RNA–Protein interactions for RNA: ENST00000482458.1

STK40-208, Transcript of serine/threonine kinase 40, human

TSL 3

Gene STK40, Length 900 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
STK40-208	ENST00000482458	KIAA2012	Q0VF49	1180 aa		33.1	■■■□□ 2.89
STK40-208	ENST00000482458	CIAPIN1	Q6FI81	312 aa		33.1	■■■□□ 2.89
STK40-208	ENST00000482458	DDX46	Q7L014	1031 aa	Known RBP	33.1	■■■□□ 2.89
STK40-208	ENST00000482458	TRMT112	Q9UI30	125 aa	Known RBP	33.1	■■■□□ 2.89
STK40-208	ENST00000482458	TMPO	P42166	694 aa	Known RBP	33.09	■■■□□ 2.89
STK40-208	ENST00000482458	TCIRG1	Q13488	830 aa		33.09	■■■□□ 2.89
STK40-208	ENST00000482458	SH3TC1	Q8TE82	1336 aa		33.08	■■■□□ 2.89
STK40-208	ENST00000482458	RAD17	O75943	681 aa		33.08	■■■□□ 2.89
STK40-208	ENST00000482458	GRAP	Q13588	217 aa		33.08	■■■□□ 2.89
STK40-208	ENST00000482458	GRAPL	Q8TC17	118 aa	Predicted RBP	33.08	■■■□□ 2.89
STK40-208	ENST00000482458	BCL2L13	Q9BXK5	485 aa		33.08	■■■□□ 2.89
STK40-208	ENST00000482458	LAMB2	P55268	1798 aa		33.07	■■■□□ 2.88
STK40-208	ENST00000482458	CELF2	O95319	508 aa	Known RBP	33.07	■■■□□ 2.88
STK40-208	ENST00000482458	GLIS2	Q9BZE0	524 aa	Predicted RBP	33.07	■■■□□ 2.88
STK40-208	ENST00000482458	ANKRD36C	Q5JPF3	1778 aa		33.06	■■■□□ 2.88
STK40-208	ENST00000482458	CDHR2	Q9BYE9	1310 aa		33.06	■■■□□ 2.88
STK40-208	ENST00000482458	TNIP1	Q15025	636 aa		33.06	■■■□□ 2.88
STK40-208	ENST00000482458	AOC2	O75106	756 aa		33.05	■■■□□ 2.88
STK40-208	ENST00000482458	SAPCD2	Q86UD0	394 aa		33.05	■■■□□ 2.88
STK40-208	ENST00000482458	PGAP2	Q9UHJ9	254 aa		33.05	■■■□□ 2.88
STK40-208	ENST00000482458	MAP2K2	P36507	400 aa		33.04	■■■□□ 2.88
STK40-208	ENST00000482458	KRT24	Q2M2I5	525 aa		33.03	■■■□□ 2.88
STK40-208	ENST00000482458	ZNF428	Q96B54	188 aa		33.03	■■■□□ 2.88
STK40-208	ENST00000482458	HIRA	P54198	1017 aa	Predicted RBP	33.02	■■■□□ 2.88
STK40-208	ENST00000482458	TRPM4	Q8TD43	1214 aa		33.02	■■■□□ 2.88
STK40-208	ENST00000482458	ZC3H15	Q8WU90	426 aa	Known RBP	33.02	■■■□□ 2.88
STK40-208	ENST00000482458	TSKS	Q9UJT2	592 aa		33.02	■■■□□ 2.88
STK40-208	ENST00000482458	YDJC	A8MPS7	323 aa		33.01	■■■□□ 2.87
STK40-208	ENST00000482458	TMC4	Q7Z404	712 aa		33.01	■■■□□ 2.87
STK40-208	ENST00000482458	ZNF408	Q9H9D4	720 aa		33.01	■■■□□ 2.87
STK40-208	ENST00000482458	RALBP1	Q15311	655 aa		33	■■■□□ 2.87
STK40-208	ENST00000482458	NEUROD2	Q15784	382 aa		33	■■■□□ 2.87
STK40-208	ENST00000482458	CHPF2	Q9P2E5	772 aa		33	■■■□□ 2.87
STK40-208	ENST00000482458	CNOT7	Q9UIV1	285 aa	Known RBP	33	■■■□□ 2.87
STK40-208	ENST00000482458	CHL1	O00533	1208 aa		32.99	■■■□□ 2.87
STK40-208	ENST00000482458	HHIPL1	Q96JK4	782 aa		32.99	■■■□□ 2.87
STK40-208	ENST00000482458	SHTN1	A0MZ66	631 aa		32.98	■■■□□ 2.87
STK40-208	ENST00000482458	CDC37L1	Q7L3B6	337 aa		32.98	■■■□□ 2.87
STK40-208	ENST00000482458	CCDC146	Q8IYE0	955 aa		32.98	■■■□□ 2.87
STK40-208	ENST00000482458	DUOX1	Q9NRD9	1551 aa		32.98	■■■□□ 2.87
STK40-208	ENST00000482458	LAS1L	Q9Y4W2	734 aa	Known RBP	32.98	■■■□□ 2.87
STK40-208	ENST00000482458		H7C1D1	291 aa		32.97	■■■□□ 2.87
STK40-208	ENST00000482458	MICALL2	Q8IY33	904 aa		32.96	■■■□□ 2.87
STK40-208	ENST00000482458	PLBD2	Q8NHP8	589 aa		32.96	■■■□□ 2.87
STK40-208	ENST00000482458	TAF1	P21675	1872 aa		32.95	■■■□□ 2.87
STK40-208	ENST00000482458	HDGFL1	Q5TGJ6	251 aa		32.95	■■■□□ 2.87
STK40-208	ENST00000482458	ZBTB12	Q9Y330	459 aa	Predicted RBP	32.95	■■■□□ 2.87
STK40-208	ENST00000482458	CA12	O43570	354 aa		32.94	■■■□□ 2.86
STK40-208	ENST00000482458	WASHC4	Q2M389	1173 aa		32.94	■■■□□ 2.86
STK40-208	ENST00000482458	FAM89A	Q96GI7	184 aa		32.94	■■■□□ 2.86
STK40-208	ENST00000482458	NSFL1C	Q9UNZ2	370 aa	Known RBP	32.94	■■■□□ 2.86
STK40-208	ENST00000482458	LRRC37A	A6NMS7	1700 aa		32.94	■■■□□ 2.86
STK40-208	ENST00000482458	CCDC85C	A6NKD9	419 aa		32.93	■■■□□ 2.86
STK40-208	ENST00000482458	BRPF1	P55201	1214 aa	Predicted RBP	32.93	■■■□□ 2.86
STK40-208	ENST00000482458	FAM161A	Q3B820	660 aa		32.93	■■■□□ 2.86
STK40-208	ENST00000482458	ANKRD13D	Q6ZTN6	518 aa		32.93	■■■□□ 2.86
STK40-208	ENST00000482458	CELF1	Q92879	486 aa	Known RBP	32.93	■■■□□ 2.86
STK40-208	ENST00000482458	ISCA1	Q9BUE6	129 aa		32.93	■■■□□ 2.86
STK40-208	ENST00000482458	ATP5J2-PTCD1	G3V325	749 aa		32.92	■■■□□ 2.86
STK40-208	ENST00000482458	SF3B3	Q15393	1217 aa	Known RBP	32.92	■■■□□ 2.86
STK40-208	ENST00000482458	USP48	Q86UV5	1035 aa		32.92	■■■□□ 2.86
STK40-208	ENST00000482458	DBNDD1	Q9H9R9	158 aa		32.92	■■■□□ 2.86
STK40-208	ENST00000482458	TRIM35	Q9UPQ4	493 aa		32.92	■■■□□ 2.86
STK40-208	ENST00000482458	PSMD14	O00487	310 aa		32.91	■■■□□ 2.86
STK40-208	ENST00000482458	DPF2	Q92785	391 aa		32.91	■■■□□ 2.86
STK40-208	ENST00000482458	DDX60	Q8IY21	1712 aa	Known RBP	32.91	■■■□□ 2.86
STK40-208	ENST00000482458	C6orf229	H3BNL8	230 aa		32.9	■■■□□ 2.86
STK40-208	ENST00000482458	RIMBP2	O15034	1052 aa		32.9	■■■□□ 2.86
STK40-208	ENST00000482458	HOXB7	P09629	217 aa		32.9	■■■□□ 2.86
STK40-208	ENST00000482458	SAMD7	Q7Z3H4	446 aa		32.9	■■■□□ 2.86
STK40-208	ENST00000482458	DBF4	Q9UBU7	674 aa	Predicted RBP	32.9	■■■□□ 2.86
STK40-208	ENST00000482458	GPSM2	P81274	684 aa		32.88	■■■□□ 2.85
STK40-208	ENST00000482458	RTL5	Q5HYW3	569 aa	Predicted RBP	32.88	■■■□□ 2.85
STK40-208	ENST00000482458	DLK2	Q6UY11	383 aa		32.88	■■■□□ 2.85
STK40-208	ENST00000482458	RUNDC1	Q96C34	613 aa		32.88	■■■□□ 2.85
STK40-208	ENST00000482458	POLL	Q9UGP5	575 aa		32.88	■■■□□ 2.85
STK40-208	ENST00000482458	HUNK	P57058	714 aa		32.87	■■■□□ 2.85
STK40-208	ENST00000482458	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	32.87	■■■□□ 2.85
STK40-208	ENST00000482458	MYBBP1A	Q9BQG0	1328 aa	Known RBP	32.86	■■■□□ 2.85
STK40-208	ENST00000482458	NOG	Q13253	232 aa		32.86	■■■□□ 2.85
STK40-208	ENST00000482458	HYPK	Q9NX55	129 aa		32.86	■■■□□ 2.85
STK40-208	ENST00000482458	ECE2	O60344	883 aa		32.85	■■■□□ 2.85
STK40-208	ENST00000482458	KRT26	Q7Z3Y9	468 aa		32.85	■■■□□ 2.85
STK40-208	ENST00000482458	EYA3	Q99504	573 aa		32.85	■■■□□ 2.85
STK40-208	ENST00000482458	IRS4	O14654	1257 aa	Predicted RBP	32.84	■■■□□ 2.85
STK40-208	ENST00000482458	EGFR	P00533	1210 aa		32.84	■■■□□ 2.85
STK40-208	ENST00000482458	RPS12	P25398	132 aa	Known RBP	32.84	■■■□□ 2.85
STK40-208	ENST00000482458	WDR43	Q15061	677 aa	Known RBP eCLIP	32.84	■■■□□ 2.85
STK40-208	ENST00000482458	DOK7	Q18PE1	504 aa		32.84	■■■□□ 2.85
STK40-208	ENST00000482458	ZIC5	Q96T25	663 aa		32.84	■■■□□ 2.85
STK40-208	ENST00000482458	COL4A1	P02462	1669 aa		32.84	■■■□□ 2.85
STK40-208	ENST00000482458	MCOLN1	Q9GZU1	580 aa		32.83	■■■□□ 2.85
STK40-208	ENST00000482458	KCNQ5	Q9NR82	932 aa		32.83	■■■□□ 2.85
STK40-208	ENST00000482458	RPS8	P62241	208 aa	Known RBP	32.82	■■■□□ 2.84
STK40-208	ENST00000482458	TRIM28	Q13263	835 aa	Known RBP	32.82	■■■□□ 2.84
STK40-208	ENST00000482458	RBM26	Q5T8P6	1007 aa	Known RBP	32.82	■■■□□ 2.84
STK40-208	ENST00000482458	DUSP27	Q5VZP5	1158 aa		32.82	■■■□□ 2.84
STK40-208	ENST00000482458	TBC1D16	Q8TBP0	767 aa		32.82	■■■□□ 2.84
STK40-208	ENST00000482458	RTL9	Q8NET4	1388 aa		32.82	■■■□□ 2.84
STK40-208	ENST00000482458	MLLT1	Q03111	559 aa	Predicted RBP	32.81	■■■□□ 2.84

Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms