RNA–Protein interactions for RNA: ENST00000482320.5

TNPO3-204, Transcript of transportin 3, humanhuman

TSL 1 (best) BASIC

Gene TNPO3, Length 3,585 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO3-204ENST00000482320 LAMA4Q16363 1823 aa9.82□□□□□ -0.84
TNPO3-204ENST00000482320 CHAF1AQ13111 956 aaPredicted RBP9.81□□□□□ -0.84
TNPO3-204ENST00000482320 LRSAM1Q6UWE0 723 aa9.81□□□□□ -0.84
TNPO3-204ENST00000482320 TBC1D9Q6ZT07 1266 aa9.81□□□□□ -0.84
TNPO3-204ENST00000482320 SMARCA5O60264 1052 aaPredicted RBP9.81□□□□□ -0.84
TNPO3-204ENST00000482320 HOXB7P09629 217 aa9.81□□□□□ -0.84
TNPO3-204ENST00000482320 HDAC1Q13547 482 aaPredicted RBP9.81□□□□□ -0.84
TNPO3-204ENST00000482320 SMIM5Q71RC9 77 aa9.81□□□□□ -0.84
TNPO3-204ENST00000482320 ZNF710Q8N1W2 664 aa9.81□□□□□ -0.84
TNPO3-204ENST00000482320 GPT2Q8TD30 523 aa9.81□□□□□ -0.84
TNPO3-204ENST00000482320 TMX1Q9H3N1 280 aa9.81□□□□□ -0.84
TNPO3-204ENST00000482320 CHMP4CQ96CF2 233 aa9.8□□□□□ -0.84
TNPO3-204ENST00000482320 AK7Q96M32 723 aa9.8□□□□□ -0.84
TNPO3-204ENST00000482320 PXDNLA1KZ92 1463 aa9.8□□□□□ -0.84
TNPO3-204ENST00000482320 PALLDQ8WX93 1383 aa9.8□□□□□ -0.84
TNPO3-204ENST00000482320 HEG1Q9ULI3 1381 aa9.8□□□□□ -0.84
TNPO3-204ENST00000482320 PTPRCP08575 1304 aa9.8□□□□□ -0.84
TNPO3-204ENST00000482320 UBTFL1P0CB47 393 aaPredicted RBP9.8□□□□□ -0.84
TNPO3-204ENST00000482320 ZBTB1Q9Y2K1 713 aa9.8□□□□□ -0.84
TNPO3-204ENST00000482320 GNPATO15228 680 aa9.8□□□□□ -0.84
TNPO3-204ENST00000482320 OS9Q13438 667 aaPredicted RBP9.8□□□□□ -0.84
TNPO3-204ENST00000482320 CWF19L2Q2TBE0 894 aaKnown RBP9.8□□□□□ -0.84
TNPO3-204ENST00000482320 TAF3Q5VWG9 929 aa9.8□□□□□ -0.84
TNPO3-204ENST00000482320 TTLL7Q6ZT98 887 aa9.8□□□□□ -0.84
TNPO3-204ENST00000482320 CHD1LQ86WJ1 897 aa9.8□□□□□ -0.84
TNPO3-204ENST00000482320 C4AP0C0L4 1744 aa9.8□□□□□ -0.84
TNPO3-204ENST00000482320 C4BP0C0L5 1744 aa9.8□□□□□ -0.84
TNPO3-204ENST00000482320 DLEC1Q9Y238 1755 aa9.79□□□□□ -0.84
TNPO3-204ENST00000482320 HCLS1P14317 486 aaPredicted RBP9.79□□□□□ -0.84
TNPO3-204ENST00000482320 CCT4P50991 539 aaKnown RBP9.79□□□□□ -0.84
TNPO3-204ENST00000482320 NOLC1Q14978 699 aaKnown RBP eCLIP9.79□□□□□ -0.84
TNPO3-204ENST00000482320 KIF2CQ99661 725 aa9.79□□□□□ -0.84
TNPO3-204ENST00000482320 TSPY26PQ9H489 355 aa9.79□□□□□ -0.84
TNPO3-204ENST00000482320 TNS2Q63HR2 1409 aa9.79□□□□□ -0.84
TNPO3-204ENST00000482320 KSR2Q6VAB6 950 aa9.79□□□□□ -0.84
TNPO3-204ENST00000482320 TMEM51Q9NW97 253 aa9.79□□□□□ -0.84
TNPO3-204ENST00000482320 ZNF646O15015 1829 aaPredicted RBP9.79□□□□□ -0.84
TNPO3-204ENST00000482320 DZIP3Q86Y13 1208 aaKnown RBP9.79□□□□□ -0.84
TNPO3-204ENST00000482320 ARHGAP45Q92619 1136 aa9.79□□□□□ -0.84
TNPO3-204ENST00000482320 C16orf45Q96MC5 204 aaPredicted RBP9.79□□□□□ -0.84
TNPO3-204ENST00000482320 CCDC85AQ96PX6 553 aaPredicted RBP9.79□□□□□ -0.84
TNPO3-204ENST00000482320 UPF3BQ9BZI7 483 aaKnown RBP9.79□□□□□ -0.84
TNPO3-204ENST00000482320 CRKLP46109 303 aaKnown RBP9.78□□□□□ -0.84
TNPO3-204ENST00000482320 BMP2KLQ5H9B9 411 aa9.78□□□□□ -0.84
TNPO3-204ENST00000482320 OTUD7AQ8TE49 926 aaPredicted RBP9.78□□□□□ -0.84
TNPO3-204ENST00000482320 MEIS3Q99687 375 aa9.78□□□□□ -0.84
TNPO3-204ENST00000482320 BCL2L12Q9HB09 334 aa9.78□□□□□ -0.84
TNPO3-204ENST00000482320 SPEF2Q9C093 1822 aa9.78□□□□□ -0.84
TNPO3-204ENST00000482320 ZPR1O75312 459 aa9.78□□□□□ -0.84
TNPO3-204ENST00000482320 CLEC17AQ6ZS10 378 aa9.78□□□□□ -0.84
TNPO3-204ENST00000482320 IPO4Q8TEX9 1081 aaKnown RBP9.78□□□□□ -0.84
TNPO3-204ENST00000482320 CCDC87Q9NVE4 849 aa9.78□□□□□ -0.84
TNPO3-204ENST00000482320 TFCP2L1Q9NZI6 479 aa9.78□□□□□ -0.84
TNPO3-204ENST00000482320 NUCB1Q02818 461 aa9.78□□□□□ -0.84
TNPO3-204ENST00000482320 RABEP1Q15276 862 aa9.78□□□□□ -0.84
TNPO3-204ENST00000482320 LRP5O75197 1615 aa9.77□□□□□ -0.84
TNPO3-204ENST00000482320 GADD45BO75293 160 aaPredicted RBP9.77□□□□□ -0.85
TNPO3-204ENST00000482320 NEK4P51957 841 aa9.77□□□□□ -0.85
TNPO3-204ENST00000482320 RTCBQ9Y3I0 505 aaKnown RBP9.77□□□□□ -0.85
TNPO3-204ENST00000482320 SOS1Q07889 1333 aaPredicted RBP9.77□□□□□ -0.85
TNPO3-204ENST00000482320 A0A087WZG4 1122 aa9.77□□□□□ -0.85
TNPO3-204ENST00000482320 NBPF26B4DH59 902 aa9.77□□□□□ -0.85
TNPO3-204ENST00000482320 FIBPO43427 364 aa9.77□□□□□ -0.85
TNPO3-204ENST00000482320 MBD3O95983 291 aa9.77□□□□□ -0.85
TNPO3-204ENST00000482320 RFC4P35249 363 aa9.77□□□□□ -0.85
TNPO3-204ENST00000482320 NBPF14Q5TI25 921 aa9.77□□□□□ -0.85
TNPO3-204ENST00000482320 NBPF10Q6P3W6 841 aaKnown RBP9.77□□□□□ -0.85
TNPO3-204ENST00000482320 NBPF15Q8N660 670 aa9.77□□□□□ -0.85
TNPO3-204ENST00000482320 SYAP1Q96A49 352 aaPredicted RBP9.77□□□□□ -0.85
TNPO3-204ENST00000482320 GNAI3P08754 354 aa9.76□□□□□ -0.85
TNPO3-204ENST00000482320 SKIDA1Q1XH10 827 aa9.76□□□□□ -0.85
TNPO3-204ENST00000482320 PIBF1Q8WXW3 757 aa9.76□□□□□ -0.85
TNPO3-204ENST00000482320 ITPK1Q13572 414 aa9.76□□□□□ -0.85
TNPO3-204ENST00000482320 UBE3BQ7Z3V4 1068 aa9.76□□□□□ -0.85
TNPO3-204ENST00000482320 DIAPH3Q9NSV4 1193 aa9.76□□□□□ -0.85
TNPO3-204ENST00000482320 ST18O60284 1047 aa9.76□□□□□ -0.85
TNPO3-204ENST00000482320 CDC45O75419 566 aa9.76□□□□□ -0.85
TNPO3-204ENST00000482320 ADCY5O95622 1261 aa9.76□□□□□ -0.85
TNPO3-204ENST00000482320 GNAI2P04899 355 aa9.76□□□□□ -0.85
TNPO3-204ENST00000482320 CYP19A1P11511 503 aaPredicted RBP9.76□□□□□ -0.85
TNPO3-204ENST00000482320 SLC4A9Q96Q91 983 aa9.76□□□□□ -0.85
TNPO3-204ENST00000482320 RGS17Q9UGC6 210 aaPredicted RBP9.76□□□□□ -0.85
TNPO3-204ENST00000482320 ANKRD36CQ5JPF3 1778 aa9.76□□□□□ -0.85
TNPO3-204ENST00000482320 DISP2A7MBM2 1401 aa9.75□□□□□ -0.85
TNPO3-204ENST00000482320 RIOK3O14730 519 aaKnown RBP9.75□□□□□ -0.85
TNPO3-204ENST00000482320 EN1Q05925 392 aaPredicted RBP9.75□□□□□ -0.85
TNPO3-204ENST00000482320 ST7Q9NRC1 585 aa9.75□□□□□ -0.85
TNPO3-204ENST00000482320 ECM29Q5VYK3 1845 aa9.75□□□□□ -0.85
TNPO3-204ENST00000482320 BCL9O00512 1426 aa9.75□□□□□ -0.85
TNPO3-204ENST00000482320 HMMRO75330 724 aa9.75□□□□□ -0.85
TNPO3-204ENST00000482320 TAF7LQ5H9L4 462 aa9.75□□□□□ -0.85
TNPO3-204ENST00000482320 CWC22Q9HCG8 908 aaKnown RBP9.75□□□□□ -0.85
TNPO3-204ENST00000482320 LRRFIP2Q9Y608 721 aaKnown RBP9.75□□□□□ -0.85
TNPO3-204ENST00000482320 ONECUT3O60422 494 aaPredicted RBP9.75□□□□□ -0.85
TNPO3-204ENST00000482320 CAMK4Q16566 473 aa9.75□□□□□ -0.85
TNPO3-204ENST00000482320 TRMT112Q9UI30 125 aaKnown RBP9.75□□□□□ -0.85
TNPO3-204ENST00000482320 SCN7AQ01118 1682 aa9.75□□□□□ -0.85
TNPO3-204ENST00000482320 TXNRD1Q16881 649 aa9.74□□□□□ -0.85
TNPO3-204ENST00000482320 TRAPPC3LQ5T215 181 aa9.74□□□□□ -0.85
TNPO3-204ENST00000482320 LINS1Q8NG48 757 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms