RNA–Protein interactions for RNA: ENST00000482257.1

HLA-F-225, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 585 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-225ENST00000482257 RIC1Q4ADV7 1423 aa19.34■□□□□ 0.69
HLA-F-225ENST00000482257 CHRNA5P30532 468 aa19.33■□□□□ 0.68
HLA-F-225ENST00000482257 NLRP3Q96P20 1036 aa19.33■□□□□ 0.68
HLA-F-225ENST00000482257 C1orf115Q9H7X2 142 aa19.33■□□□□ 0.68
HLA-F-225ENST00000482257 DDX60Q8IY21 1712 aaKnown RBP19.32■□□□□ 0.68
HLA-F-225ENST00000482257 HMMRO75330 724 aa19.32■□□□□ 0.68
HLA-F-225ENST00000482257 HCLS1P14317 486 aaPredicted RBP19.32■□□□□ 0.68
HLA-F-225ENST00000482257 SYNE4Q8N205 404 aa19.32■□□□□ 0.68
HLA-F-225ENST00000482257 BICC1Q9H694 974 aaKnown RBP19.32■□□□□ 0.68
HLA-F-225ENST00000482257 ANKRD31Q8N7Z5 1873 aa19.32■□□□□ 0.68
HLA-F-225ENST00000482257 CTSWP56202 376 aa19.31■□□□□ 0.68
HLA-F-225ENST00000482257 RABL6Q3YEC7 729 aaPredicted RBP19.31■□□□□ 0.68
HLA-F-225ENST00000482257 BRIP1Q9BX63 1249 aa19.31■□□□□ 0.68
HLA-F-225ENST00000482257 BCS1LQ9Y276 419 aa19.31■□□□□ 0.68
HLA-F-225ENST00000482257 ABCC12Q96J65 1359 aa19.31■□□□□ 0.68
HLA-F-225ENST00000482257 PDE6BP35913 854 aa19.3■□□□□ 0.68
HLA-F-225ENST00000482257 FOXO4P98177 505 aa19.3■□□□□ 0.68
HLA-F-225ENST00000482257 MTX1Q13505 466 aa19.3■□□□□ 0.68
HLA-F-225ENST00000482257 CCDC152Q4G0S7 254 aa19.3■□□□□ 0.68
HLA-F-225ENST00000482257 LMBR1LQ6UX01 489 aa19.3■□□□□ 0.68
HLA-F-225ENST00000482257 KAZALD1Q96I82 304 aa19.3■□□□□ 0.68
HLA-F-225ENST00000482257 PDZRN3Q9UPQ7 1066 aa19.3■□□□□ 0.68
HLA-F-225ENST00000482257 CSF1RP07333 972 aa19.29■□□□□ 0.68
HLA-F-225ENST00000482257 ATP8B2P98198 1209 aa19.29■□□□□ 0.68
HLA-F-225ENST00000482257 SF3B3Q15393 1217 aaKnown RBP19.29■□□□□ 0.68
HLA-F-225ENST00000482257 CEP85Q6P2H3 762 aa19.29■□□□□ 0.68
HLA-F-225ENST00000482257 ANKRD44Q8N8A2 993 aa19.29■□□□□ 0.68
HLA-F-225ENST00000482257 CHMP3Q9Y3E7 222 aa19.29■□□□□ 0.68
HLA-F-225ENST00000482257 ARFGEF1Q9Y6D6 1849 aa19.29■□□□□ 0.68
HLA-F-225ENST00000482257 DLEC1Q9Y238 1755 aa19.29■□□□□ 0.68
HLA-F-225ENST00000482257 EPHA10Q5JZY3 1008 aa19.28■□□□□ 0.68
HLA-F-225ENST00000482257 CCDC24Q8N4L8 307 aa19.28■□□□□ 0.68
HLA-F-225ENST00000482257 TTLL11Q8NHH1 800 aa19.28■□□□□ 0.68
HLA-F-225ENST00000482257 COL11A2P13942 1736 aaPredicted RBP19.28■□□□□ 0.68
HLA-F-225ENST00000482257 SRGAP3O43295 1099 aa19.27■□□□□ 0.68
HLA-F-225ENST00000482257 CCDC57Q2TAC2 916 aa19.27■□□□□ 0.68
HLA-F-225ENST00000482257 RWDD1Q9H446 243 aaPredicted RBP19.27■□□□□ 0.68
HLA-F-225ENST00000482257 PPP4R2Q9NY27 417 aa19.27■□□□□ 0.68
HLA-F-225ENST00000482257 PCDHB15Q9Y5E8 787 aa19.27■□□□□ 0.68
HLA-F-225ENST00000482257 RTL9Q8NET4 1388 aa19.27■□□□□ 0.68
HLA-F-225ENST00000482257 IFIT5Q13325 482 aaKnown RBP19.26■□□□□ 0.67
HLA-F-225ENST00000482257 RPGRQ92834 1020 aaKnown RBP19.26■□□□□ 0.67
HLA-F-225ENST00000482257 PIM2Q9P1W9 311 aa19.26■□□□□ 0.67
HLA-F-225ENST00000482257 ANKRD18BA2A2Z9 1011 aa19.25■□□□□ 0.67
HLA-F-225ENST00000482257 KLRG2A4D1S0 409 aaPredicted RBP19.25■□□□□ 0.67
HLA-F-225ENST00000482257 SSH3Q8TE77 659 aa19.25■□□□□ 0.67
HLA-F-225ENST00000482257 HDAC1Q13547 482 aaPredicted RBP19.24■□□□□ 0.67
HLA-F-225ENST00000482257 FAM161AQ3B820 660 aa19.24■□□□□ 0.67
HLA-F-225ENST00000482257 CRY2Q49AN0 593 aa19.24■□□□□ 0.67
HLA-F-225ENST00000482257 TAF7LQ5H9L4 462 aa19.24■□□□□ 0.67
HLA-F-225ENST00000482257 DDX46Q7L014 1031 aaKnown RBP19.24■□□□□ 0.67
HLA-F-225ENST00000482257 CDC5LQ99459 802 aaKnown RBP19.24■□□□□ 0.67
HLA-F-225ENST00000482257 TNRC6CQ9HCJ0 1690 aaKnown RBP19.24■□□□□ 0.67
HLA-F-225ENST00000482257 PNMA6EA0A0J9YXQ4 647 aa19.23■□□□□ 0.67
HLA-F-225ENST00000482257 H0YIN7 160 aa19.23■□□□□ 0.67
HLA-F-225ENST00000482257 ITGA6P23229 1130 aa19.23■□□□□ 0.67
HLA-F-225ENST00000482257 POLA2Q14181 598 aa19.23■□□□□ 0.67
HLA-F-225ENST00000482257 DALRD3Q5D0E6 543 aaKnown RBP19.23■□□□□ 0.67
HLA-F-225ENST00000482257 RBM17Q96I25 401 aaKnown RBP19.23■□□□□ 0.67
HLA-F-225ENST00000482257 CCDC136Q96JN2 1154 aa19.23■□□□□ 0.67
HLA-F-225ENST00000482257 CCDC85AQ96PX6 553 aaPredicted RBP19.23■□□□□ 0.67
HLA-F-225ENST00000482257 GREM2Q9H772 168 aa19.23■□□□□ 0.67
HLA-F-225ENST00000482257 C3orf67Q6ZVT6 689 aa19.22■□□□□ 0.67
HLA-F-225ENST00000482257 C2CD5Q86YS7 1000 aa19.22■□□□□ 0.67
HLA-F-225ENST00000482257 SIRT2Q8IXJ6 389 aa19.22■□□□□ 0.67
HLA-F-225ENST00000482257 NPR1P16066 1061 aa19.21■□□□□ 0.67
HLA-F-225ENST00000482257 HOXA10P31260 410 aaPredicted RBP19.21■□□□□ 0.67
HLA-F-225ENST00000482257 HSP90AB4PQ58FF6 505 aa19.21■□□□□ 0.67
HLA-F-225ENST00000482257 MASTLQ96GX5 879 aa19.21■□□□□ 0.67
HLA-F-225ENST00000482257 COPRSQ9NQ92 184 aa19.21■□□□□ 0.67
HLA-F-225ENST00000482257 FBXO3Q9UK99 471 aa19.21■□□□□ 0.67
HLA-F-225ENST00000482257 GTF3C3Q9Y5Q9 886 aa19.21■□□□□ 0.67
HLA-F-225ENST00000482257 SRGNP10124 158 aa19.2■□□□□ 0.66
HLA-F-225ENST00000482257 ALDH1B1P30837 517 aa19.2■□□□□ 0.66
HLA-F-225ENST00000482257 IGHMBP2P38935 993 aaKnown RBP19.2■□□□□ 0.66
HLA-F-225ENST00000482257 ARHGAP27Q6ZUM4 889 aa19.2■□□□□ 0.66
HLA-F-225ENST00000482257 CRAMP1Q96RY5 1269 aa19.2■□□□□ 0.66
HLA-F-225ENST00000482257 RFX5P48382 616 aaPredicted RBP19.19■□□□□ 0.66
HLA-F-225ENST00000482257 G3BP1Q13283 466 aaKnown RBP eCLIP19.19■□□□□ 0.66
HLA-F-225ENST00000482257 STYK1Q6J9G0 422 aa19.19■□□□□ 0.66
HLA-F-225ENST00000482257 ANKRD18AQ8IVF6 992 aa19.19■□□□□ 0.66
HLA-F-225ENST00000482257 GCC1Q96CN9 775 aa19.19■□□□□ 0.66
HLA-F-225ENST00000482257 MPHOSPH8Q99549 860 aa19.19■□□□□ 0.66
HLA-F-225ENST00000482257 SURF6O75683 361 aaKnown RBP19.18■□□□□ 0.66
HLA-F-225ENST00000482257 PTPN12Q05209 780 aaKnown RBP19.18■□□□□ 0.66
HLA-F-225ENST00000482257 GRAPQ13588 217 aa19.18■□□□□ 0.66
HLA-F-225ENST00000482257 TMC4Q7Z404 712 aa19.18■□□□□ 0.66
HLA-F-225ENST00000482257 GRAPLQ8TC17 118 aaPredicted RBP19.18■□□□□ 0.66
HLA-F-225ENST00000482257 DCTPP1Q9H773 170 aa19.18■□□□□ 0.66
HLA-F-225ENST00000482257 SEC31BQ9NQW1 1179 aa19.18■□□□□ 0.66
HLA-F-225ENST00000482257 BBOX1O75936 387 aa19.17■□□□□ 0.66
HLA-F-225ENST00000482257 RPS8P62241 208 aaKnown RBP19.17■□□□□ 0.66
HLA-F-225ENST00000482257 OS9Q13438 667 aaPredicted RBP19.17■□□□□ 0.66
HLA-F-225ENST00000482257 ERC1Q8IUD2 1116 aa19.17■□□□□ 0.66
HLA-F-225ENST00000482257 CNKSR1Q969H4 720 aa19.17■□□□□ 0.66
HLA-F-225ENST00000482257 ZNF622Q969S3 477 aaKnown RBP eCLIP19.17■□□□□ 0.66
HLA-F-225ENST00000482257 NOP58Q9Y2X3 529 aaKnown RBP19.17■□□□□ 0.66
HLA-F-225ENST00000482257 EYA2O00167 538 aa19.16■□□□□ 0.66
HLA-F-225ENST00000482257 RAB11FIP3O75154 756 aa19.16■□□□□ 0.66
HLA-F-225ENST00000482257 CIAO1O76071 339 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms