RNA–Protein interactions for RNA: ENST00000482733.1

HMGN1-214, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 701 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-214ENST00000482733 PLA2G12BQ9BX93 195 aa21■□□□□ 0.95
HMGN1-214ENST00000482733 SLX4Q8IY92 1834 aa20.99■□□□□ 0.95
HMGN1-214ENST00000482733 GRM8O00222 908 aa20.99■□□□□ 0.95
HMGN1-214ENST00000482733 IPO8O15397 1037 aaKnown RBP20.99■□□□□ 0.95
HMGN1-214ENST00000482733 LMNB1P20700 586 aa20.99■□□□□ 0.95
HMGN1-214ENST00000482733 CASP7P55210 303 aa20.99■□□□□ 0.95
HMGN1-214ENST00000482733 CTSWP56202 376 aa20.99■□□□□ 0.95
HMGN1-214ENST00000482733 C9orf131Q5VYM1 1079 aa20.99■□□□□ 0.95
HMGN1-214ENST00000482733 C9orf78Q9NZ63 289 aaPredicted RBP20.99■□□□□ 0.95
HMGN1-214ENST00000482733 ATP6V0A2Q9Y487 856 aa20.99■□□□□ 0.95
HMGN1-214ENST00000482733 CHD4Q14839 1912 aa20.99■□□□□ 0.95
HMGN1-214ENST00000482733 DDX60Q8IY21 1712 aaKnown RBP20.98■□□□□ 0.95
HMGN1-214ENST00000482733 RASSF7Q02833 373 aa20.98■□□□□ 0.95
HMGN1-214ENST00000482733 FKBP4Q02790 459 aaKnown RBP eCLIP20.97■□□□□ 0.95
HMGN1-214ENST00000482733 SP8Q8IXZ3 490 aa20.97■□□□□ 0.95
HMGN1-214ENST00000482733 TTLL11Q8NHH1 800 aa20.97■□□□□ 0.95
HMGN1-214ENST00000482733 RNF181Q9P0P0 153 aa20.97■□□□□ 0.95
HMGN1-214ENST00000482733 LAMB2P55268 1798 aa20.97■□□□□ 0.95
HMGN1-214ENST00000482733 CCT4P50991 539 aaKnown RBP20.96■□□□□ 0.95
HMGN1-214ENST00000482733 PSMD1Q99460 953 aa20.96■□□□□ 0.95
HMGN1-214ENST00000482733 BCAR3O75815 825 aa20.95■□□□□ 0.94
HMGN1-214ENST00000482733 RPS8P62241 208 aaKnown RBP20.95■□□□□ 0.94
HMGN1-214ENST00000482733 OLFM4Q6UX06 510 aa20.95■□□□□ 0.94
HMGN1-214ENST00000482733 CELF1Q92879 486 aaKnown RBP20.95■□□□□ 0.94
HMGN1-214ENST00000482733 ZC3H4Q9UPT8 1303 aaKnown RBP20.95■□□□□ 0.94
HMGN1-214ENST00000482733 RTL9Q8NET4 1388 aa20.95■□□□□ 0.94
HMGN1-214ENST00000482733 CDC5LQ99459 802 aaKnown RBP20.94■□□□□ 0.94
HMGN1-214ENST00000482733 UTYO14607 1347 aa20.94■□□□□ 0.94
HMGN1-214ENST00000482733 CSF1RP07333 972 aa20.93■□□□□ 0.94
HMGN1-214ENST00000482733 CCDC85AQ96PX6 553 aaPredicted RBP20.93■□□□□ 0.94
HMGN1-214ENST00000482733 SEC31BQ9NQW1 1179 aa20.93■□□□□ 0.94
HMGN1-214ENST00000482733 SNED1Q8TER0 1413 aa20.93■□□□□ 0.94
HMGN1-214ENST00000482733 PRELPP51888 382 aa20.92■□□□□ 0.94
HMGN1-214ENST00000482733 ATF7IPQ6VMQ6 1270 aa20.92■□□□□ 0.94
HMGN1-214ENST00000482733 ANKRD18AQ8IVF6 992 aa20.92■□□□□ 0.94
HMGN1-214ENST00000482733 FRAT1Q92837 279 aaPredicted RBP20.92■□□□□ 0.94
HMGN1-214ENST00000482733 GREM2Q9H772 168 aa20.92■□□□□ 0.94
HMGN1-214ENST00000482733 CACNA1SQ13698 1873 aa20.91■□□□□ 0.94
HMGN1-214ENST00000482733 ZKSCAN2Q63HK3 967 aa20.91■□□□□ 0.94
HMGN1-214ENST00000482733 MPNDQ8N594 471 aa20.91■□□□□ 0.94
HMGN1-214ENST00000482733 ZNF784Q8NCA9 323 aaPredicted RBP20.91■□□□□ 0.94
HMGN1-214ENST00000482733 SUPT20HQ8NEM7 779 aa20.91■□□□□ 0.94
HMGN1-214ENST00000482733 FER1L6Q2WGJ9 1857 aa20.9■□□□□ 0.94
HMGN1-214ENST00000482733 NBPF7P0C2Y1 421 aaPredicted RBP20.9■□□□□ 0.94
HMGN1-214ENST00000482733 FOXO4P98177 505 aa20.9■□□□□ 0.94
HMGN1-214ENST00000482733 DPP8Q6V1X1 898 aaPredicted RBP20.9■□□□□ 0.94
HMGN1-214ENST00000482733 VPS33BQ9H267 617 aa20.9■□□□□ 0.94
HMGN1-214ENST00000482733 ZNF277Q9NRM2 450 aaPredicted RBP20.9■□□□□ 0.94
HMGN1-214ENST00000482733 TRIM27P14373 513 aa20.89■□□□□ 0.93
HMGN1-214ENST00000482733 IARSP41252 1262 aaKnown RBP20.89■□□□□ 0.93
HMGN1-214ENST00000482733 INTS3Q68E01 1043 aaKnown RBP20.89■□□□□ 0.93
HMGN1-214ENST00000482733 RTFDC1Q9BY42 306 aaPredicted RBP20.89■□□□□ 0.93
HMGN1-214ENST00000482733 USP44Q9H0E7 712 aa20.89■□□□□ 0.93
HMGN1-214ENST00000482733 HDAC5Q9UQL6 1122 aa20.89■□□□□ 0.93
HMGN1-214ENST00000482733 ITGA6P23229 1130 aa20.88■□□□□ 0.93
HMGN1-214ENST00000482733 IGHMBP2P38935 993 aaKnown RBP20.88■□□□□ 0.93
HMGN1-214ENST00000482733 FAM161AQ3B820 660 aa20.88■□□□□ 0.93
HMGN1-214ENST00000482733 SUCLG2Q96I99 432 aa20.88■□□□□ 0.93
HMGN1-214ENST00000482733 ANKRD18BA2A2Z9 1011 aa20.87■□□□□ 0.93
HMGN1-214ENST00000482733 IFIT5Q13325 482 aaKnown RBP20.87■□□□□ 0.93
HMGN1-214ENST00000482733 LMBR1LQ6UX01 489 aa20.87■□□□□ 0.93
HMGN1-214ENST00000482733 BSDC1Q9NW68 430 aaPredicted RBP20.87■□□□□ 0.93
HMGN1-214ENST00000482733 NSFL1CQ9UNZ2 370 aaKnown RBP20.87■□□□□ 0.93
HMGN1-214ENST00000482733 CHMP3Q9Y3E7 222 aa20.87■□□□□ 0.93
HMGN1-214ENST00000482733 EPHA10Q5JZY3 1008 aa20.86■□□□□ 0.93
HMGN1-214ENST00000482733 SLC51AQ86UW1 340 aa20.86■□□□□ 0.93
HMGN1-214ENST00000482733 CCDC57Q2TAC2 916 aa20.85■□□□□ 0.93
HMGN1-214ENST00000482733 JDP2Q8WYK2 163 aa20.85■□□□□ 0.93
HMGN1-214ENST00000482733 KAZALD1Q96I82 304 aa20.85■□□□□ 0.93
HMGN1-214ENST00000482733 MPHOSPH8Q99549 860 aa20.85■□□□□ 0.93
HMGN1-214ENST00000482733 GPBP1L1Q9HC44 474 aaPredicted RBP20.85■□□□□ 0.93
HMGN1-214ENST00000482733 PODXL2Q9NZ53 605 aa20.85■□□□□ 0.93
HMGN1-214ENST00000482733 KDM2BQ8NHM5 1336 aa20.84■□□□□ 0.93
HMGN1-214ENST00000482733 SBF1O95248 1867 aa20.84■□□□□ 0.93
HMGN1-214ENST00000482733 UBTFL1P0CB47 393 aaPredicted RBP20.84■□□□□ 0.93
HMGN1-214ENST00000482733 GPSM2P81274 684 aa20.84■□□□□ 0.93
HMGN1-214ENST00000482733 RABL6Q3YEC7 729 aaPredicted RBP20.84■□□□□ 0.93
HMGN1-214ENST00000482733 DPY19L2Q6NUT2 758 aa20.84■□□□□ 0.93
HMGN1-214ENST00000482733 LARGE2Q8N3Y3 721 aa20.84■□□□□ 0.93
HMGN1-214ENST00000482733 YTHDC1Q96MU7 727 aaKnown RBP20.84■□□□□ 0.93
HMGN1-214ENST00000482733 ANKIB1Q9P2G1 1089 aa20.84■□□□□ 0.93
HMGN1-214ENST00000482733 RCAN3Q9UKA8 241 aa20.84■□□□□ 0.93
HMGN1-214ENST00000482733 PPIP5K2O43314 1243 aa20.83■□□□□ 0.93
HMGN1-214ENST00000482733 FTSJ3Q8IY81 847 aaKnown RBP20.83■□□□□ 0.93
HMGN1-214ENST00000482733 CLUAP1Q96AJ1 413 aa20.83■□□□□ 0.93
HMGN1-214ENST00000482733 EYA3Q99504 573 aa20.83■□□□□ 0.93
HMGN1-214ENST00000482733 BICC1Q9H694 974 aaKnown RBP20.83■□□□□ 0.93
HMGN1-214ENST00000482733 MYH3P11055 1940 aa20.82■□□□□ 0.92
HMGN1-214ENST00000482733 XDHP47989 1333 aa20.82■□□□□ 0.92
HMGN1-214ENST00000482733 LRRC37AA6NMS7 1700 aa20.82■□□□□ 0.92
HMGN1-214ENST00000482733 GLTPD2A6NH11 291 aa20.82■□□□□ 0.92
HMGN1-214ENST00000482733 GNAI3P08754 354 aa20.82■□□□□ 0.92
HMGN1-214ENST00000482733 MS4A1P11836 297 aa20.82■□□□□ 0.92
HMGN1-214ENST00000482733 KIAA2012Q0VF49 1180 aa20.82■□□□□ 0.92
HMGN1-214ENST00000482733 TAF7LQ5H9L4 462 aa20.82■□□□□ 0.92
HMGN1-214ENST00000482733 ZNF526Q8TF50 670 aaPredicted RBP20.82■□□□□ 0.92
HMGN1-214ENST00000482733 GGA1Q9UJY5 639 aa20.82■□□□□ 0.92
HMGN1-214ENST00000482733 MINPP1Q9UNW1 487 aa20.82■□□□□ 0.92
HMGN1-214ENST00000482733 COL4A1P02462 1669 aa20.82■□□□□ 0.92
HMGN1-214ENST00000482733 C6orf229H3BNL8 230 aa20.81■□□□□ 0.92
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