RNA–Protein interactions for RNA: ENST00000482967.5

CDK5RAP1-213, Transcript of CDK5 regulatory subunit associated protein 1, human

TSL 3

Gene CDK5RAP1, Length 840 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP1-213	ENST00000482967	PGAP2	Q9UHJ9	254 aa		11.36	□□□□□ -0.59
CDK5RAP1-213	ENST00000482967	DUOX1	Q9NRD9	1551 aa		11.36	□□□□□ -0.59
CDK5RAP1-213	ENST00000482967	ERBB4	Q15303	1308 aa		11.35	□□□□□ -0.59
CDK5RAP1-213	ENST00000482967	BRPF1	P55201	1214 aa	Predicted RBP	11.35	□□□□□ -0.59
CDK5RAP1-213	ENST00000482967	KIAA2012	Q0VF49	1180 aa		11.35	□□□□□ -0.59
CDK5RAP1-213	ENST00000482967	SLC10A5	Q5PT55	438 aa		11.35	□□□□□ -0.59
CDK5RAP1-213	ENST00000482967	SUPT20H	Q8NEM7	779 aa		11.35	□□□□□ -0.59
CDK5RAP1-213	ENST00000482967	HHIPL1	Q96JK4	782 aa		11.35	□□□□□ -0.59
CDK5RAP1-213	ENST00000482967	BCL2L13	Q9BXK5	485 aa		11.35	□□□□□ -0.59
CDK5RAP1-213	ENST00000482967	VPS33B	Q9H267	617 aa		11.35	□□□□□ -0.59
CDK5RAP1-213	ENST00000482967	CA12	O43570	354 aa		11.34	□□□□□ -0.59
CDK5RAP1-213	ENST00000482967	EIF2S2	P20042	333 aa	Known RBP	11.34	□□□□□ -0.59
CDK5RAP1-213	ENST00000482967	MICALL2	Q8IY33	904 aa		11.34	□□□□□ -0.59
CDK5RAP1-213	ENST00000482967	MPND	Q8N594	471 aa		11.34	□□□□□ -0.59
CDK5RAP1-213	ENST00000482967	TMX4	Q9H1E5	349 aa	Predicted RBP	11.34	□□□□□ -0.59
CDK5RAP1-213	ENST00000482967	TSPYL4	Q9UJ04	414 aa		11.34	□□□□□ -0.59
CDK5RAP1-213	ENST00000482967	DLG5	Q8TDM6	1919 aa		11.34	□□□□□ -0.59
CDK5RAP1-213	ENST00000482967	CDHR2	Q9BYE9	1310 aa		11.34	□□□□□ -0.59
CDK5RAP1-213	ENST00000482967	EGFR	P00533	1210 aa		11.33	□□□□□ -0.6
CDK5RAP1-213	ENST00000482967	DGKZ	Q13574	1117 aa		11.33	□□□□□ -0.6
CDK5RAP1-213	ENST00000482967	USP48	Q86UV5	1035 aa		11.33	□□□□□ -0.6
CDK5RAP1-213	ENST00000482967	NLRP10	Q86W26	655 aa		11.33	□□□□□ -0.6
CDK5RAP1-213	ENST00000482967	SP8	Q8IXZ3	490 aa		11.33	□□□□□ -0.6
CDK5RAP1-213	ENST00000482967	NECTIN2	Q92692	538 aa		11.33	□□□□□ -0.6
CDK5RAP1-213	ENST00000482967	CNOT7	Q9UIV1	285 aa	Known RBP	11.33	□□□□□ -0.6
CDK5RAP1-213	ENST00000482967	ZBTB12	Q9Y330	459 aa	Predicted RBP	11.33	□□□□□ -0.6
CDK5RAP1-213	ENST00000482967	BBOX1	O75936	387 aa		11.32	□□□□□ -0.6
CDK5RAP1-213	ENST00000482967	NEFM	P07197	916 aa		11.32	□□□□□ -0.6
CDK5RAP1-213	ENST00000482967	HUNK	P57058	714 aa		11.32	□□□□□ -0.6
CDK5RAP1-213	ENST00000482967	GRAP	Q13588	217 aa		11.32	□□□□□ -0.6
CDK5RAP1-213	ENST00000482967	TNIP1	Q15025	636 aa		11.32	□□□□□ -0.6
CDK5RAP1-213	ENST00000482967	CDC37L1	Q7L3B6	337 aa		11.32	□□□□□ -0.6
CDK5RAP1-213	ENST00000482967	SAMD7	Q7Z3H4	446 aa		11.32	□□□□□ -0.6
CDK5RAP1-213	ENST00000482967	GRAPL	Q8TC17	118 aa	Predicted RBP	11.32	□□□□□ -0.6
CDK5RAP1-213	ENST00000482967	XAGE3	Q8WTP9	111 aa		11.32	□□□□□ -0.6
CDK5RAP1-213	ENST00000482967	ZC3H15	Q8WU90	426 aa	Known RBP	11.32	□□□□□ -0.6
CDK5RAP1-213	ENST00000482967	COL4A1	P02462	1669 aa		11.32	□□□□□ -0.6
CDK5RAP1-213	ENST00000482967	LAMB2	P55268	1798 aa		11.31	□□□□□ -0.6
CDK5RAP1-213	ENST00000482967	CASP8AP2	Q9UKL3	1982 aa		11.31	□□□□□ -0.6
CDK5RAP1-213	ENST00000482967	ADM5	C9JUS6	153 aa		11.31	□□□□□ -0.6
CDK5RAP1-213	ENST00000482967	PSMD14	O00487	310 aa		11.31	□□□□□ -0.6
CDK5RAP1-213	ENST00000482967	AIMP1	Q12904	312 aa	Known RBP	11.31	□□□□□ -0.6
CDK5RAP1-213	ENST00000482967	NOG	Q13253	232 aa		11.31	□□□□□ -0.6
CDK5RAP1-213	ENST00000482967	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	11.31	□□□□□ -0.6
CDK5RAP1-213	ENST00000482967	DDX46	Q7L014	1031 aa	Known RBP	11.31	□□□□□ -0.6
CDK5RAP1-213	ENST00000482967	COPS6	Q7L5N1	327 aa		11.31	□□□□□ -0.6
CDK5RAP1-213	ENST00000482967	DBNDD1	Q9H9R9	158 aa		11.31	□□□□□ -0.6
CDK5RAP1-213	ENST00000482967	TRMT112	Q9UI30	125 aa	Known RBP	11.31	□□□□□ -0.6
CDK5RAP1-213	ENST00000482967	SH3TC1	Q8TE82	1336 aa		11.31	□□□□□ -0.6
CDK5RAP1-213	ENST00000482967	MAPK8IP3	Q9UPT6	1336 aa		11.31	□□□□□ -0.6
CDK5RAP1-213	ENST00000482967	RTL9	Q8NET4	1388 aa		11.3	□□□□□ -0.6
CDK5RAP1-213	ENST00000482967	FAM155A	B1AL88	458 aa	Predicted RBP	11.3	□□□□□ -0.6
CDK5RAP1-213	ENST00000482967		H7C1D1	291 aa		11.3	□□□□□ -0.6
CDK5RAP1-213	ENST00000482967	KRT24	Q2M2I5	525 aa		11.3	□□□□□ -0.6
CDK5RAP1-213	ENST00000482967	TNRC18	O15417	2968 aa	Predicted RBP	11.3	□□□□□ -0.6
CDK5RAP1-213	ENST00000482967	LRRC37A	A6NMS7	1700 aa		11.29	□□□□□ -0.6
CDK5RAP1-213	ENST00000482967	TCIRG1	Q13488	830 aa		11.29	□□□□□ -0.6
CDK5RAP1-213	ENST00000482967	RGMB	Q6NW40	437 aa		11.29	□□□□□ -0.6
CDK5RAP1-213	ENST00000482967	KRT26	Q7Z3Y9	468 aa		11.29	□□□□□ -0.6
CDK5RAP1-213	ENST00000482967	CELF1	Q92879	486 aa	Known RBP	11.29	□□□□□ -0.6
CDK5RAP1-213	ENST00000482967	KCNQ5	Q9NR82	932 aa		11.29	□□□□□ -0.6
CDK5RAP1-213	ENST00000482967	RIMBP2	O15034	1052 aa		11.28	□□□□□ -0.6
CDK5RAP1-213	ENST00000482967	SOX10	P56693	466 aa		11.28	□□□□□ -0.6
CDK5RAP1-213	ENST00000482967	GPSM2	P81274	684 aa		11.28	□□□□□ -0.6
CDK5RAP1-213	ENST00000482967	HSP90AB3P	Q58FF7	597 aa		11.28	□□□□□ -0.6
CDK5RAP1-213	ENST00000482967	GBA2	Q9HCG7	927 aa	Predicted RBP	11.28	□□□□□ -0.6
CDK5RAP1-213	ENST00000482967	POLL	Q9UGP5	575 aa		11.28	□□□□□ -0.6
CDK5RAP1-213	ENST00000482967	ASTN2	O75129	1339 aa	Predicted RBP	11.28	□□□□□ -0.6
CDK5RAP1-213	ENST00000482967	ANKRD36C	Q5JPF3	1778 aa		11.28	□□□□□ -0.6
CDK5RAP1-213	ENST00000482967	TAF1	P21675	1872 aa		11.27	□□□□□ -0.6
CDK5RAP1-213	ENST00000482967	ECE2	O60344	883 aa		11.27	□□□□□ -0.61
CDK5RAP1-213	ENST00000482967	RIPK4	P57078	832 aa		11.27	□□□□□ -0.61
CDK5RAP1-213	ENST00000482967	KIF23	Q02241	960 aa	Predicted RBP	11.27	□□□□□ -0.61
CDK5RAP1-213	ENST00000482967	DOK7	Q18PE1	504 aa		11.27	□□□□□ -0.61
CDK5RAP1-213	ENST00000482967	WASHC4	Q2M389	1173 aa		11.27	□□□□□ -0.61
CDK5RAP1-213	ENST00000482967	RBM26	Q5T8P6	1007 aa	Known RBP	11.27	□□□□□ -0.61
CDK5RAP1-213	ENST00000482967	DPF2	Q92785	391 aa		11.27	□□□□□ -0.61
CDK5RAP1-213	ENST00000482967	CHPF2	Q9P2E5	772 aa		11.27	□□□□□ -0.61
CDK5RAP1-213	ENST00000482967	NSFL1C	Q9UNZ2	370 aa	Known RBP	11.27	□□□□□ -0.61
CDK5RAP1-213	ENST00000482967	PDE4DIP	Q5VU43	2346 aa		11.26	□□□□□ -0.61
CDK5RAP1-213	ENST00000482967	ATP5J2-PTCD1	G3V325	749 aa		11.26	□□□□□ -0.61
CDK5RAP1-213	ENST00000482967	C6orf229	H3BNL8	230 aa		11.26	□□□□□ -0.61
CDK5RAP1-213	ENST00000482967	TRPA1	O75762	1119 aa		11.26	□□□□□ -0.61
CDK5RAP1-213	ENST00000482967	SLC10A3	P09131	477 aa		11.26	□□□□□ -0.61
CDK5RAP1-213	ENST00000482967	ZNF157	P51786	506 aa	Predicted RBP	11.26	□□□□□ -0.61
CDK5RAP1-213	ENST00000482967	KIF4B	Q2VIQ3	1234 aa		11.26	□□□□□ -0.61
CDK5RAP1-213	ENST00000482967	RTL5	Q5HYW3	569 aa	Predicted RBP	11.26	□□□□□ -0.61
CDK5RAP1-213	ENST00000482967	TMC4	Q7Z404	712 aa		11.26	□□□□□ -0.61
CDK5RAP1-213	ENST00000482967	FAM89A	Q96GI7	184 aa		11.26	□□□□□ -0.61
CDK5RAP1-213	ENST00000482967	RNF186	Q9NXI6	227 aa		11.26	□□□□□ -0.61
CDK5RAP1-213	ENST00000482967	SAGE1	Q9NXZ1	904 aa		11.26	□□□□□ -0.61
CDK5RAP1-213	ENST00000482967	GGA3	Q9NZ52	723 aa		11.26	□□□□□ -0.61
CDK5RAP1-213	ENST00000482967	DDX60	Q8IY21	1712 aa	Known RBP	11.26	□□□□□ -0.61
CDK5RAP1-213	ENST00000482967	C2orf69	Q8N8R5	385 aa		11.25	□□□□□ -0.61
CDK5RAP1-213	ENST00000482967	DCPS	Q96C86	337 aa	Known RBP	11.25	□□□□□ -0.61
CDK5RAP1-213	ENST00000482967	ISCA1	Q9BUE6	129 aa		11.25	□□□□□ -0.61
CDK5RAP1-213	ENST00000482967	RPS12	P25398	132 aa	Known RBP	11.24	□□□□□ -0.61
CDK5RAP1-213	ENST00000482967	TMPO	P42166	694 aa	Known RBP	11.24	□□□□□ -0.61
CDK5RAP1-213	ENST00000482967	SF3B3	Q15393	1217 aa	Known RBP	11.24	□□□□□ -0.61
CDK5RAP1-213	ENST00000482967	TBC1D16	Q8TBP0	767 aa		11.24	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms