000483145 C2CD5Q86YS7 1000 aa13.06□□□□□ -0.32
CCDC57-209ENST00000483145 CHMP3Q9Y3E7 222 aa13.06□□□□□ -0.32
CCDC57-209ENST00000483145 TAF1P21675 1872 aa13.06□□□□□ -0.32
CCDC57-209ENST00000483145 SPEF2Q9C093 1822 aa13.05□□□□□ -0.32
CCDC57-209ENST00000483145 ANKRD18BA2A2Z9 1011 aa13.05□□□□□ -0.32
CCDC57-209ENST00000483145 SRGNP10124 158 aa13.05□□□□□ -0.32
CCDC57-209ENST00000483145 ITGA6P23229 1130 aa13.05□□□□□ -0.32
CCDC57-209ENST00000483145 HOXA10P31260 410 aaPredicted RBP13.05□□□□□ -0.32
CCDC57-209ENST00000483145 RFX5P48382 616 aaPredicted RBP13.05□□□□□ -0.32
CCDC57-209ENST00000483145 CCDC57Q2TAC2 916 aa13.05□□□□□ -0.32
CCDC57-209ENST00000483145 C9orf131Q5VYM1 1079 aa13.05□□□□□ -0.32
CCDC57-209ENST00000483145 TTLL6Q8N841 843 aa13.05□□□□□ -0.32
CCDC57-209ENST00000483145 NPR1P16066 1061 aa13.04□□□□□ -0.32
CCDC57-209ENST00000483145 DDX46Q7L014 1031 aaKnown RBP13.04□□□□□ -0.32
CCDC57-209ENST00000483145 RPGRQ92834 1020 aaKnown RBP13.04□□□□□ -0.32
CCDC57-209ENST00000483145 ZNF622Q969S3 477 aaKnown RBP eCLIP13.04□□□□□ -0.32
CCDC57-209ENST00000483145 RBM17Q96I25 401 aaKnown RBP13.04□□□□□ -0.32
CCDC57-209ENST00000483145 CCDC85AQ96PX6 553 aaPredicted RBP13.04□□□□□ -0.32
CCDC57-209ENST00000483145 CDC5LQ99459 802 aaKnown RBP13.04□□□□□ -0.32
CCDC57-209ENST00000483145 PPP4R2Q9NY27 417 aa13.04□□□□□ -0.32
CCDC57-209ENST00000483145 RNF181Q9P0P0 153 aa13.04□□□□□ -0.32
CCDC57-209ENST00000483145 COL4A1P02462 1669 aa13.04□□□□□ -0.32
CCDC57-209ENST00000483145 PTPN12Q05209 780 aaKnown RBP13.03□□□□□ -0.32
CCDC57-209ENST00000483145 STYK1Q6J9G0 422 aa13.03□□□□□ -0.32
CCDC57-209ENST00000483145 MASTLQ96GX5 879 aa13.03□□□□□ -0.32
CCDC57-209ENST00000483145 CRAMP1Q96RY5 1269 aa13.03□□□□□ -0.32
CCDC57-209ENST00000483145 RWDD1Q9H446 243 aaPredicted RBP13.03□□□□□ -0.32
CCDC57-209ENST00000483145 COPRSQ9NQ92 184 aa13.03□□□□□ -0.32
CCDC57-209ENST00000483145 SEC31BQ9NQW1 1179 aa13.03□□□□□ -0.32
CCDC57-209ENST00000483145 CACNA1SQ13698 1873 aa13.03□□□□□ -0.32
CCDC57-209ENST00000483145 GRAPQ13588 217 aa13.02□□□□□ -0.33
CCDC57-209ENST00000483145 TAF7LQ5H9L4 462 aa13.02□□□□□ -0.33
CCDC57-209ENST00000483145 GRAPLQ8TC17 118 aaPredicted RBP13.02□□□□□ -0.33
CCDC57-209ENST00000483145 FBXO3Q9UK99 471 aa13.02□□□□□ -0.33
CCDC57-209ENST00000483145 NOP58Q9Y2X3 529 aaKnown RBP13.02□□□□□ -0.33
CCDC57-209ENST00000483145 LRRC37AA6NMS7 1700 aa13.02□□□□□ -0.33
CCDC57-209ENST00000483145 CIAO1O76071 339 aa13.01□□□□□ -0.33
CCDC57-209ENST00000483145 IGHMBP2P38935 993 aaKnown RBP13.01□□□□□ -0.33
CCDC57-209ENST00000483145 ANKRD18AQ8IVF6 992 aa13.01□□□□□ -0.33
CCDC57-209ENST00000483145 CCDC136Q96JN2 1154 aa13.01□□□□□ -0.33
CCDC57-209ENST00000483145 DCTPP1Q9H773 170 aa13.01□□□□□ -0.33
CCDC57-209ENST00000483145 PA2G4Q9UQ80 394 aaKnown RBP13.01□□□□□ -0.33
CCDC57-209ENST00000483145 A0A1B0GUL6 1792 aa13.01□□□□□ -0.33
CCDC57-209ENST00000483145 SLX4Q8IY92 1834 aa13□□□□□ -0.33
CCDC57-209ENST00000483145 KDM2BQ8NHM5 1336 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms