RNA–Protein interactions for RNA: ENST00000482722.5

COL9A2-207, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 2,887 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-207ENST00000482722 PDE4CQ08493 712 aa16.89■□□□□ 0.29
COL9A2-207ENST00000482722 ANO6Q4KMQ2 910 aa16.89■□□□□ 0.29
COL9A2-207ENST00000482722 TRIM5Q9C035 493 aa16.89■□□□□ 0.29
COL9A2-207ENST00000482722 SLAIN2Q9P270 581 aa16.89■□□□□ 0.29
COL9A2-207ENST00000482722 GIGYF1O75420 1035 aaPredicted RBP16.89■□□□□ 0.29
COL9A2-207ENST00000482722 KCNJ4P48050 445 aa16.89■□□□□ 0.29
COL9A2-207ENST00000482722 ZNF75DP51815 510 aa16.89■□□□□ 0.29
COL9A2-207ENST00000482722 ST3GAL1Q11201 340 aa16.89■□□□□ 0.29
COL9A2-207ENST00000482722 ME3Q16798 604 aa16.89■□□□□ 0.29
COL9A2-207ENST00000482722 AMOTQ4VCS5 1084 aa16.89■□□□□ 0.29
COL9A2-207ENST00000482722 TTC6Q86TZ1 520 aa16.89■□□□□ 0.29
COL9A2-207ENST00000482722 CYP27B1O15528 508 aa16.88■□□□□ 0.29
COL9A2-207ENST00000482722 IFIT2P09913 472 aaKnown RBP16.88■□□□□ 0.29
COL9A2-207ENST00000482722 CACTINQ8WUQ7 758 aaKnown RBP16.88■□□□□ 0.29
COL9A2-207ENST00000482722 PRDM11Q9NQV5 511 aa16.88■□□□□ 0.29
COL9A2-207ENST00000482722 TFIP11Q9UBB9 837 aaKnown RBP16.88■□□□□ 0.29
COL9A2-207ENST00000482722 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.88■□□□□ 0.29
COL9A2-207ENST00000482722 PLA2G4DQ86XP0 818 aa16.88■□□□□ 0.29
COL9A2-207ENST00000482722 KRT222Q8N1A0 295 aa16.88■□□□□ 0.29
COL9A2-207ENST00000482722 PXDNLA1KZ92 1463 aa16.88■□□□□ 0.29
COL9A2-207ENST00000482722 ADCY9O60503 1353 aa16.88■□□□□ 0.29
COL9A2-207ENST00000482722 KMT5BQ4FZB7 885 aa16.87■□□□□ 0.29
COL9A2-207ENST00000482722 CDC37L1Q7L3B6 337 aa16.87■□□□□ 0.29
COL9A2-207ENST00000482722 SIL1Q9H173 461 aa16.87■□□□□ 0.29
COL9A2-207ENST00000482722 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.87■□□□□ 0.294e-7■■□□□ 14
COL9A2-207ENST00000482722 V9GYY5 206 aaPredicted RBP16.87■□□□□ 0.29
COL9A2-207ENST00000482722 TRPM3Q9HCF6 1732 aaPredicted RBP16.87■□□□□ 0.29
COL9A2-207ENST00000482722 LARP1BQ659C4 914 aaKnown RBP16.87■□□□□ 0.29
COL9A2-207ENST00000482722 CEP135Q66GS9 1140 aa16.87■□□□□ 0.29
COL9A2-207ENST00000482722 AACSQ86V21 672 aa16.87■□□□□ 0.29
COL9A2-207ENST00000482722 SPATA31A3Q5VYP0 1347 aa16.87■□□□□ 0.29
COL9A2-207ENST00000482722 GLRX3O76003 335 aaKnown RBP16.87■□□□□ 0.29
COL9A2-207ENST00000482722 TATP17735 454 aaPredicted RBP16.87■□□□□ 0.29
COL9A2-207ENST00000482722 IRX5P78411 483 aaPredicted RBP16.87■□□□□ 0.29
COL9A2-207ENST00000482722 HSP90AB4PQ58FF6 505 aa16.87■□□□□ 0.29
COL9A2-207ENST00000482722 DBF4Q9UBU7 674 aaPredicted RBP16.87■□□□□ 0.29
COL9A2-207ENST00000482722 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.87■□□□□ 0.29
COL9A2-207ENST00000482722 CCDC144BQ3MJ40 725 aa16.86■□□□□ 0.29
COL9A2-207ENST00000482722 CCDC144CPQ8IYA2 1237 aa16.86■□□□□ 0.29
COL9A2-207ENST00000482722 USP16Q9Y5T5 823 aa16.86■□□□□ 0.29
COL9A2-207ENST00000482722 TOM1L2Q6ZVM7 507 aa16.86■□□□□ 0.29
COL9A2-207ENST00000482722 ZNF397Q8NF99 534 aaPredicted RBP16.86■□□□□ 0.29
COL9A2-207ENST00000482722 ZNF496Q96IT1 587 aaPredicted RBP16.86■□□□□ 0.29
COL9A2-207ENST00000482722 CCDC8Q9H0W5 538 aaPredicted RBP16.86■□□□□ 0.29
COL9A2-207ENST00000482722 TNMDQ9H2S6 317 aa16.86■□□□□ 0.29
COL9A2-207ENST00000482722 ZNF215Q9UL58 517 aaPredicted RBP16.86■□□□□ 0.29
COL9A2-207ENST00000482722 CYP46A1Q9Y6A2 500 aa16.86■□□□□ 0.29
COL9A2-207ENST00000482722 DACT1Q9NYF0 836 aa16.85■□□□□ 0.29
COL9A2-207ENST00000482722 TPCN1Q9ULQ1 816 aa16.85■□□□□ 0.29
COL9A2-207ENST00000482722 NAP1L2Q9ULW6 460 aaPredicted RBP16.85■□□□□ 0.29
COL9A2-207ENST00000482722 MEGF6O75095 1541 aa16.85■□□□□ 0.29
COL9A2-207ENST00000482722 PHKG2P15735 406 aa16.85■□□□□ 0.29
COL9A2-207ENST00000482722 ECHDC1Q9NTX5 307 aa16.85■□□□□ 0.29
COL9A2-207ENST00000482722 CLIP2Q9UDT6 1046 aa16.85■□□□□ 0.29
COL9A2-207ENST00000482722 CACNA1FO60840 1977 aa16.85■□□□□ 0.29
COL9A2-207ENST00000482722 CCDC66A2RUB6 948 aa16.84■□□□□ 0.29
COL9A2-207ENST00000482722 ERICH4A6NGS2 130 aa16.84■□□□□ 0.29
COL9A2-207ENST00000482722 USP27XA6NNY8 438 aa16.84■□□□□ 0.29
COL9A2-207ENST00000482722 KRT85P78386 507 aa16.84■□□□□ 0.29
COL9A2-207ENST00000482722 ZNF790Q6PG37 636 aa16.84■□□□□ 0.29
COL9A2-207ENST00000482722 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.84■□□□□ 0.29
COL9A2-207ENST00000482722 KLHDC4Q8TBB5 520 aa16.84■□□□□ 0.29
COL9A2-207ENST00000482722 ST7Q9NRC1 585 aa16.84■□□□□ 0.29
COL9A2-207ENST00000482722 SLIT3O75094 1523 aa16.84■□□□□ 0.29
COL9A2-207ENST00000482722 CDK11BP21127 795 aaKnown RBP16.83■□□□□ 0.29
COL9A2-207ENST00000482722 STK3Q13188 491 aa16.83■□□□□ 0.29
COL9A2-207ENST00000482722 VPS53Q5VIR6 699 aa16.83■□□□□ 0.29
COL9A2-207ENST00000482722 TDRD7Q8NHU6 1098 aaKnown RBP16.83■□□□□ 0.29
COL9A2-207ENST00000482722 RUFY2Q8WXA3 655 aa16.83■□□□□ 0.29
COL9A2-207ENST00000482722 GOLGA6L4A6NEF3 574 aa16.83■□□□□ 0.28
COL9A2-207ENST00000482722 FBXO38Q6PIJ6 1188 aa16.83■□□□□ 0.28
COL9A2-207ENST00000482722 GPATCH3Q96I76 525 aa16.83■□□□□ 0.28
COL9A2-207ENST00000482722 FAM227BQ96M60 508 aa16.83■□□□□ 0.28
COL9A2-207ENST00000482722 USP54Q70EL1 1684 aa16.83■□□□□ 0.28
COL9A2-207ENST00000482722 ARID5BQ14865 1188 aa16.83■□□□□ 0.28
COL9A2-207ENST00000482722 DNAJC25Q9H1X3 360 aa16.82■□□□□ 0.28
COL9A2-207ENST00000482722 ZSWIM6Q9HCJ5 1215 aa16.82■□□□□ 0.28
COL9A2-207ENST00000482722 FAM53CQ9NYF3 392 aa16.82■□□□□ 0.28
COL9A2-207ENST00000482722 TAF6LQ9Y6J9 622 aa16.82■□□□□ 0.28
COL9A2-207ENST00000482722 TTC41PQ6P2S7 1318 aa16.82■□□□□ 0.28
COL9A2-207ENST00000482722 HOXB7P09629 217 aa16.82■□□□□ 0.28
COL9A2-207ENST00000482722 RBM6P78332 1123 aaKnown RBP16.82■□□□□ 0.28
COL9A2-207ENST00000482722 ELF2Q15723 593 aa16.82■□□□□ 0.28
COL9A2-207ENST00000482722 KSR2Q6VAB6 950 aa16.82■□□□□ 0.28
COL9A2-207ENST00000482722 TIGD1Q96MW7 591 aa16.82■□□□□ 0.28
COL9A2-207ENST00000482722 BOLA2Q9H3K6 86 aa16.82■□□□□ 0.28
COL9A2-207ENST00000482722 PTCD1O75127 700 aaKnown RBP16.81■□□□□ 0.28
COL9A2-207ENST00000482722 ZNF165P49910 485 aa16.81■□□□□ 0.28
COL9A2-207ENST00000482722 SUCLG2Q96I99 432 aa16.81■□□□□ 0.28
COL9A2-207ENST00000482722 BICC1Q9H694 974 aaKnown RBP16.81■□□□□ 0.28
COL9A2-207ENST00000482722 SLC52A2Q9HAB3 445 aa16.81■□□□□ 0.28
COL9A2-207ENST00000482722 TLR7Q9NYK1 1049 aaKnown RBP16.81■□□□□ 0.28
COL9A2-207ENST00000482722 LARP1Q6PKG0 1096 aaKnown RBP16.81■□□□□ 0.28
COL9A2-207ENST00000482722 RBM8AQ9Y5S9 174 aaKnown RBP16.81■□□□□ 0.28
COL9A2-207ENST00000482722 ELP1O95163 1332 aa16.81■□□□□ 0.28
COL9A2-207ENST00000482722 G3BP1Q13283 466 aaKnown RBP eCLIP16.8■□□□□ 0.28
COL9A2-207ENST00000482722 SH2B1Q9NRF2 756 aaPredicted RBP16.8■□□□□ 0.28
COL9A2-207ENST00000482722 CCDC9Q9Y3X0 531 aaKnown RBP16.8■□□□□ 0.28
COL9A2-207ENST00000482722 KDM6AO15550 1401 aaPredicted RBP16.8■□□□□ 0.28
COL9A2-207ENST00000482722 ZKSCAN1P17029 563 aaPredicted RBP16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms