RNA–Protein interactions for RNA: ENST00000482745.5

HLA-DQA1-206, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 2,135 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-206ENST00000482745 METTL22Q9BUU2 404 aaPredicted RBP12.82□□□□□ -0.36
HLA-DQA1-206ENST00000482745 PI4KAP2A4QPH2 592 aa12.81□□□□□ -0.36
HLA-DQA1-206ENST00000482745 VEGFAP15692 232 aaPredicted RBP12.81□□□□□ -0.36
HLA-DQA1-206ENST00000482745 G2E3Q7L622 706 aa12.81□□□□□ -0.36
HLA-DQA1-206ENST00000482745 PI4KAP1Q8N8J0 262 aa12.81□□□□□ -0.36
HLA-DQA1-206ENST00000482745 MYH16Q9H6N6 1097 aa12.81□□□□□ -0.36
HLA-DQA1-206ENST00000482745 CACNA1FO60840 1977 aa12.81□□□□□ -0.36
HLA-DQA1-206ENST00000482745 DDNO94850 711 aaPredicted RBP12.8□□□□□ -0.36
HLA-DQA1-206ENST00000482745 HSPA6P17066 643 aa12.8□□□□□ -0.36
HLA-DQA1-206ENST00000482745 GRAPQ13588 217 aa12.8□□□□□ -0.36
HLA-DQA1-206ENST00000482745 KSR2Q6VAB6 950 aa12.8□□□□□ -0.36
HLA-DQA1-206ENST00000482745 ZBTB38Q8NAP3 1195 aaPredicted RBP12.8□□□□□ -0.36
HLA-DQA1-206ENST00000482745 CCDC191Q8NCU4 936 aa12.8□□□□□ -0.36
HLA-DQA1-206ENST00000482745 RBM46Q8TBY0 533 aaKnown RBP12.8□□□□□ -0.36
HLA-DQA1-206ENST00000482745 GRAPLQ8TC17 118 aaPredicted RBP12.8□□□□□ -0.36
HLA-DQA1-206ENST00000482745 CWC25Q9NXE8 425 aaPredicted RBP12.8□□□□□ -0.36
HLA-DQA1-206ENST00000482745 ATP6V0A2Q9Y487 856 aa12.8□□□□□ -0.36
HLA-DQA1-206ENST00000482745 CEP350Q5VT06 3117 aa12.8□□□□□ -0.36
HLA-DQA1-206ENST00000482745 GRIPAP1Q4V328 841 aa12.8□□□□□ -0.36
HLA-DQA1-206ENST00000482745 JARID2Q92833 1246 aaPredicted RBP12.8□□□□□ -0.36
HLA-DQA1-206ENST00000482745 ZNF541Q9H0D2 1346 aa12.79□□□□□ -0.36
HLA-DQA1-206ENST00000482745 VAMP4O75379 141 aa12.79□□□□□ -0.36
HLA-DQA1-206ENST00000482745 BBOX1O75936 387 aa12.79□□□□□ -0.36
HLA-DQA1-206ENST00000482745 NEXNQ0ZGT2 675 aa12.79□□□□□ -0.36
HLA-DQA1-206ENST00000482745 FLIIQ13045 1269 aa12.79□□□□□ -0.36
HLA-DQA1-206ENST00000482745 JDP2Q8WYK2 163 aa12.79□□□□□ -0.36
HLA-DQA1-206ENST00000482745 COL4A5P29400 1685 aa12.79□□□□□ -0.36
HLA-DQA1-206ENST00000482745 FKBP5Q13451 457 aaPredicted RBP12.79□□□□□ -0.36
HLA-DQA1-206ENST00000482745 LARGE2Q8N3Y3 721 aa12.79□□□□□ -0.36
HLA-DQA1-206ENST00000482745 LRRC37AA6NMS7 1700 aa12.79□□□□□ -0.36
HLA-DQA1-206ENST00000482745 COL4A1P02462 1669 aa12.78□□□□□ -0.36
HLA-DQA1-206ENST00000482745 POTECB2RU33 542 aa12.78□□□□□ -0.36
HLA-DQA1-206ENST00000482745 PCCAP05165 728 aaPredicted RBP12.78□□□□□ -0.36
HLA-DQA1-206ENST00000482745 IGKV5-2P06315 115 aa12.78□□□□□ -0.36
HLA-DQA1-206ENST00000482745 SF3B3Q15393 1217 aaKnown RBP12.78□□□□□ -0.36
HLA-DQA1-206ENST00000482745 ZNF521Q96K83 1311 aa12.78□□□□□ -0.36
HLA-DQA1-206ENST00000482745 HSP90B1P14625 803 aaKnown RBP12.77□□□□□ -0.36
HLA-DQA1-206ENST00000482745 CWF19L2Q2TBE0 894 aaKnown RBP12.77□□□□□ -0.36
HLA-DQA1-206ENST00000482745 DPP8Q6V1X1 898 aaPredicted RBP12.77□□□□□ -0.36
HLA-DQA1-206ENST00000482745 SP8Q8IXZ3 490 aa12.77□□□□□ -0.36
HLA-DQA1-206ENST00000482745 CELF1Q92879 486 aaKnown RBP12.77□□□□□ -0.36
HLA-DQA1-206ENST00000482745 ZBTB47Q9UFB7 747 aaPredicted RBP12.77□□□□□ -0.36
HLA-DQA1-206ENST00000482745 MYH3P11055 1940 aa12.77□□□□□ -0.37
HLA-DQA1-206ENST00000482745 PPIP5K2O43314 1243 aa12.77□□□□□ -0.37
HLA-DQA1-206ENST00000482745 CCDC85AQ96PX6 553 aaPredicted RBP12.77□□□□□ -0.37
HLA-DQA1-206ENST00000482745 SCN4AP35499 1836 aa12.76□□□□□ -0.37
HLA-DQA1-206ENST00000482745 FZD9O00144 591 aa12.76□□□□□ -0.37
HLA-DQA1-206ENST00000482745 FSTL1Q12841 308 aa12.76□□□□□ -0.37
HLA-DQA1-206ENST00000482745 AOC3Q16853 763 aa12.76□□□□□ -0.37
HLA-DQA1-206ENST00000482745 TMC4Q7Z404 712 aa12.76□□□□□ -0.37
HLA-DQA1-206ENST00000482745 MPNDQ8N594 471 aa12.76□□□□□ -0.37
HLA-DQA1-206ENST00000482745 SMC1BQ8NDV3 1235 aa12.76□□□□□ -0.37
HLA-DQA1-206ENST00000482745 NEURL1BA8MQ27 555 aa12.76□□□□□ -0.37
HLA-DQA1-206ENST00000482745 PDE8AO60658 829 aa12.76□□□□□ -0.37
HLA-DQA1-206ENST00000482745 EIF6P56537 245 aaKnown RBP12.76□□□□□ -0.37
HLA-DQA1-206ENST00000482745 CCDC152Q4G0S7 254 aa12.76□□□□□ -0.37
HLA-DQA1-206ENST00000482745 NIM1KQ8IY84 436 aa12.76□□□□□ -0.37
HLA-DQA1-206ENST00000482745 SUPT20HQ8NEM7 779 aa12.76□□□□□ -0.37
HLA-DQA1-206ENST00000482745 DNAAF4Q8WXU2 420 aa12.76□□□□□ -0.37
HLA-DQA1-206ENST00000482745 DUOX1Q9NRD9 1551 aa12.75□□□□□ -0.37
HLA-DQA1-206ENST00000482745 IQCA1LA6NCM1 817 aa12.75□□□□□ -0.37
HLA-DQA1-206ENST00000482745 SEC31BQ9NQW1 1179 aa12.75□□□□□ -0.37
HLA-DQA1-206ENST00000482745 GJA3Q9Y6H8 435 aa12.75□□□□□ -0.37
HLA-DQA1-206ENST00000482745 CDHR2Q9BYE9 1310 aa12.75□□□□□ -0.37
HLA-DQA1-206ENST00000482745 L3MBTL3Q96JM7 780 aaPredicted RBP12.74□□□□□ -0.37
HLA-DQA1-206ENST00000482745 RTFDC1Q9BY42 306 aaPredicted RBP12.74□□□□□ -0.37
HLA-DQA1-206ENST00000482745 SPEF2Q9C093 1822 aa12.74□□□□□ -0.37
HLA-DQA1-206ENST00000482745 APLP1P51693 650 aa12.74□□□□□ -0.37
HLA-DQA1-206ENST00000482745 UBE3BQ7Z3V4 1068 aa12.74□□□□□ -0.37
HLA-DQA1-206ENST00000482745 GPC2Q8N158 579 aa12.74□□□□□ -0.37
HLA-DQA1-206ENST00000482745 NSFL1CQ9UNZ2 370 aaKnown RBP12.74□□□□□ -0.37
HLA-DQA1-206ENST00000482745 F6X3S4 739 aa12.73□□□□□ -0.37
HLA-DQA1-206ENST00000482745 CTSWP56202 376 aa12.73□□□□□ -0.37
HLA-DQA1-206ENST00000482745 RPS8P62241 208 aaKnown RBP12.73□□□□□ -0.37
HLA-DQA1-206ENST00000482745 E9PSI1 815 aa12.73□□□□□ -0.37
HLA-DQA1-206ENST00000482745 POTEIP0CG38 1075 aa12.73□□□□□ -0.37
HLA-DQA1-206ENST00000482745 POTEJP0CG39 1038 aa12.73□□□□□ -0.37
HLA-DQA1-206ENST00000482745 GCKRQ14397 625 aa12.73□□□□□ -0.37
HLA-DQA1-206ENST00000482745 LINS1Q8NG48 757 aa12.73□□□□□ -0.37
HLA-DQA1-206ENST00000482745 VPS33BQ9H267 617 aa12.73□□□□□ -0.37
HLA-DQA1-206ENST00000482745 HACL1Q9UJ83 578 aa12.73□□□□□ -0.37
HLA-DQA1-206ENST00000482745 LTBP1Q14766 1721 aa12.72□□□□□ -0.37
HLA-DQA1-206ENST00000482745 GPSM2P81274 684 aa12.72□□□□□ -0.37
HLA-DQA1-206ENST00000482745 KIAA2012Q0VF49 1180 aa12.72□□□□□ -0.37
HLA-DQA1-206ENST00000482745 EAPPQ56P03 285 aaPredicted RBP12.72□□□□□ -0.37
HLA-DQA1-206ENST00000482745 UBE2Q2Q8WVN8 375 aa12.72□□□□□ -0.37
HLA-DQA1-206ENST00000482745 TAF1DQ9H5J8 278 aaPredicted RBP12.72□□□□□ -0.37
HLA-DQA1-206ENST00000482745 C6orf229H3BNL8 230 aa12.71□□□□□ -0.37
HLA-DQA1-206ENST00000482745 H7C1W4 665 aa12.71□□□□□ -0.38
HLA-DQA1-206ENST00000482745 EPHX2P34913 555 aa12.71□□□□□ -0.38
HLA-DQA1-206ENST00000482745 HTRA3P83110 453 aa12.71□□□□□ -0.38
HLA-DQA1-206ENST00000482745 ANKRD18AQ8IVF6 992 aa12.71□□□□□ -0.38
HLA-DQA1-206ENST00000482745 IL27Q8NEV9 243 aa12.71□□□□□ -0.38
HLA-DQA1-206ENST00000482745 ZNRF3Q9ULT6 936 aa12.71□□□□□ -0.38
HLA-DQA1-206ENST00000482745 RIMBP2O15034 1052 aa12.7□□□□□ -0.38
HLA-DQA1-206ENST00000482745 LMOD1P29536 600 aaPredicted RBP12.7□□□□□ -0.38
HLA-DQA1-206ENST00000482745 SLFN5Q08AF3 891 aa12.7□□□□□ -0.38
HLA-DQA1-206ENST00000482745 WASHC4Q2M389 1173 aa12.7□□□□□ -0.38
HLA-DQA1-206ENST00000482745 CHADLQ6NUI6 762 aa12.7□□□□□ -0.38
HLA-DQA1-206ENST00000482745 TTLL11Q8NHH1 800 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms