RNA–Protein interactions for RNA: ENST00000482645.1

TRAPPC12-220, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 1,538 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-220ENST00000482645 SRGNP10124 158 aa24.99■■□□□ 1.59
TRAPPC12-220ENST00000482645 EPHA10Q5JZY3 1008 aa24.99■■□□□ 1.59
TRAPPC12-220ENST00000482645 GTF3C3Q9Y5Q9 886 aa24.99■■□□□ 1.59
TRAPPC12-220ENST00000482645 KLRG2A4D1S0 409 aaPredicted RBP24.98■■□□□ 1.59
TRAPPC12-220ENST00000482645 CRY2Q49AN0 593 aa24.98■■□□□ 1.59
TRAPPC12-220ENST00000482645 CCDC152Q4G0S7 254 aa24.98■■□□□ 1.59
TRAPPC12-220ENST00000482645 PLA2G12BQ9BX93 195 aa24.98■■□□□ 1.59
TRAPPC12-220ENST00000482645 BICC1Q9H694 974 aaKnown RBP24.98■■□□□ 1.59
TRAPPC12-220ENST00000482645 LRRFIP2Q9Y608 721 aaKnown RBP24.98■■□□□ 1.59
TRAPPC12-220ENST00000482645 ZBTB7BO15156 539 aaPredicted RBP24.97■■□□□ 1.59
TRAPPC12-220ENST00000482645 NPR1P16066 1061 aa24.97■■□□□ 1.59
TRAPPC12-220ENST00000482645 FOXO4P98177 505 aa24.97■■□□□ 1.59
TRAPPC12-220ENST00000482645 MASTLQ96GX5 879 aa24.97■■□□□ 1.59
TRAPPC12-220ENST00000482645 KAZALD1Q96I82 304 aa24.97■■□□□ 1.59
TRAPPC12-220ENST00000482645 C1orf115Q9H7X2 142 aa24.97■■□□□ 1.59
TRAPPC12-220ENST00000482645 PDZRN3Q9UPQ7 1066 aa24.97■■□□□ 1.59
TRAPPC12-220ENST00000482645 SF3B3Q15393 1217 aaKnown RBP24.96■■□□□ 1.59
TRAPPC12-220ENST00000482645 LMBR1LQ6UX01 489 aa24.96■■□□□ 1.59
TRAPPC12-220ENST00000482645 TTLL11Q8NHH1 800 aa24.96■■□□□ 1.59
TRAPPC12-220ENST00000482645 DDX46Q7L014 1031 aaKnown RBP24.96■■□□□ 1.59
TRAPPC12-220ENST00000482645 RBM17Q96I25 401 aaKnown RBP24.96■■□□□ 1.59
TRAPPC12-220ENST00000482645 GREM2Q9H772 168 aa24.96■■□□□ 1.59
TRAPPC12-220ENST00000482645 DLEC1Q9Y238 1755 aa24.95■■□□□ 1.59
TRAPPC12-220ENST00000482645 CACNA1SQ13698 1873 aa24.95■■□□□ 1.59
TRAPPC12-220ENST00000482645 GNAI2P04899 355 aa24.95■■□□□ 1.58
TRAPPC12-220ENST00000482645 KCNA3P22001 575 aa24.95■■□□□ 1.58
TRAPPC12-220ENST00000482645 FAM161AQ3B820 660 aa24.95■■□□□ 1.58
TRAPPC12-220ENST00000482645 HDAC5Q9UQL6 1122 aa24.95■■□□□ 1.58
TRAPPC12-220ENST00000482645 STYK1Q6J9G0 422 aa24.94■■□□□ 1.58
TRAPPC12-220ENST00000482645 PIM2Q9P1W9 311 aa24.94■■□□□ 1.58
TRAPPC12-220ENST00000482645 PELP1Q8IZL8 1130 aaKnown RBP24.93■■□□□ 1.58
TRAPPC12-220ENST00000482645 SEC31BQ9NQW1 1179 aa24.93■■□□□ 1.58
TRAPPC12-220ENST00000482645 TAF1P21675 1872 aa24.93■■□□□ 1.58
TRAPPC12-220ENST00000482645 CSF1RP07333 972 aa24.92■■□□□ 1.58
TRAPPC12-220ENST00000482645 ANKRD44Q8N8A2 993 aa24.92■■□□□ 1.58
TRAPPC12-220ENST00000482645 CNKSR1Q969H4 720 aa24.91■■□□□ 1.58
TRAPPC12-220ENST00000482645 CHMP4BQ9H444 224 aaKnown RBP24.91■■□□□ 1.58
TRAPPC12-220ENST00000482645 ZNF219Q9P2Y4 722 aaPredicted RBP24.91■■□□□ 1.58
TRAPPC12-220ENST00000482645 ITGA6P23229 1130 aa24.91■■□□□ 1.58
TRAPPC12-220ENST00000482645 ALDH1B1P30837 517 aa24.91■■□□□ 1.58
TRAPPC12-220ENST00000482645 HOXA10P31260 410 aaPredicted RBP24.91■■□□□ 1.58
TRAPPC12-220ENST00000482645 TTLL6Q8N841 843 aa24.91■■□□□ 1.58
TRAPPC12-220ENST00000482645 BCS1LQ9Y276 419 aa24.91■■□□□ 1.58
TRAPPC12-220ENST00000482645 BRCA1P38398 1863 aaKnown RBP24.9■■□□□ 1.58
TRAPPC12-220ENST00000482645 IFIT5Q13325 482 aaKnown RBP24.9■■□□□ 1.58
TRAPPC12-220ENST00000482645 CCDC57Q2TAC2 916 aa24.9■■□□□ 1.58
TRAPPC12-220ENST00000482645 RABL6Q3YEC7 729 aaPredicted RBP24.9■■□□□ 1.58
TRAPPC12-220ENST00000482645 DALRD3Q5D0E6 543 aaKnown RBP24.9■■□□□ 1.58
TRAPPC12-220ENST00000482645 PRPF40BQ6NWY9 871 aaKnown RBP24.9■■□□□ 1.58
TRAPPC12-220ENST00000482645 GRAPQ13588 217 aa24.89■■□□□ 1.57
TRAPPC12-220ENST00000482645 GRAPLQ8TC17 118 aaPredicted RBP24.89■■□□□ 1.57
TRAPPC12-220ENST00000482645 CELF1Q92879 486 aaKnown RBP24.89■■□□□ 1.57
TRAPPC12-220ENST00000482645 CRAMP1Q96RY5 1269 aa24.89■■□□□ 1.57
TRAPPC12-220ENST00000482645 ZBTB40Q9NUA8 1239 aa24.89■■□□□ 1.57
TRAPPC12-220ENST00000482645 UTRNP46939 3433 aa24.89■■□□□ 1.57
TRAPPC12-220ENST00000482645 ANKRD18BA2A2Z9 1011 aa24.88■■□□□ 1.57
TRAPPC12-220ENST00000482645 TAF7LQ5H9L4 462 aa24.88■■□□□ 1.57
TRAPPC12-220ENST00000482645 COL4A1P02462 1669 aa24.88■■□□□ 1.57
TRAPPC12-220ENST00000482645 SLX4Q8IY92 1834 aa24.88■■□□□ 1.57
TRAPPC12-220ENST00000482645 CDC5LQ99459 802 aaKnown RBP24.87■■□□□ 1.57
TRAPPC12-220ENST00000482645 RTL9Q8NET4 1388 aa24.87■■□□□ 1.57
TRAPPC12-220ENST00000482645 PPEF1O14829 653 aaPredicted RBP24.86■■□□□ 1.57
TRAPPC12-220ENST00000482645 ANKRD18AQ8IVF6 992 aa24.86■■□□□ 1.57
TRAPPC12-220ENST00000482645 SPEF2Q9C093 1822 aa24.86■■□□□ 1.57
TRAPPC12-220ENST00000482645 SRGAP3O43295 1099 aa24.86■■□□□ 1.57
TRAPPC12-220ENST00000482645 ERICH6BQ5W0A0 696 aa24.86■■□□□ 1.57
TRAPPC12-220ENST00000482645 ZNF594Q96JF6 807 aaPredicted RBP24.86■■□□□ 1.57
TRAPPC12-220ENST00000482645 RPS8P62241 208 aaKnown RBP24.85■■□□□ 1.57
TRAPPC12-220ENST00000482645 SLC51AQ86UW1 340 aa24.85■■□□□ 1.57
TRAPPC12-220ENST00000482645 C21orf2O43822 256 aa24.84■■□□□ 1.57
TRAPPC12-220ENST00000482645 IGHMBP2P38935 993 aaKnown RBP24.84■■□□□ 1.57
TRAPPC12-220ENST00000482645 KLHDC4Q8TBB5 520 aa24.84■■□□□ 1.57
TRAPPC12-220ENST00000482645 BBOX1O75936 387 aa24.83■■□□□ 1.57
TRAPPC12-220ENST00000482645 GPR162Q16538 588 aa24.83■■□□□ 1.57
TRAPPC12-220ENST00000482645 OLFM4Q6UX06 510 aa24.83■■□□□ 1.57
TRAPPC12-220ENST00000482645 MPHOSPH8Q99549 860 aa24.83■■□□□ 1.57
TRAPPC12-220ENST00000482645 PNMA6EA0A0J9YXQ4 647 aa24.82■■□□□ 1.56
TRAPPC12-220ENST00000482645 CEP85Q6P2H3 762 aa24.82■■□□□ 1.56
TRAPPC12-220ENST00000482645 TMX4Q9H1E5 349 aaPredicted RBP24.81■■□□□ 1.56
TRAPPC12-220ENST00000482645 YBX3P16989 372 aaKnown RBP eCLIP24.81■■□□□ 1.56
TRAPPC12-220ENST00000482645 ATP8B2P98198 1209 aa24.8■■□□□ 1.56
TRAPPC12-220ENST00000482645 MTX1Q13505 466 aa24.8■■□□□ 1.56
TRAPPC12-220ENST00000482645 CNNM1Q9NRU3 951 aa24.8■■□□□ 1.56
TRAPPC12-220ENST00000482645 AAMPQ13685 434 aa24.79■■□□□ 1.56
TRAPPC12-220ENST00000482645 LDHAL6AQ6ZMR3 332 aa24.79■■□□□ 1.56
TRAPPC12-220ENST00000482645 SIL1Q9H173 461 aa24.79■■□□□ 1.56
TRAPPC12-220ENST00000482645 PA2G4Q9UQ80 394 aaKnown RBP24.79■■□□□ 1.56
TRAPPC12-220ENST00000482645 ATP6V0A2Q9Y487 856 aa24.79■■□□□ 1.56
TRAPPC12-220ENST00000482645 ARFGEF1Q9Y6D6 1849 aa24.78■■□□□ 1.56
TRAPPC12-220ENST00000482645 RFX5P48382 616 aaPredicted RBP24.78■■□□□ 1.56
TRAPPC12-220ENST00000482645 BSDC1Q9NW68 430 aaPredicted RBP24.78■■□□□ 1.56
TRAPPC12-220ENST00000482645 PPP4R2Q9NY27 417 aa24.78■■□□□ 1.56
TRAPPC12-220ENST00000482645 PTPN12Q05209 780 aaKnown RBP24.77■■□□□ 1.56
TRAPPC12-220ENST00000482645 TMC4Q7Z404 712 aa24.77■■□□□ 1.56
TRAPPC12-220ENST00000482645 C7orf43Q8WVR3 580 aa24.77■■□□□ 1.56
TRAPPC12-220ENST00000482645 PUS3Q9BZE2 481 aaKnown RBP24.77■■□□□ 1.56
TRAPPC12-220ENST00000482645 RPAP2Q8IXW5 612 aaPredicted RBP24.76■■□□□ 1.55
TRAPPC12-220ENST00000482645 SP8Q8IXZ3 490 aa24.76■■□□□ 1.55
TRAPPC12-220ENST00000482645 CCDC93Q567U6 631 aa24.76■■□□□ 1.55
TRAPPC12-220ENST00000482645 LRRC24Q50LG9 513 aa24.75■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms