RNA–Protein interactions for RNA: ENST00000481875.1

GARNL3-217, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 639 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-217ENST00000481875 KIAA2012Q0VF49 1180 aa15.05■□□□□ -0
GARNL3-217ENST00000481875 DEFB115Q30KQ5 88 aa15.05■□□□□ -0
GARNL3-217ENST00000481875 MAP1SQ66K74 1059 aaPredicted RBP15.05■□□□□ -0
GARNL3-217ENST00000481875 MIER1Q8N108 512 aa15.05■□□□□ -0
GARNL3-217ENST00000481875 PLBD2Q8NHP8 589 aa15.05■□□□□ -0
GARNL3-217ENST00000481875 CFAP44Q96MT7 982 aa15.05■□□□□ -0
GARNL3-217ENST00000481875 GPRC5DQ9NZD1 345 aa15.05■□□□□ -0
GARNL3-217ENST00000481875 TAF1P21675 1872 aa15.04■□□□□ -0
GARNL3-217ENST00000481875 DDX60Q8IY21 1712 aaKnown RBP15.04■□□□□ -0
GARNL3-217ENST00000481875 PPIP5K2O43314 1243 aa15.04■□□□□ -0
GARNL3-217ENST00000481875 CXCL9Q07325 125 aa15.04■□□□□ -0
GARNL3-217ENST00000481875 GRAPQ13588 217 aa15.04■□□□□ -0
GARNL3-217ENST00000481875 SF3B3Q15393 1217 aaKnown RBP15.04■□□□□ -0
GARNL3-217ENST00000481875 ANKRD13DQ6ZTN6 518 aa15.04■□□□□ -0
GARNL3-217ENST00000481875 DDX46Q7L014 1031 aaKnown RBP15.04■□□□□ -0
GARNL3-217ENST00000481875 GRAPLQ8TC17 118 aaPredicted RBP15.04■□□□□ -0
GARNL3-217ENST00000481875 ISCA1Q9BUE6 129 aa15.04■□□□□ -0
GARNL3-217ENST00000481875 RNF39Q9H2S5 420 aa15.04■□□□□ -0
GARNL3-217ENST00000481875 DBF4Q9UBU7 674 aaPredicted RBP15.04■□□□□ -0
GARNL3-217ENST00000481875 TRMT112Q9UI30 125 aaKnown RBP15.04■□□□□ -0
GARNL3-217ENST00000481875 GJA3Q9Y6H8 435 aa15.04■□□□□ -0
GARNL3-217ENST00000481875 THSD7BQ9C0I4 1608 aa15.03■□□□□ -0
GARNL3-217ENST00000481875 FOXN1O15353 648 aa15.03■□□□□ -0
GARNL3-217ENST00000481875 CTCFP49711 727 aaPredicted RBP15.03■□□□□ -0
GARNL3-217ENST00000481875 AOC3Q16853 763 aa15.03■□□□□ -0
GARNL3-217ENST00000481875 DPP8Q6V1X1 898 aaPredicted RBP15.03■□□□□ -0
GARNL3-217ENST00000481875 MPNDQ8N594 471 aa15.03■□□□□ -0
GARNL3-217ENST00000481875 ZC3H15Q8WU90 426 aaKnown RBP15.03■□□□□ -0
GARNL3-217ENST00000481875 ADARB2Q9NS39 739 aaKnown RBP15.03■□□□□ -0
GARNL3-217ENST00000481875 ZNF853P0CG23 659 aa15.02■□□□□ -0
GARNL3-217ENST00000481875 HCLS1P14317 486 aaPredicted RBP15.02■□□□□ -0
GARNL3-217ENST00000481875 MAP2K1Q02750 393 aaPredicted RBP15.02■□□□□ -0
GARNL3-217ENST00000481875 AIMP1Q12904 312 aaKnown RBP15.02■□□□□ -0
GARNL3-217ENST00000481875 SLC51AQ86UW1 340 aa15.02■□□□□ -0
GARNL3-217ENST00000481875 HYPKQ9NX55 129 aa15.02■□□□□ -0
GARNL3-217ENST00000481875 CHPF2Q9P2E5 772 aa15.02■□□□□ -0
GARNL3-217ENST00000481875 ADAMTS8Q9UP79 889 aa15.02■□□□□ -0
GARNL3-217ENST00000481875 WDR33Q9C0J8 1336 aaKnown RBP15.01□□□□□ -0.01
GARNL3-217ENST00000481875 TNIP1Q15025 636 aa15.01□□□□□ -0.01
GARNL3-217ENST00000481875 WDR43Q15061 677 aaKnown RBP eCLIP15.01□□□□□ -0.01
GARNL3-217ENST00000481875 KRT24Q2M2I5 525 aa15.01□□□□□ -0.01
GARNL3-217ENST00000481875 HDGFL1Q5TGJ6 251 aa15.01□□□□□ -0.01
GARNL3-217ENST00000481875 CST9Q5W186 159 aa15.01□□□□□ -0.01
GARNL3-217ENST00000481875 DUOX1Q9NRD9 1551 aa15.01□□□□□ -0.01
GARNL3-217ENST00000481875 TCERG1O14776 1098 aaKnown RBP15□□□□□ -0.01
GARNL3-217ENST00000481875 NEUROD2Q15784 382 aa15□□□□□ -0.01
GARNL3-217ENST00000481875 CCDC146Q8IYE0 955 aa15□□□□□ -0.01
GARNL3-217ENST00000481875 AIDAQ96BJ3 306 aa15□□□□□ -0.01
GARNL3-217ENST00000481875 HHIPL1Q96JK4 782 aa15□□□□□ -0.01
GARNL3-217ENST00000481875 MRS2Q9HD23 443 aa15□□□□□ -0.01
GARNL3-217ENST00000481875 ECE1P42892 770 aa14.99□□□□□ -0.01
GARNL3-217ENST00000481875 DUSP27Q5VZP5 1158 aa14.99□□□□□ -0.01
GARNL3-217ENST00000481875 CIAPIN1Q6FI81 312 aa14.99□□□□□ -0.01
GARNL3-217ENST00000481875 NECTIN2Q92692 538 aa14.99□□□□□ -0.01
GARNL3-217ENST00000481875 DPF2Q92785 391 aa14.99□□□□□ -0.01
GARNL3-217ENST00000481875 TLL2Q9Y6L7 1015 aa14.99□□□□□ -0.01
GARNL3-217ENST00000481875 CCER2I3L3R5 266 aa14.98□□□□□ -0.01
GARNL3-217ENST00000481875 GMPSP49915 693 aaPredicted RBP14.98□□□□□ -0.01
GARNL3-217ENST00000481875 CCDC184Q52MB2 194 aa14.98□□□□□ -0.01
GARNL3-217ENST00000481875 POTEDQ86YR6 584 aa14.98□□□□□ -0.01
GARNL3-217ENST00000481875 CHMP4AQ9BY43 222 aa14.98□□□□□ -0.01
GARNL3-217ENST00000481875 MBIPQ9NS73 344 aa14.98□□□□□ -0.01
GARNL3-217ENST00000481875 POLR2AP24928 1970 aaKnown RBP14.98□□□□□ -0.01
GARNL3-217ENST00000481875 YDJCA8MPS7 323 aa14.97□□□□□ -0.01
GARNL3-217ENST00000481875 HSP90B1P14625 803 aaKnown RBP14.97□□□□□ -0.01
GARNL3-217ENST00000481875 MAP2K2P36507 400 aa14.97□□□□□ -0.01
GARNL3-217ENST00000481875 CALD1Q05682 793 aaKnown RBP14.97□□□□□ -0.01
GARNL3-217ENST00000481875 C1QBPQ07021 282 aaKnown RBP14.97□□□□□ -0.01
GARNL3-217ENST00000481875 FAM89AQ96GI7 184 aa14.97□□□□□ -0.01
GARNL3-217ENST00000481875 IFT57Q9NWB7 429 aa14.97□□□□□ -0.01
GARNL3-217ENST00000481875 ABT1Q9ULW3 272 aaKnown RBP14.97□□□□□ -0.01
GARNL3-217ENST00000481875 GNAI1P63096 354 aa14.96□□□□□ -0.01
GARNL3-217ENST00000481875 SAPCD2Q86UD0 394 aa14.96□□□□□ -0.01
GARNL3-217ENST00000481875 CAPNS2Q96L46 248 aa14.96□□□□□ -0.01
GARNL3-217ENST00000481875 LAS1LQ9Y4W2 734 aaKnown RBP14.96□□□□□ -0.01
GARNL3-217ENST00000481875 CAPN15O75808 1086 aa14.95□□□□□ -0.02
GARNL3-217ENST00000481875 HSPA8P11142 646 aaKnown RBP14.95□□□□□ -0.02
GARNL3-217ENST00000481875 HIRAP54198 1017 aaPredicted RBP14.95□□□□□ -0.02
GARNL3-217ENST00000481875 RPS8P62241 208 aaKnown RBP14.95□□□□□ -0.02
GARNL3-217ENST00000481875 WASHC4Q2M389 1173 aa14.95□□□□□ -0.02
GARNL3-217ENST00000481875 CDC37L1Q7L3B6 337 aa14.95□□□□□ -0.02
GARNL3-217ENST00000481875 ZBTB38Q8NAP3 1195 aaPredicted RBP14.95□□□□□ -0.02
GARNL3-217ENST00000481875 CELF1Q92879 486 aaKnown RBP14.95□□□□□ -0.02
GARNL3-217ENST00000481875 GPR101Q96P66 508 aaPredicted RBP14.95□□□□□ -0.02
GARNL3-217ENST00000481875 PODXL2Q9NZ53 605 aa14.95□□□□□ -0.02
GARNL3-217ENST00000481875 CNOT7Q9UIV1 285 aaKnown RBP14.95□□□□□ -0.02
GARNL3-217ENST00000481875 ATP5J2-PTCD1G3V325 749 aa14.94□□□□□ -0.02
GARNL3-217ENST00000481875 H7C1D1 291 aa14.94□□□□□ -0.02
GARNL3-217ENST00000481875 TRAF5O00463 557 aa14.94□□□□□ -0.02
GARNL3-217ENST00000481875 IRS4O14654 1257 aaPredicted RBP14.94□□□□□ -0.02
GARNL3-217ENST00000481875 RAD17O75943 681 aa14.94□□□□□ -0.02
GARNL3-217ENST00000481875 RPS12P25398 132 aaKnown RBP14.94□□□□□ -0.02
GARNL3-217ENST00000481875 LBX1P52954 281 aa14.94□□□□□ -0.02
GARNL3-217ENST00000481875 FMR1Q06787 632 aaKnown RBP eCLIP14.94□□□□□ -0.02
GARNL3-217ENST00000481875 CCDC191Q8NCU4 936 aa14.94□□□□□ -0.02
GARNL3-217ENST00000481875 BCL2L13Q9BXK5 485 aa14.94□□□□□ -0.02
GARNL3-217ENST00000481875 POLLQ9UGP5 575 aa14.94□□□□□ -0.02
GARNL3-217ENST00000481875 ZNF609O15014 1411 aa14.93□□□□□ -0.02
GARNL3-217ENST00000481875 NSFL1CQ9UNZ2 370 aaKnown RBP14.93□□□□□ -0.02
GARNL3-217ENST00000481875 PSME4Q14997 1843 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms