RNA–Protein interactions for RNA: ENST00000481231.5

SMARCE1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 695 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-210ENST00000481231 TBC1D10BQ4KMP7 808 aaPredicted RBP12.56□□□□□ -0.4
SMARCE1-210ENST00000481231 RASAL3Q86YV0 1011 aa12.56□□□□□ -0.4
SMARCE1-210ENST00000481231 RTF1Q92541 710 aaKnown RBP12.56□□□□□ -0.4
SMARCE1-210ENST00000481231 CRAMP1Q96RY5 1269 aa12.56□□□□□ -0.4
SMARCE1-210ENST00000481231 NYXQ9GZU5 481 aa12.56□□□□□ -0.4
SMARCE1-210ENST00000481231 NUDCQ9Y266 331 aa12.56□□□□□ -0.4
SMARCE1-210ENST00000481231 ZBTB12Q9Y330 459 aaPredicted RBP12.56□□□□□ -0.4
SMARCE1-210ENST00000481231 UBN2Q6ZU65 1347 aa12.56□□□□□ -0.4
SMARCE1-210ENST00000481231 H7C1D1 291 aa12.55□□□□□ -0.4
SMARCE1-210ENST00000481231 RGL2O15211 777 aa12.55□□□□□ -0.4
SMARCE1-210ENST00000481231 SNRPA1P09661 255 aaKnown RBP12.55□□□□□ -0.4
SMARCE1-210ENST00000481231 DCTN1Q14203 1278 aa12.55□□□□□ -0.4
SMARCE1-210ENST00000481231 ATP6V0A2Q9Y487 856 aa12.55□□□□□ -0.4
SMARCE1-210ENST00000481231 KIAA2012Q0VF49 1180 aa12.54□□□□□ -0.4
SMARCE1-210ENST00000481231 TNIP1Q15025 636 aa12.54□□□□□ -0.4
SMARCE1-210ENST00000481231 NGEFQ8N5V2 710 aa12.54□□□□□ -0.4
SMARCE1-210ENST00000481231 RTFDC1Q9BY42 306 aaPredicted RBP12.54□□□□□ -0.4
SMARCE1-210ENST00000481231 VPS33BQ9H267 617 aa12.54□□□□□ -0.4
SMARCE1-210ENST00000481231 AKAP11Q9UKA4 1901 aa12.54□□□□□ -0.4
SMARCE1-210ENST00000481231 HTTP42858 3142 aa12.54□□□□□ -0.4
SMARCE1-210ENST00000481231 POTEFA5A3E0 1075 aa12.53□□□□□ -0.4
SMARCE1-210ENST00000481231 RBM26Q5T8P6 1007 aaKnown RBP12.53□□□□□ -0.4
SMARCE1-210ENST00000481231 SUSD4Q5VX71 490 aa12.53□□□□□ -0.4
SMARCE1-210ENST00000481231 FBXO46Q6PJ61 603 aaPredicted RBP12.53□□□□□ -0.4
SMARCE1-210ENST00000481231 DPP8Q6V1X1 898 aaPredicted RBP12.53□□□□□ -0.4
SMARCE1-210ENST00000481231 SUPT20HQ8NEM7 779 aa12.53□□□□□ -0.4
SMARCE1-210ENST00000481231 DCPSQ96C86 337 aaKnown RBP12.53□□□□□ -0.4
SMARCE1-210ENST00000481231 TMX4Q9H1E5 349 aaPredicted RBP12.53□□□□□ -0.4
SMARCE1-210ENST00000481231 SZT2Q5T011 3432 aa12.52□□□□□ -0.4
SMARCE1-210ENST00000481231 HTATSF1O43719 755 aaKnown RBP12.52□□□□□ -0.41
SMARCE1-210ENST00000481231 ABCC4O15439 1325 aa12.52□□□□□ -0.41
SMARCE1-210ENST00000481231 ASTN2O75129 1339 aaPredicted RBP12.52□□□□□ -0.41
SMARCE1-210ENST00000481231 PSMD14O00487 310 aa12.51□□□□□ -0.41
SMARCE1-210ENST00000481231 DLL1O00548 723 aa12.51□□□□□ -0.41
SMARCE1-210ENST00000481231 NTSR2O95665 410 aa12.51□□□□□ -0.41
SMARCE1-210ENST00000481231 TAF7Q15545 349 aaPredicted RBP12.51□□□□□ -0.41
SMARCE1-210ENST00000481231 TTLL7Q6ZT98 887 aa12.51□□□□□ -0.41
SMARCE1-210ENST00000481231 CDCA5Q96FF9 252 aa12.51□□□□□ -0.41
SMARCE1-210ENST00000481231 MIS18AQ9NYP9 233 aa12.51□□□□□ -0.41
SMARCE1-210ENST00000481231 GGA3Q9NZ52 723 aa12.51□□□□□ -0.41
SMARCE1-210ENST00000481231 COLQQ9Y215 455 aaPredicted RBP12.51□□□□□ -0.41
SMARCE1-210ENST00000481231 IBTKQ9P2D0 1353 aaPredicted RBP12.51□□□□□ -0.41
SMARCE1-210ENST00000481231 BRCA2P51587 3418 aa12.5□□□□□ -0.41
SMARCE1-210ENST00000481231 GPR25O00155 361 aa12.5□□□□□ -0.41
SMARCE1-210ENST00000481231 MPNDQ8N594 471 aa12.5□□□□□ -0.41
SMARCE1-210ENST00000481231 ZBTB3Q9H5J0 574 aa12.5□□□□□ -0.41
SMARCE1-210ENST00000481231 MAP3K15Q6ZN16 1313 aa12.5□□□□□ -0.41
SMARCE1-210ENST00000481231 DUOX1Q9NRD9 1551 aa12.5□□□□□ -0.41
SMARCE1-210ENST00000481231 MOB2Q70IA6 237 aa12.49□□□□□ -0.41
SMARCE1-210ENST00000481231 SULF1Q8IWU6 871 aa12.49□□□□□ -0.41
SMARCE1-210ENST00000481231 REM2Q8IYK8 340 aaPredicted RBP12.49□□□□□ -0.41
SMARCE1-210ENST00000481231 DPF2Q92785 391 aa12.49□□□□□ -0.41
SMARCE1-210ENST00000481231 ERVV-1B6SEH8 477 aa12.48□□□□□ -0.41
SMARCE1-210ENST00000481231 KIF4BQ2VIQ3 1234 aa12.48□□□□□ -0.41
SMARCE1-210ENST00000481231 NLRP3Q96P20 1036 aa12.48□□□□□ -0.41
SMARCE1-210ENST00000481231 R3HDMLQ9H3Y0 253 aa12.48□□□□□ -0.41
SMARCE1-210ENST00000481231 DBNDD1Q9H9R9 158 aa12.48□□□□□ -0.41
SMARCE1-210ENST00000481231 KCNQ5Q9NR82 932 aa12.48□□□□□ -0.41
SMARCE1-210ENST00000481231 CENPFP49454 3210 aa12.48□□□□□ -0.41
SMARCE1-210ENST00000481231 MKRN3Q13064 507 aaKnown RBP12.47□□□□□ -0.41
SMARCE1-210ENST00000481231 KIF6Q6ZMV9 814 aa12.47□□□□□ -0.41
SMARCE1-210ENST00000481231 SP8Q8IXZ3 490 aa12.47□□□□□ -0.41
SMARCE1-210ENST00000481231 NUP98P52948 1817 aa12.46□□□□□ -0.41
SMARCE1-210ENST00000481231 RTL9Q8NET4 1388 aa12.46□□□□□ -0.41
SMARCE1-210ENST00000481231 FKTNO75072 461 aa12.46□□□□□ -0.41
SMARCE1-210ENST00000481231 MYL6BP14649 208 aa12.46□□□□□ -0.41
SMARCE1-210ENST00000481231 ZNF34Q8IZ26 560 aa12.46□□□□□ -0.41
SMARCE1-210ENST00000481231 THUMPD2Q9BTF0 503 aaKnown RBP12.46□□□□□ -0.41
SMARCE1-210ENST00000481231 SCAF8Q9UPN6 1271 aaKnown RBP12.46□□□□□ -0.41
SMARCE1-210ENST00000481231 RRP7AQ9Y3A4 280 aaKnown RBP12.46□□□□□ -0.41
SMARCE1-210ENST00000481231 LAMB4A4D0S4 1761 aa12.46□□□□□ -0.42
SMARCE1-210ENST00000481231 PAPPA2Q9BXP8 1791 aa12.46□□□□□ -0.42
SMARCE1-210ENST00000481231 UBE2Q2LH0YL09 131 aa12.45□□□□□ -0.42
SMARCE1-210ENST00000481231 RIMBP2O15034 1052 aa12.45□□□□□ -0.42
SMARCE1-210ENST00000481231 EN2P19622 333 aaPredicted RBP12.45□□□□□ -0.42
SMARCE1-210ENST00000481231 EIF4A1P60842 406 aaKnown RBP12.45□□□□□ -0.42
SMARCE1-210ENST00000481231 NFE2L2Q16236 605 aa12.45□□□□□ -0.42
SMARCE1-210ENST00000481231 ANGEL2Q5VTE6 544 aaKnown RBP12.45□□□□□ -0.42
SMARCE1-210ENST00000481231 PNISRQ8TF01 805 aaKnown RBP12.45□□□□□ -0.42
SMARCE1-210ENST00000481231 PLEKHF1Q96S99 279 aa12.45□□□□□ -0.42
SMARCE1-210ENST00000481231 POLR2AP24928 1970 aaKnown RBP12.44□□□□□ -0.42
SMARCE1-210ENST00000481231 BBOX1O75936 387 aa12.44□□□□□ -0.42
SMARCE1-210ENST00000481231 NEFMP07197 916 aa12.44□□□□□ -0.42
SMARCE1-210ENST00000481231 HCLS1P14317 486 aaPredicted RBP12.44□□□□□ -0.42
SMARCE1-210ENST00000481231 RPS12P25398 132 aaKnown RBP12.44□□□□□ -0.42
SMARCE1-210ENST00000481231 DOK7Q18PE1 504 aa12.44□□□□□ -0.42
SMARCE1-210ENST00000481231 NOM1Q5C9Z4 860 aaKnown RBP12.44□□□□□ -0.42
SMARCE1-210ENST00000481231 PPP1R42Q7Z4L9 355 aa12.44□□□□□ -0.42
SMARCE1-210ENST00000481231 SLC17A8Q8NDX2 589 aa12.44□□□□□ -0.42
SMARCE1-210ENST00000481231 TRIM17Q9Y577 477 aa12.44□□□□□ -0.42
SMARCE1-210ENST00000481231 ECE2O60344 883 aa12.43□□□□□ -0.42
SMARCE1-210ENST00000481231 TM4SF4P48230 202 aa12.43□□□□□ -0.42
SMARCE1-210ENST00000481231 FKBP1BP68106 108 aa12.43□□□□□ -0.42
SMARCE1-210ENST00000481231 GRAPQ13588 217 aa12.43□□□□□ -0.42
SMARCE1-210ENST00000481231 WASHC4Q2M389 1173 aa12.43□□□□□ -0.42
SMARCE1-210ENST00000481231 PRAMEF18Q5VWM3 479 aa12.43□□□□□ -0.42
SMARCE1-210ENST00000481231 GRAPLQ8TC17 118 aaPredicted RBP12.43□□□□□ -0.42
SMARCE1-210ENST00000481231 TRIOBPQ9H2D6 2365 aa12.43□□□□□ -0.42
SMARCE1-210ENST00000481231 SCARF1Q14162 830 aa12.42□□□□□ -0.42
SMARCE1-210ENST00000481231 SLC10A5Q5PT55 438 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 130.3 ms