RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 SP8Q8IXZ3 490 aa9.73□□□□□ -0.85
CSDE1-206ENST00000483030 MPNDQ8N594 471 aa9.73□□□□□ -0.85
CSDE1-206ENST00000483030 SUPT20HQ8NEM7 779 aa9.73□□□□□ -0.85
CSDE1-206ENST00000483030 RTFDC1Q9BY42 306 aaPredicted RBP9.73□□□□□ -0.85
CSDE1-206ENST00000483030 GLIS2Q9BZE0 524 aaPredicted RBP9.73□□□□□ -0.85
CSDE1-206ENST00000483030 TSPYL4Q9UJ04 414 aa9.73□□□□□ -0.85
CSDE1-206ENST00000483030 ABCC4O15439 1325 aa9.73□□□□□ -0.85
CSDE1-206ENST00000483030 ERBB4Q15303 1308 aa9.73□□□□□ -0.85
CSDE1-206ENST00000483030 RIC1Q4ADV7 1423 aa9.73□□□□□ -0.85
CSDE1-206ENST00000483030 AIMP1Q12904 312 aaKnown RBP9.72□□□□□ -0.85
CSDE1-206ENST00000483030 CIAPIN1Q6FI81 312 aa9.72□□□□□ -0.85
CSDE1-206ENST00000483030 COPS6Q7L5N1 327 aa9.72□□□□□ -0.85
CSDE1-206ENST00000483030 SAPCD2Q86UD0 394 aa9.72□□□□□ -0.85
CSDE1-206ENST00000483030 NECTIN2Q92692 538 aa9.72□□□□□ -0.85
CSDE1-206ENST00000483030 BCL2L13Q9BXK5 485 aa9.72□□□□□ -0.85
CSDE1-206ENST00000483030 PNNQ9H307 717 aaKnown RBP9.72□□□□□ -0.85
CSDE1-206ENST00000483030 ZNF408Q9H9D4 720 aa9.72□□□□□ -0.85
CSDE1-206ENST00000483030 PGAP2Q9UHJ9 254 aa9.72□□□□□ -0.85
CSDE1-206ENST00000483030 LTBP1Q14766 1721 aa9.72□□□□□ -0.85
CSDE1-206ENST00000483030 MAPK8IP3Q9UPT6 1336 aa9.72□□□□□ -0.85
CSDE1-206ENST00000483030 HIRAP54198 1017 aaPredicted RBP9.71□□□□□ -0.86
CSDE1-206ENST00000483030 RIPK4P57078 832 aa9.71□□□□□ -0.86
CSDE1-206ENST00000483030 KIAA2012Q0VF49 1180 aa9.71□□□□□ -0.86
CSDE1-206ENST00000483030 TNIP1Q15025 636 aa9.71□□□□□ -0.86
CSDE1-206ENST00000483030 DDX46Q7L014 1031 aaKnown RBP9.71□□□□□ -0.86
CSDE1-206ENST00000483030 NLRP10Q86W26 655 aa9.71□□□□□ -0.86
CSDE1-206ENST00000483030 ZNF428Q96B54 188 aa9.71□□□□□ -0.86
CSDE1-206ENST00000483030 TRMT112Q9UI30 125 aaKnown RBP9.71□□□□□ -0.86
CSDE1-206ENST00000483030 CNOT7Q9UIV1 285 aaKnown RBP9.71□□□□□ -0.86
CSDE1-206ENST00000483030 SHTN1A0MZ66 631 aa9.7□□□□□ -0.86
CSDE1-206ENST00000483030 MLLT1Q03111 559 aaPredicted RBP9.7□□□□□ -0.86
CSDE1-206ENST00000483030 TCIRG1Q13488 830 aa9.7□□□□□ -0.86
CSDE1-206ENST00000483030 HSP90AB3PQ58FF7 597 aa9.7□□□□□ -0.86
CSDE1-206ENST00000483030 CDC37L1Q7L3B6 337 aa9.7□□□□□ -0.86
CSDE1-206ENST00000483030 USP48Q86UV5 1035 aa9.7□□□□□ -0.86
CSDE1-206ENST00000483030 TRPM4Q8TD43 1214 aa9.7□□□□□ -0.86
CSDE1-206ENST00000483030 XAGE3Q8WTP9 111 aa9.7□□□□□ -0.86
CSDE1-206ENST00000483030 ZC3H15Q8WU90 426 aaKnown RBP9.7□□□□□ -0.86
CSDE1-206ENST00000483030 HHIPL1Q96JK4 782 aa9.7□□□□□ -0.86
CSDE1-206ENST00000483030 SPINK5Q9NQ38 1064 aaPredicted RBP9.7□□□□□ -0.86
CSDE1-206ENST00000483030 DAXXQ9UER7 740 aaPredicted RBP9.7□□□□□ -0.86
CSDE1-206ENST00000483030 YDJCA8MPS7 323 aa9.69□□□□□ -0.86
CSDE1-206ENST00000483030 H7C1D1 291 aa9.69□□□□□ -0.86
CSDE1-206ENST00000483030 CA12O43570 354 aa9.69□□□□□ -0.86
CSDE1-206ENST00000483030 RGS19P49795 217 aa9.69□□□□□ -0.86
CSDE1-206ENST00000483030 GRAPQ13588 217 aa9.69□□□□□ -0.86
CSDE1-206ENST00000483030 DLK2Q6UY11 383 aa9.69□□□□□ -0.86
CSDE1-206ENST00000483030 GRAPLQ8TC17 118 aaPredicted RBP9.69□□□□□ -0.86
CSDE1-206ENST00000483030 CFAP44Q96MT7 982 aa9.69□□□□□ -0.86
CSDE1-206ENST00000483030 ZBTB12Q9Y330 459 aaPredicted RBP9.69□□□□□ -0.86
CSDE1-206ENST00000483030 SH3TC1Q8TE82 1336 aa9.68□□□□□ -0.86
CSDE1-206ENST00000483030 CDHR2Q9BYE9 1310 aa9.68□□□□□ -0.86
CSDE1-206ENST00000483030 BRPF1P55201 1214 aaPredicted RBP9.68□□□□□ -0.86
CSDE1-206ENST00000483030 SAMD7Q7Z3H4 446 aa9.68□□□□□ -0.86
CSDE1-206ENST00000483030 MICALL2Q8IY33 904 aa9.68□□□□□ -0.86
CSDE1-206ENST00000483030 ZIC5Q96T25 663 aa9.68□□□□□ -0.86
CSDE1-206ENST00000483030 MCOLN1Q9GZU1 580 aa9.68□□□□□ -0.86
CSDE1-206ENST00000483030 BABAM1Q9NWV8 329 aa9.68□□□□□ -0.86
CSDE1-206ENST00000483030 NSFL1CQ9UNZ2 370 aaKnown RBP9.68□□□□□ -0.86
CSDE1-206ENST00000483030 RIMBP2O15034 1052 aa9.67□□□□□ -0.86
CSDE1-206ENST00000483030 SLC34A2O95436 690 aa9.67□□□□□ -0.86
CSDE1-206ENST00000483030 TMPOP42166 694 aaKnown RBP9.67□□□□□ -0.86
CSDE1-206ENST00000483030 HUNKP57058 714 aa9.67□□□□□ -0.86
CSDE1-206ENST00000483030 KRT24Q2M2I5 525 aa9.67□□□□□ -0.86
CSDE1-206ENST00000483030 WASHC4Q2M389 1173 aa9.67□□□□□ -0.86
CSDE1-206ENST00000483030 RBM26Q5T8P6 1007 aaKnown RBP9.67□□□□□ -0.86
CSDE1-206ENST00000483030 TMC4Q7Z404 712 aa9.67□□□□□ -0.86
CSDE1-206ENST00000483030 DPF2Q92785 391 aa9.67□□□□□ -0.86
CSDE1-206ENST00000483030 DBNDD1Q9H9R9 158 aa9.67□□□□□ -0.86
CSDE1-206ENST00000483030 NUP98P52948 1817 aa9.67□□□□□ -0.86
CSDE1-206ENST00000483030 LAMB4A4D0S4 1761 aa9.66□□□□□ -0.86
CSDE1-206ENST00000483030 KDM3BQ7LBC6 1761 aa9.66□□□□□ -0.86
CSDE1-206ENST00000483030 ATP5J2-PTCD1G3V325 749 aa9.66□□□□□ -0.86
CSDE1-206ENST00000483030 C6orf229H3BNL8 230 aa9.66□□□□□ -0.86
CSDE1-206ENST00000483030 PSMD14O00487 310 aa9.66□□□□□ -0.86
CSDE1-206ENST00000483030 NOGQ13253 232 aa9.66□□□□□ -0.86
CSDE1-206ENST00000483030 DGKZQ13574 1117 aa9.66□□□□□ -0.86
CSDE1-206ENST00000483030 NEUROD2Q15784 382 aa9.66□□□□□ -0.86
CSDE1-206ENST00000483030 TBC1D10BQ4KMP7 808 aaPredicted RBP9.66□□□□□ -0.86
CSDE1-206ENST00000483030 KRT26Q7Z3Y9 468 aa9.66□□□□□ -0.86
CSDE1-206ENST00000483030 CELF1Q92879 486 aaKnown RBP9.66□□□□□ -0.86
CSDE1-206ENST00000483030 FAM89AQ96GI7 184 aa9.66□□□□□ -0.86
CSDE1-206ENST00000483030 KCNQ5Q9NR82 932 aa9.66□□□□□ -0.86
CSDE1-206ENST00000483030 POLLQ9UGP5 575 aa9.66□□□□□ -0.86
CSDE1-206ENST00000483030 LAS1LQ9Y4W2 734 aaKnown RBP9.66□□□□□ -0.86
CSDE1-206ENST00000483030 CHL1O00533 1208 aa9.65□□□□□ -0.86
CSDE1-206ENST00000483030 EGFRP00533 1210 aa9.65□□□□□ -0.86
CSDE1-206ENST00000483030 GPSM2P81274 684 aa9.65□□□□□ -0.86
CSDE1-206ENST00000483030 LMOD3Q0VAK6 560 aa9.65□□□□□ -0.86
CSDE1-206ENST00000483030 SF3B3Q15393 1217 aaKnown RBP9.65□□□□□ -0.86
CSDE1-206ENST00000483030 DOK7Q18PE1 504 aa9.65□□□□□ -0.86
CSDE1-206ENST00000483030 RTL5Q5HYW3 569 aaPredicted RBP9.65□□□□□ -0.86
CSDE1-206ENST00000483030 ANKRD13DQ6ZTN6 518 aa9.65□□□□□ -0.86
CSDE1-206ENST00000483030 C2orf69Q8N8R5 385 aa9.65□□□□□ -0.86
CSDE1-206ENST00000483030 PLBD2Q8NHP8 589 aa9.65□□□□□ -0.86
CSDE1-206ENST00000483030 CHPF2Q9P2E5 772 aa9.65□□□□□ -0.86
CSDE1-206ENST00000483030 U3KPZ7 1027 aaPredicted RBP9.65□□□□□ -0.86
CSDE1-206ENST00000483030 SLC4A2P04920 1241 aa9.64□□□□□ -0.87
CSDE1-206ENST00000483030 RGMBQ6NW40 437 aa9.64□□□□□ -0.87
CSDE1-206ENST00000483030 CCDC146Q8IYE0 955 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms