RNA–Protein interactions for RNA: ENST00000482687.5

APTX-225, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-225ENST00000482687 MCM4P33991 863 aa12.68□□□□□ -0.38
APTX-225ENST00000482687 FGD1P98174 961 aa12.68□□□□□ -0.38
APTX-225ENST00000482687 NIP7Q9Y221 180 aaKnown RBP eCLIP12.68□□□□□ -0.38
APTX-225ENST00000482687 SALL3Q9BXA9 1300 aa12.68□□□□□ -0.38
APTX-225ENST00000482687 MYH3P11055 1940 aa12.68□□□□□ -0.38
APTX-225ENST00000482687 IRS4O14654 1257 aaPredicted RBP12.68□□□□□ -0.38
APTX-225ENST00000482687 RPS6KA4O75676 772 aa12.68□□□□□ -0.38
APTX-225ENST00000482687 MAP4K4O95819 1239 aaPredicted RBP12.68□□□□□ -0.38
APTX-225ENST00000482687 RC3H1Q5TC82 1133 aaKnown RBP12.68□□□□□ -0.38
APTX-225ENST00000482687 USPL1Q5W0Q7 1092 aa12.68□□□□□ -0.38
APTX-225ENST00000482687 TUBGCP6Q96RT7 1819 aa12.67□□□□□ -0.38
APTX-225ENST00000482687 AACSQ86V21 672 aa12.67□□□□□ -0.38
APTX-225ENST00000482687 CCDC8Q9H0W5 538 aaPredicted RBP12.67□□□□□ -0.38
APTX-225ENST00000482687 COPRSQ9NQ92 184 aa12.67□□□□□ -0.38
APTX-225ENST00000482687 HCLS1P14317 486 aaPredicted RBP12.66□□□□□ -0.38
APTX-225ENST00000482687 SDSP20132 328 aa12.66□□□□□ -0.38
APTX-225ENST00000482687 MFAP1P55081 439 aaKnown RBP12.66□□□□□ -0.38
APTX-225ENST00000482687 TFCP2Q12800 502 aa12.66□□□□□ -0.38
APTX-225ENST00000482687 ERC1Q8IUD2 1116 aa12.66□□□□□ -0.38
APTX-225ENST00000482687 SMAP1Q8IYB5 467 aaPredicted RBP12.66□□□□□ -0.38
APTX-225ENST00000482687 AK7Q96M32 723 aa12.66□□□□□ -0.38
APTX-225ENST00000482687 GRPEL1Q9HAV7 217 aa12.66□□□□□ -0.38
APTX-225ENST00000482687 RTCBQ9Y3I0 505 aaKnown RBP12.66□□□□□ -0.38
APTX-225ENST00000482687 SCN7AQ01118 1682 aa12.66□□□□□ -0.38
APTX-225ENST00000482687 C4AP0C0L4 1744 aa12.66□□□□□ -0.38
APTX-225ENST00000482687 DDX60Q8IY21 1712 aaKnown RBP12.66□□□□□ -0.38
APTX-225ENST00000482687 LRRC24Q50LG9 513 aa12.65□□□□□ -0.38
APTX-225ENST00000482687 CLASRPQ8N2M8 674 aaKnown RBP12.65□□□□□ -0.38
APTX-225ENST00000482687 ARHGEF1Q92888 912 aaKnown RBP12.65□□□□□ -0.38
APTX-225ENST00000482687 UTP14AQ9BVJ6 771 aaKnown RBP12.65□□□□□ -0.38
APTX-225ENST00000482687 PUS3Q9BZE2 481 aaKnown RBP12.65□□□□□ -0.38
APTX-225ENST00000482687 BCL2L12Q9HB09 334 aa12.65□□□□□ -0.38
APTX-225ENST00000482687 TLR7Q9NYK1 1049 aaKnown RBP12.65□□□□□ -0.38
APTX-225ENST00000482687 CDHR2Q9BYE9 1310 aa12.65□□□□□ -0.38
APTX-225ENST00000482687 IFIT2P09913 472 aaKnown RBP12.65□□□□□ -0.38
APTX-225ENST00000482687 TBC1D9BQ66K14 1250 aa12.65□□□□□ -0.38
APTX-225ENST00000482687 TBC1D9Q6ZT07 1266 aa12.65□□□□□ -0.38
APTX-225ENST00000482687 EAF2Q96CJ1 260 aaPredicted RBP12.65□□□□□ -0.38
APTX-225ENST00000482687 OSBPL3Q9H4L5 887 aa12.65□□□□□ -0.38
APTX-225ENST00000482687 GREM2Q9H772 168 aa12.65□□□□□ -0.38
APTX-225ENST00000482687 ZNF652Q9Y2D9 606 aa12.65□□□□□ -0.38
APTX-225ENST00000482687 AK9Q5TCS8 1911 aa12.65□□□□□ -0.38
APTX-225ENST00000482687 CASZ1Q86V15 1759 aa12.65□□□□□ -0.39
APTX-225ENST00000482687 TRIM6-TRIM34B2RNG4 842 aa12.64□□□□□ -0.39
APTX-225ENST00000482687 ZPR1O75312 459 aa12.64□□□□□ -0.39
APTX-225ENST00000482687 APBA3O96018 575 aa12.64□□□□□ -0.39
APTX-225ENST00000482687 CCDC57Q2TAC2 916 aa12.64□□□□□ -0.39
APTX-225ENST00000482687 MTERF4Q7Z6M4 381 aaKnown RBP12.64□□□□□ -0.39
APTX-225ENST00000482687 PROM2Q8N271 834 aa12.64□□□□□ -0.39
APTX-225ENST00000482687 RILPL2Q969X0 211 aa12.64□□□□□ -0.39
APTX-225ENST00000482687 PLA2G12BQ9BX93 195 aa12.64□□□□□ -0.39
APTX-225ENST00000482687 STAP2Q9UGK3 403 aa12.64□□□□□ -0.39
APTX-225ENST00000482687 UBR3Q6ZT12 1888 aa12.64□□□□□ -0.39
APTX-225ENST00000482687 SPEF2Q9C093 1822 aa12.64□□□□□ -0.39
APTX-225ENST00000482687 SH3TC1Q8TE82 1336 aa12.64□□□□□ -0.39
APTX-225ENST00000482687 CDC45O75419 566 aa12.63□□□□□ -0.39
APTX-225ENST00000482687 NTSR2O95665 410 aa12.63□□□□□ -0.39
APTX-225ENST00000482687 CSF1RP07333 972 aa12.63□□□□□ -0.39
APTX-225ENST00000482687 CTSWP56202 376 aa12.63□□□□□ -0.39
APTX-225ENST00000482687 TAF7LQ5H9L4 462 aa12.63□□□□□ -0.39
APTX-225ENST00000482687 ATG9AQ7Z3C6 839 aa12.63□□□□□ -0.39
APTX-225ENST00000482687 CCDC24Q8N4L8 307 aa12.63□□□□□ -0.39
APTX-225ENST00000482687 TTLL11Q8NHH1 800 aa12.63□□□□□ -0.39
APTX-225ENST00000482687 TRIM44Q96DX7 344 aaPredicted RBP12.63□□□□□ -0.39
APTX-225ENST00000482687 NARFQ9UHQ1 456 aa12.63□□□□□ -0.39
APTX-225ENST00000482687 DDX11L8A8MPP1 907 aa12.63□□□□□ -0.39
APTX-225ENST00000482687 PDE8AO60658 829 aa12.63□□□□□ -0.39
APTX-225ENST00000482687 TXNRD1Q16881 649 aa12.63□□□□□ -0.39
APTX-225ENST00000482687 PARP10Q53GL7 1025 aa12.63□□□□□ -0.39
APTX-225ENST00000482687 TRAPPC3LQ5T215 181 aa12.63□□□□□ -0.39
APTX-225ENST00000482687 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.63□□□□□ -0.39
APTX-225ENST00000482687 PI4K2BQ8TCG2 481 aa12.63□□□□□ -0.39
APTX-225ENST00000482687 SLKQ9H2G2 1235 aaPredicted RBP12.63□□□□□ -0.39
APTX-225ENST00000482687 TRAK2O60296 914 aa12.62□□□□□ -0.39
APTX-225ENST00000482687 OFD1O75665 1012 aa12.62□□□□□ -0.39
APTX-225ENST00000482687 ITGA6P23229 1130 aa12.62□□□□□ -0.39
APTX-225ENST00000482687 RFC4P35249 363 aa12.62□□□□□ -0.39
APTX-225ENST00000482687 IFIT5Q13325 482 aaKnown RBP12.62□□□□□ -0.39
APTX-225ENST00000482687 ERFEQ4G0M1 354 aa12.62□□□□□ -0.39
APTX-225ENST00000482687 KIAA1211Q6ZU35 1233 aa12.62□□□□□ -0.39
APTX-225ENST00000482687 TAF1P21675 1872 aa12.61□□□□□ -0.39
APTX-225ENST00000482687 EYA2O00167 538 aa12.61□□□□□ -0.39
APTX-225ENST00000482687 TNNI3KQ59H18 835 aa12.61□□□□□ -0.39
APTX-225ENST00000482687 CLEC4GQ6UXB4 293 aa12.61□□□□□ -0.39
APTX-225ENST00000482687 FPGT-TNNI3KV9GXZ4 949 aa12.61□□□□□ -0.39
APTX-225ENST00000482687 LAMB2P55268 1798 aa12.61□□□□□ -0.39
APTX-225ENST00000482687 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.61□□□□□ -0.39
APTX-225ENST00000482687 SLC27A3Q5K4L6 730 aa12.61□□□□□ -0.39
APTX-225ENST00000482687 TBC1D32Q96NH3 1257 aa12.61□□□□□ -0.39
APTX-225ENST00000482687 ECHDC1Q9NTX5 307 aa12.61□□□□□ -0.39
APTX-225ENST00000482687 CHMP5Q9NZZ3 219 aa12.61□□□□□ -0.39
APTX-225ENST00000482687 TNS1Q9HBL0 1735 aaKnown RBP12.61□□□□□ -0.39
APTX-225ENST00000482687 ANKRD18BA2A2Z9 1011 aa12.6□□□□□ -0.39
APTX-225ENST00000482687 C3orf67Q6ZVT6 689 aa12.6□□□□□ -0.39
APTX-225ENST00000482687 NEUROD6Q96NK8 337 aa12.6□□□□□ -0.39
APTX-225ENST00000482687 DBNDD2Q9BQY9 259 aa12.6□□□□□ -0.39
APTX-225ENST00000482687 SEC31BQ9NQW1 1179 aa12.6□□□□□ -0.39
APTX-225ENST00000482687 AOX1Q06278 1338 aa12.6□□□□□ -0.39
APTX-225ENST00000482687 USP42Q9H9J4 1324 aaKnown RBP12.6□□□□□ -0.39
APTX-225ENST00000482687 A0A0U1RQG5 324 aaPredicted RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 1221.9 ms