RNA–Protein interactions for RNA: ENST00000482013.1

GGPS1-205, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 4

Gene GGPS1, Length 470 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-205ENST00000482013 TFCP2Q12800 502 aa14.25□□□□□ -0.13
GGPS1-205ENST00000482013 IFIT5Q13325 482 aaKnown RBP14.25□□□□□ -0.13
GGPS1-205ENST00000482013 RTL5Q5HYW3 569 aaPredicted RBP14.25□□□□□ -0.13
GGPS1-205ENST00000482013 ZNF772Q68DY9 489 aaPredicted RBP14.25□□□□□ -0.13
GGPS1-205ENST00000482013 TTLL11Q8NHH1 800 aa14.25□□□□□ -0.13
GGPS1-205ENST00000482013 RUFY2Q8WXA3 655 aa14.25□□□□□ -0.13
GGPS1-205ENST00000482013 SNX21Q969T3 373 aa14.25□□□□□ -0.13
GGPS1-205ENST00000482013 UBN2Q6ZU65 1347 aa14.24□□□□□ -0.13
GGPS1-205ENST00000482013 CCDC8Q9H0W5 538 aaPredicted RBP14.24□□□□□ -0.13
GGPS1-205ENST00000482013 CEP126Q9P2H0 1117 aa14.24□□□□□ -0.13
GGPS1-205ENST00000482013 CCNL1Q9UK58 526 aaPredicted RBP14.24□□□□□ -0.13
GGPS1-205ENST00000482013 AKAP2Q9Y2D5 859 aa14.24□□□□□ -0.13
GGPS1-205ENST00000482013 SCN7AQ01118 1682 aa14.23□□□□□ -0.13
GGPS1-205ENST00000482013 BRWD3Q6RI45 1802 aa14.23□□□□□ -0.13
GGPS1-205ENST00000482013 ANKRD18BA2A2Z9 1011 aa14.23□□□□□ -0.13
GGPS1-205ENST00000482013 SUSD4Q5VX71 490 aa14.23□□□□□ -0.13
GGPS1-205ENST00000482013 KRT27Q7Z3Y8 459 aa14.23□□□□□ -0.13
GGPS1-205ENST00000482013 NARFQ9UHQ1 456 aa14.23□□□□□ -0.13
GGPS1-205ENST00000482013 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.23□□□□□ -0.13
GGPS1-205ENST00000482013 RTL9Q8NET4 1388 aa14.22□□□□□ -0.13
GGPS1-205ENST00000482013 TAF7LQ5H9L4 462 aa14.22□□□□□ -0.13
GGPS1-205ENST00000482013 NIP7Q9Y221 180 aaKnown RBP eCLIP14.22□□□□□ -0.13
GGPS1-205ENST00000482013 RFX7Q2KHR2 1363 aa14.22□□□□□ -0.13
GGPS1-205ENST00000482013 NTSR2O95665 410 aa14.21□□□□□ -0.13
GGPS1-205ENST00000482013 ITGA6P23229 1130 aa14.21□□□□□ -0.13
GGPS1-205ENST00000482013 RBM6P78332 1123 aaKnown RBP14.21□□□□□ -0.13
GGPS1-205ENST00000482013 RABEP1Q15276 862 aa14.21□□□□□ -0.13
GGPS1-205ENST00000482013 PTF1AQ7RTS3 328 aa14.21□□□□□ -0.13
GGPS1-205ENST00000482013 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.21□□□□□ -0.13
GGPS1-205ENST00000482013 IL17RAQ96F46 866 aa14.21□□□□□ -0.13
GGPS1-205ENST00000482013 KIF2CQ99661 725 aa14.21□□□□□ -0.13
GGPS1-205ENST00000482013 DBNLQ9UJU6 430 aaKnown RBP14.21□□□□□ -0.13
GGPS1-205ENST00000482013 RTCBQ9Y3I0 505 aaKnown RBP14.21□□□□□ -0.13
GGPS1-205ENST00000482013 ZNF609O15014 1411 aa14.21□□□□□ -0.13
GGPS1-205ENST00000482013 C4BP0C0L5 1744 aa14.21□□□□□ -0.14
GGPS1-205ENST00000482013 DDX60Q8IY21 1712 aaKnown RBP14.21□□□□□ -0.14
GGPS1-205ENST00000482013 SPEF2Q9C093 1822 aa14.2□□□□□ -0.14
GGPS1-205ENST00000482013 SGSM2O43147 1006 aa14.2□□□□□ -0.14
GGPS1-205ENST00000482013 ADRA2BP18089 450 aa14.2□□□□□ -0.14
GGPS1-205ENST00000482013 MCCP23508 829 aa14.2□□□□□ -0.14
GGPS1-205ENST00000482013 ANAPC15P60006 121 aa14.2□□□□□ -0.14
GGPS1-205ENST00000482013 LRRC24Q50LG9 513 aa14.2□□□□□ -0.14
GGPS1-205ENST00000482013 SLC27A3Q5K4L6 730 aa14.2□□□□□ -0.14
GGPS1-205ENST00000482013 ZNF594Q96JF6 807 aaPredicted RBP14.2□□□□□ -0.14
GGPS1-205ENST00000482013 TBC1D2Q9BYX2 928 aa14.2□□□□□ -0.14
GGPS1-205ENST00000482013 RIPOR2Q9Y4F9 1068 aa14.2□□□□□ -0.14
GGPS1-205ENST00000482013 RAD50Q92878 1312 aa14.19□□□□□ -0.14
GGPS1-205ENST00000482013 CCDC152Q4G0S7 254 aa14.19□□□□□ -0.14
GGPS1-205ENST00000482013 SLC10A5Q5PT55 438 aa14.19□□□□□ -0.14
GGPS1-205ENST00000482013 FAM182BQ5T319 152 aa14.19□□□□□ -0.14
GGPS1-205ENST00000482013 LDHAL6AQ6ZMR3 332 aa14.19□□□□□ -0.14
GGPS1-205ENST00000482013 HSCBQ8IWL3 235 aa14.19□□□□□ -0.14
GGPS1-205ENST00000482013 SYNE4Q8N205 404 aa14.19□□□□□ -0.14
GGPS1-205ENST00000482013 HAUS7Q99871 368 aa14.19□□□□□ -0.14
GGPS1-205ENST00000482013 PUS3Q9BZE2 481 aaKnown RBP14.19□□□□□ -0.14
GGPS1-205ENST00000482013 NYXQ9GZU5 481 aa14.19□□□□□ -0.14
GGPS1-205ENST00000482013 GREM2Q9H772 168 aa14.19□□□□□ -0.14
GGPS1-205ENST00000482013 DIAPH3Q9NSV4 1193 aa14.19□□□□□ -0.14
GGPS1-205ENST00000482013 TLR7Q9NYK1 1049 aaKnown RBP14.19□□□□□ -0.14
GGPS1-205ENST00000482013 ABCC12Q96J65 1359 aa14.19□□□□□ -0.14
GGPS1-205ENST00000482013 ZPR1O75312 459 aa14.18□□□□□ -0.14
GGPS1-205ENST00000482013 MAP4K4O95819 1239 aaPredicted RBP14.18□□□□□ -0.14
GGPS1-205ENST00000482013 DBNDD2Q9BQY9 259 aa14.18□□□□□ -0.14
GGPS1-205ENST00000482013 BOLA2Q9H3K6 86 aa14.18□□□□□ -0.14
GGPS1-205ENST00000482013 SNRKQ9NRH2 765 aa14.18□□□□□ -0.14
GGPS1-205ENST00000482013 LRP5O75197 1615 aa14.18□□□□□ -0.14
GGPS1-205ENST00000482013 COL24A1Q17RW2 1714 aa14.18□□□□□ -0.14
GGPS1-205ENST00000482013 MROH5Q6ZUA9 1318 aa14.17□□□□□ -0.14
GGPS1-205ENST00000482013 A0A1B0GUL7 405 aa14.17□□□□□ -0.14
GGPS1-205ENST00000482013 GNPATO15228 680 aa14.17□□□□□ -0.14
GGPS1-205ENST00000482013 KIAA1211Q6ZU35 1233 aa14.17□□□□□ -0.14
GGPS1-205ENST00000482013 NEUROD6Q96NK8 337 aa14.17□□□□□ -0.14
GGPS1-205ENST00000482013 TIMM10P62072 90 aa14.16□□□□□ -0.14
GGPS1-205ENST00000482013 SF3B3Q15393 1217 aaKnown RBP14.16□□□□□ -0.14
GGPS1-205ENST00000482013 CCDC158Q5M9N0 1113 aa14.16□□□□□ -0.14
GGPS1-205ENST00000482013 TRAPPC3LQ5T215 181 aa14.16□□□□□ -0.14
GGPS1-205ENST00000482013 BCL2L12Q9HB09 334 aa14.16□□□□□ -0.14
GGPS1-205ENST00000482013 ANO2Q9NQ90 1003 aa14.16□□□□□ -0.14
GGPS1-205ENST00000482013 CNNM1Q9NRU3 951 aa14.16□□□□□ -0.14
GGPS1-205ENST00000482013 UBR3Q6ZT12 1888 aa14.15□□□□□ -0.14
GGPS1-205ENST00000482013 HCLS1P14317 486 aaPredicted RBP14.15□□□□□ -0.14
GGPS1-205ENST00000482013 SLC4A3P48751 1232 aa14.15□□□□□ -0.14
GGPS1-205ENST00000482013 KCNQ4P56696 695 aa14.15□□□□□ -0.14
GGPS1-205ENST00000482013 METTL24Q5JXM2 366 aa14.15□□□□□ -0.14
GGPS1-205ENST00000482013 USPL1Q5W0Q7 1092 aa14.15□□□□□ -0.14
GGPS1-205ENST00000482013 ARHGEF1Q92888 912 aaKnown RBP14.15□□□□□ -0.14
GGPS1-205ENST00000482013 ZNF512BQ96KM6 892 aaPredicted RBP14.15□□□□□ -0.14
GGPS1-205ENST00000482013 SETDB2Q96T68 719 aa14.15□□□□□ -0.14
GGPS1-205ENST00000482013 FSD1Q9BTV5 496 aa14.15□□□□□ -0.14
GGPS1-205ENST00000482013 C4AP0C0L4 1744 aa14.15□□□□□ -0.14
GGPS1-205ENST00000482013 HSPA4P34932 840 aa14.14□□□□□ -0.15
GGPS1-205ENST00000482013 RFC4P35249 363 aa14.14□□□□□ -0.15
GGPS1-205ENST00000482013 LRRFIP1Q32MZ4 808 aaKnown RBP14.14□□□□□ -0.15
GGPS1-205ENST00000482013 TBC1D9BQ66K14 1250 aa14.14□□□□□ -0.15
GGPS1-205ENST00000482013 CWC27Q6UX04 472 aaKnown RBP14.14□□□□□ -0.15
GGPS1-205ENST00000482013 VGLL2Q8N8G2 317 aa14.14□□□□□ -0.15
GGPS1-205ENST00000482013 CDC5LQ99459 802 aaKnown RBP14.14□□□□□ -0.15
GGPS1-205ENST00000482013 LSG1Q9H089 658 aaKnown RBP14.14□□□□□ -0.15
GGPS1-205ENST00000482013 ARAP2Q8WZ64 1704 aa14.14□□□□□ -0.15
GGPS1-205ENST00000482013 RIC1Q4ADV7 1423 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms