RNA–Protein interactions for RNA: ENST00000481559.6

GRIA1-205, Transcript of glutamate ionotropic receptor AMPA type subunit 1, humanhuman

TSL 1 (best)

Gene GRIA1, Length 2,069 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA1-205ENST00000481559 PDZRN3Q9UPQ7 1066 aa12.91□□□□□ -0.34
GRIA1-205ENST00000481559 SH3TC1Q8TE82 1336 aa12.91□□□□□ -0.34
GRIA1-205ENST00000481559 SERPINB2P05120 415 aa12.9□□□□□ -0.34
GRIA1-205ENST00000481559 MMP10P09238 476 aa12.9□□□□□ -0.34
GRIA1-205ENST00000481559 PDE4AP27815 886 aa12.9□□□□□ -0.34
GRIA1-205ENST00000481559 LNPKQ9C0E8 428 aa12.9□□□□□ -0.34
GRIA1-205ENST00000481559 RWDD1Q9H446 243 aaPredicted RBP12.9□□□□□ -0.34
GRIA1-205ENST00000481559 RGS3P49796 1198 aa12.9□□□□□ -0.34
GRIA1-205ENST00000481559 LRRC24Q50LG9 513 aa12.9□□□□□ -0.34
GRIA1-205ENST00000481559 LAMB2P55268 1798 aa12.9□□□□□ -0.34
GRIA1-205ENST00000481559 WTIPA6NIX2 430 aaPredicted RBP12.89□□□□□ -0.35
GRIA1-205ENST00000481559 SURF6O75683 361 aaKnown RBP12.89□□□□□ -0.35
GRIA1-205ENST00000481559 CTSWP56202 376 aa12.89□□□□□ -0.35
GRIA1-205ENST00000481559 PTPN12Q05209 780 aaKnown RBP12.89□□□□□ -0.35
GRIA1-205ENST00000481559 PARP10Q53GL7 1025 aa12.89□□□□□ -0.35
GRIA1-205ENST00000481559 ANKRD45Q5TZF3 282 aa12.89□□□□□ -0.35
GRIA1-205ENST00000481559 CENPQQ7L2Z9 268 aaPredicted RBP12.89□□□□□ -0.35
GRIA1-205ENST00000481559 CCDC125Q86Z20 511 aa12.89□□□□□ -0.35
GRIA1-205ENST00000481559 SMC5Q8IY18 1101 aa12.89□□□□□ -0.35
GRIA1-205ENST00000481559 DCTPP1Q9H773 170 aa12.89□□□□□ -0.35
GRIA1-205ENST00000481559 IL1RAPL2Q9NP60 686 aa12.89□□□□□ -0.35
GRIA1-205ENST00000481559 GTF2E1P29083 439 aaPredicted RBP12.89□□□□□ -0.35
GRIA1-205ENST00000481559 MTX1Q13505 466 aa12.89□□□□□ -0.35
GRIA1-205ENST00000481559 TSHZ3Q63HK5 1081 aa12.89□□□□□ -0.35
GRIA1-205ENST00000481559 ATF5Q9Y2D1 282 aaPredicted RBP12.89□□□□□ -0.35
GRIA1-205ENST00000481559 MYH3P11055 1940 aa12.88□□□□□ -0.35
GRIA1-205ENST00000481559 CDHR2Q9BYE9 1310 aa12.88□□□□□ -0.35
GRIA1-205ENST00000481559 SPEF2Q9C093 1822 aa12.88□□□□□ -0.35
GRIA1-205ENST00000481559 SNAP23O00161 211 aa12.88□□□□□ -0.35
GRIA1-205ENST00000481559 ITGA6P23229 1130 aa12.88□□□□□ -0.35
GRIA1-205ENST00000481559 NPHP1O15259 732 aa12.87□□□□□ -0.35
GRIA1-205ENST00000481559 PDE8AO60658 829 aa12.87□□□□□ -0.35
GRIA1-205ENST00000481559 CSF1RP07333 972 aa12.87□□□□□ -0.35
GRIA1-205ENST00000481559 CHMP4BQ9H444 224 aaKnown RBP12.87□□□□□ -0.35
GRIA1-205ENST00000481559 WWC3Q9ULE0 1092 aa12.87□□□□□ -0.35
GRIA1-205ENST00000481559 SASH1O94885 1247 aa12.87□□□□□ -0.35
GRIA1-205ENST00000481559 AAMPQ13685 434 aa12.87□□□□□ -0.35
GRIA1-205ENST00000481559 CNBD1Q8NA66 436 aa12.87□□□□□ -0.35
GRIA1-205ENST00000481559 PLA2G12BQ9BX93 195 aa12.87□□□□□ -0.35
GRIA1-205ENST00000481559 ANKRD31Q8N7Z5 1873 aa12.87□□□□□ -0.35
GRIA1-205ENST00000481559 CELF1Q92879 486 aaKnown RBP12.86□□□□□ -0.35
GRIA1-205ENST00000481559 IBTKQ9P2D0 1353 aaPredicted RBP12.86□□□□□ -0.35
GRIA1-205ENST00000481559 QSER1Q2KHR3 1735 aa12.86□□□□□ -0.35
GRIA1-205ENST00000481559 TPTE2Q6XPS3 522 aa12.85□□□□□ -0.35
GRIA1-205ENST00000481559 NUCB1Q02818 461 aa12.85□□□□□ -0.35
GRIA1-205ENST00000481559 ATG9AQ7Z3C6 839 aa12.85□□□□□ -0.35
GRIA1-205ENST00000481559 NLGN1Q8N2Q7 840 aa12.85□□□□□ -0.35
GRIA1-205ENST00000481559 HELBQ8NG08 1087 aaPredicted RBP12.85□□□□□ -0.35
GRIA1-205ENST00000481559 TLR7Q9NYK1 1049 aaKnown RBP12.85□□□□□ -0.35
GRIA1-205ENST00000481559 OLFM4Q6UX06 510 aa12.84□□□□□ -0.35
GRIA1-205ENST00000481559 CHD1LQ86WJ1 897 aa12.84□□□□□ -0.35
GRIA1-205ENST00000481559 HMMRO75330 724 aa12.84□□□□□ -0.35
GRIA1-205ENST00000481559 TFCP2Q12800 502 aa12.84□□□□□ -0.35
GRIA1-205ENST00000481559 FLAD1Q8NFF5 587 aa12.84□□□□□ -0.35
GRIA1-205ENST00000481559 COL11A2P13942 1736 aaPredicted RBP12.83□□□□□ -0.36
GRIA1-205ENST00000481559 IFIT5Q13325 482 aaKnown RBP12.83□□□□□ -0.36
GRIA1-205ENST00000481559 OS9Q13438 667 aaPredicted RBP12.83□□□□□ -0.36
GRIA1-205ENST00000481559 CCDC57Q2TAC2 916 aa12.83□□□□□ -0.36
GRIA1-205ENST00000481559 SLC10A5Q5PT55 438 aa12.83□□□□□ -0.36
GRIA1-205ENST00000481559 RHPN1Q8TCX5 695 aa12.83□□□□□ -0.36
GRIA1-205ENST00000481559 NYXQ9GZU5 481 aa12.83□□□□□ -0.36
GRIA1-205ENST00000481559 NRXN2Q9P2S2 1712 aa12.83□□□□□ -0.36
GRIA1-205ENST00000481559 TAF5LO75529 589 aa12.82□□□□□ -0.36
GRIA1-205ENST00000481559 CHRNA5P30532 468 aa12.82□□□□□ -0.36
GRIA1-205ENST00000481559 GCC1Q96CN9 775 aa12.82□□□□□ -0.36
GRIA1-205ENST00000481559 COPRSQ9NQ92 184 aa12.82□□□□□ -0.36
GRIA1-205ENST00000481559 NOP58Q9Y2X3 529 aaKnown RBP12.82□□□□□ -0.36
GRIA1-205ENST00000481559 PARP3Q9Y6F1 533 aa12.82□□□□□ -0.36
GRIA1-205ENST00000481559 CCDC8Q9H0W5 538 aaPredicted RBP12.82□□□□□ -0.36
GRIA1-205ENST00000481559 RGL2O15211 777 aa12.81□□□□□ -0.36
GRIA1-205ENST00000481559 EAF2Q96CJ1 260 aaPredicted RBP12.81□□□□□ -0.36
GRIA1-205ENST00000481559 NLRP3Q96P20 1036 aa12.81□□□□□ -0.36
GRIA1-205ENST00000481559 RIC1Q4ADV7 1423 aa12.81□□□□□ -0.36
GRIA1-205ENST00000481559 ANKRD18BA2A2Z9 1011 aa12.81□□□□□ -0.36
GRIA1-205ENST00000481559 SF3B3Q15393 1217 aaKnown RBP12.81□□□□□ -0.36
GRIA1-205ENST00000481559 TAF7LQ5H9L4 462 aa12.81□□□□□ -0.36
GRIA1-205ENST00000481559 LDHAL6AQ6ZMR3 332 aa12.81□□□□□ -0.36
GRIA1-205ENST00000481559 LRRCC1Q9C099 1032 aa12.81□□□□□ -0.36
GRIA1-205ENST00000481559 NDUFB9Q9Y6M9 179 aa12.81□□□□□ -0.36
GRIA1-205ENST00000481559 CACNA1SQ13698 1873 aa12.8□□□□□ -0.36
GRIA1-205ENST00000481559 EYA2O00167 538 aa12.8□□□□□ -0.36
GRIA1-205ENST00000481559 TIMM10P62072 90 aa12.8□□□□□ -0.36
GRIA1-205ENST00000481559 ST5P78524 1137 aa12.8□□□□□ -0.36
GRIA1-205ENST00000481559 G3BP1Q13283 466 aaKnown RBP eCLIP12.8□□□□□ -0.36
GRIA1-205ENST00000481559 CCDC152Q4G0S7 254 aa12.8□□□□□ -0.36
GRIA1-205ENST00000481559 RIPOR2Q9Y4F9 1068 aa12.8□□□□□ -0.36
GRIA1-205ENST00000481559 GPR101Q96P66 508 aaPredicted RBP12.79□□□□□ -0.36
GRIA1-205ENST00000481559 MAP4K4O95819 1239 aaPredicted RBP12.79□□□□□ -0.36
GRIA1-205ENST00000481559 ADORA1P30542 326 aa12.79□□□□□ -0.36
GRIA1-205ENST00000481559 PLEKHM2Q8IWE5 1019 aa12.79□□□□□ -0.36
GRIA1-205ENST00000481559 KLHL34Q8N239 644 aa12.79□□□□□ -0.36
GRIA1-205ENST00000481559 CNNM1Q9NRU3 951 aa12.79□□□□□ -0.36
GRIA1-205ENST00000481559 ZNF219Q9P2Y4 722 aaPredicted RBP12.79□□□□□ -0.36
GRIA1-205ENST00000481559 PPP1R1BQ9UD71 204 aaPredicted RBP12.79□□□□□ -0.36
GRIA1-205ENST00000481559 LRP5O75197 1615 aa12.79□□□□□ -0.36
GRIA1-205ENST00000481559 KLRK1P26718 216 aa12.78□□□□□ -0.36
GRIA1-205ENST00000481559 AACSQ86V21 672 aa12.78□□□□□ -0.36
GRIA1-205ENST00000481559 SALL3Q9BXA9 1300 aa12.78□□□□□ -0.36
GRIA1-205ENST00000481559 PTGER2P43116 358 aa12.77□□□□□ -0.36
GRIA1-205ENST00000481559 CRY2Q49AN0 593 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms