RNA–Protein interactions for RNA: ENST00000480495.1

TDP2-205, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

TSL 1 (best)

Gene TDP2, Length 714 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-205ENST00000480495 SUPT20HQ8NEM7 779 aa19.27■□□□□ 0.68
TDP2-205ENST00000480495 MYH16Q9H6N6 1097 aa19.27■□□□□ 0.68
TDP2-205ENST00000480495 NEXNQ0ZGT2 675 aa19.26■□□□□ 0.67
TDP2-205ENST00000480495 LARGE2Q8N3Y3 721 aa19.26■□□□□ 0.67
TDP2-205ENST00000480495 RTFDC1Q9BY42 306 aaPredicted RBP19.26■□□□□ 0.67
TDP2-205ENST00000480495 ZNF541Q9H0D2 1346 aa19.25■□□□□ 0.67
TDP2-205ENST00000480495 DDX60Q8IY21 1712 aaKnown RBP19.25■□□□□ 0.67
TDP2-205ENST00000480495 VAMP4O75379 141 aa19.25■□□□□ 0.67
TDP2-205ENST00000480495 EXOSC9Q06265 439 aaKnown RBP19.25■□□□□ 0.67
TDP2-205ENST00000480495 DPP8Q6V1X1 898 aaPredicted RBP19.25■□□□□ 0.67
TDP2-205ENST00000480495 SLC51AQ86UW1 340 aa19.25■□□□□ 0.67
TDP2-205ENST00000480495 EIF6P56537 245 aaKnown RBP19.24■□□□□ 0.67
TDP2-205ENST00000480495 G2E3Q7L622 706 aa19.24■□□□□ 0.67
TDP2-205ENST00000480495 GPC2Q8N158 579 aa19.24■□□□□ 0.67
TDP2-205ENST00000480495 MPNDQ8N594 471 aa19.24■□□□□ 0.67
TDP2-205ENST00000480495 SPINK5Q9NQ38 1064 aaPredicted RBP19.24■□□□□ 0.67
TDP2-205ENST00000480495 PPIP5K2O43314 1243 aa19.23■□□□□ 0.67
TDP2-205ENST00000480495 PDE8AO60658 829 aa19.23■□□□□ 0.67
TDP2-205ENST00000480495 IGKV5-2P06315 115 aa19.23■□□□□ 0.67
TDP2-205ENST00000480495 FLIIQ13045 1269 aa19.23■□□□□ 0.67
TDP2-205ENST00000480495 NIM1KQ8IY84 436 aa19.23■□□□□ 0.67
TDP2-205ENST00000480495 CCDC152Q4G0S7 254 aa19.22■□□□□ 0.67
TDP2-205ENST00000480495 CELF1Q92879 486 aaKnown RBP19.22■□□□□ 0.67
TDP2-205ENST00000480495 ZNF521Q96K83 1311 aa19.22■□□□□ 0.67
TDP2-205ENST00000480495 CDHR2Q9BYE9 1310 aa19.22■□□□□ 0.67
TDP2-205ENST00000480495 RPS8P62241 208 aaKnown RBP19.21■□□□□ 0.67
TDP2-205ENST00000480495 AOC3Q16853 763 aa19.21■□□□□ 0.67
TDP2-205ENST00000480495 TAF1DQ9H5J8 278 aaPredicted RBP19.21■□□□□ 0.67
TDP2-205ENST00000480495 HACL1Q9UJ83 578 aa19.21■□□□□ 0.67
TDP2-205ENST00000480495 COL4A5P29400 1685 aa19.2■□□□□ 0.66
TDP2-205ENST00000480495 CEP350Q5VT06 3117 aa19.2■□□□□ 0.66
TDP2-205ENST00000480495 NEURL1BA8MQ27 555 aa19.2■□□□□ 0.66
TDP2-205ENST00000480495 KIAA2012Q0VF49 1180 aa19.2■□□□□ 0.66
TDP2-205ENST00000480495 FKBP5Q13451 457 aaPredicted RBP19.2■□□□□ 0.66
TDP2-205ENST00000480495 SCN4AP35499 1836 aa19.19■□□□□ 0.66
TDP2-205ENST00000480495 CHADLQ6NUI6 762 aa19.19■□□□□ 0.66
TDP2-205ENST00000480495 DNAAF4Q8WXU2 420 aa19.19■□□□□ 0.66
TDP2-205ENST00000480495 JARID2Q92833 1246 aaPredicted RBP19.19■□□□□ 0.66
TDP2-205ENST00000480495 ZNRF3Q9ULT6 936 aa19.19■□□□□ 0.66
TDP2-205ENST00000480495 CCER2I3L3R5 266 aa19.18■□□□□ 0.66
TDP2-205ENST00000480495 CWF19L2Q2TBE0 894 aaKnown RBP19.18■□□□□ 0.66
TDP2-205ENST00000480495 PNMA8AQ86V59 439 aaPredicted RBP19.18■□□□□ 0.66
TDP2-205ENST00000480495 LDHDQ86WU2 507 aa19.18■□□□□ 0.66
TDP2-205ENST00000480495 GJA3Q9Y6H8 435 aa19.18■□□□□ 0.66
TDP2-205ENST00000480495 LRRC37AA6NMS7 1700 aa19.17■□□□□ 0.66
TDP2-205ENST00000480495 EPHX2P34913 555 aa19.17■□□□□ 0.66
TDP2-205ENST00000480495 LINS1Q8NG48 757 aa19.17■□□□□ 0.66
TDP2-205ENST00000480495 SEC31BQ9NQW1 1179 aa19.17■□□□□ 0.66
TDP2-205ENST00000480495 NSFL1CQ9UNZ2 370 aaKnown RBP19.17■□□□□ 0.66
TDP2-205ENST00000480495 CACNA1FO60840 1977 aa19.16■□□□□ 0.66
TDP2-205ENST00000480495 H7C1W4 665 aa19.16■□□□□ 0.66
TDP2-205ENST00000480495 POTEIP0CG38 1075 aa19.16■□□□□ 0.66
TDP2-205ENST00000480495 POTEJP0CG39 1038 aa19.16■□□□□ 0.66
TDP2-205ENST00000480495 LMOD1P29536 600 aaPredicted RBP19.16■□□□□ 0.66
TDP2-205ENST00000480495 CTSWP56202 376 aa19.16■□□□□ 0.66
TDP2-205ENST00000480495 GCKRQ14397 625 aa19.16■□□□□ 0.66
TDP2-205ENST00000480495 DNAJC5GQ8N7S2 189 aa19.16■□□□□ 0.66
TDP2-205ENST00000480495 TAF1P21675 1872 aa19.16■□□□□ 0.66
TDP2-205ENST00000480495 E9PSI1 815 aa19.15■□□□□ 0.66
TDP2-205ENST00000480495 GPSM2P81274 684 aa19.15■□□□□ 0.66
TDP2-205ENST00000480495 WASHC4Q2M389 1173 aa19.15■□□□□ 0.66
TDP2-205ENST00000480495 EAPPQ56P03 285 aaPredicted RBP19.15■□□□□ 0.66
TDP2-205ENST00000480495 EYA3Q99504 573 aa19.15■□□□□ 0.66
TDP2-205ENST00000480495 C6orf229H3BNL8 230 aa19.14■□□□□ 0.65
TDP2-205ENST00000480495 CXCL9Q07325 125 aa19.14■□□□□ 0.65
TDP2-205ENST00000480495 UBE3BQ7Z3V4 1068 aa19.14■□□□□ 0.65
TDP2-205ENST00000480495 ANKRD18AQ8IVF6 992 aa19.14■□□□□ 0.65
TDP2-205ENST00000480495 TTLL11Q8NHH1 800 aa19.14■□□□□ 0.65
TDP2-205ENST00000480495 CDC5LQ99459 802 aaKnown RBP19.14■□□□□ 0.65
TDP2-205ENST00000480495 PODXL2Q9NZ53 605 aa19.14■□□□□ 0.65
TDP2-205ENST00000480495 DUOX1Q9NRD9 1551 aa19.14■□□□□ 0.65
TDP2-205ENST00000480495 SCNN1DP51172 638 aa19.13■□□□□ 0.65
TDP2-205ENST00000480495 TNIP1Q15025 636 aa19.13■□□□□ 0.65
TDP2-205ENST00000480495 CIAPIN1Q6FI81 312 aa19.13■□□□□ 0.65
TDP2-205ENST00000480495 CCDC85AQ96PX6 553 aaPredicted RBP19.13■□□□□ 0.65
TDP2-205ENST00000480495 PLA2G12BQ9BX93 195 aa19.13■□□□□ 0.65
TDP2-205ENST00000480495 POLLQ9UGP5 575 aa19.13■□□□□ 0.65
TDP2-205ENST00000480495 RTL9Q8NET4 1388 aa19.13■□□□□ 0.65
TDP2-205ENST00000480495 COL4A1P02462 1669 aa19.12■□□□□ 0.65
TDP2-205ENST00000480495 HTRA3P83110 453 aa19.12■□□□□ 0.65
TDP2-205ENST00000480495 TBC1D16Q8TBP0 767 aa19.12■□□□□ 0.65
TDP2-205ENST00000480495 CLEC11AQ9Y240 323 aa19.12■□□□□ 0.65
TDP2-205ENST00000480495 CASP7P55210 303 aa19.11■□□□□ 0.65
TDP2-205ENST00000480495 ANKIB1Q9P2G1 1089 aa19.11■□□□□ 0.65
TDP2-205ENST00000480495 F6X3S4 739 aa19.1■□□□□ 0.65
TDP2-205ENST00000480495 EPS15P42566 896 aa19.1■□□□□ 0.65
TDP2-205ENST00000480495 SLFN5Q08AF3 891 aa19.1■□□□□ 0.65
TDP2-205ENST00000480495 BEND3Q5T5X7 828 aa19.1■□□□□ 0.65
TDP2-205ENST00000480495 USP50Q70EL3 339 aaPredicted RBP19.1■□□□□ 0.65
TDP2-205ENST00000480495 KLRG1Q96E93 195 aa19.1■□□□□ 0.65
TDP2-205ENST00000480495 GREM2Q9H772 168 aa19.1■□□□□ 0.65
TDP2-205ENST00000480495 GPRC5DQ9NZD1 345 aa19.1■□□□□ 0.65
TDP2-205ENST00000480495 GGA1Q9UJY5 639 aa19.1■□□□□ 0.65
TDP2-205ENST00000480495 XDHP47989 1333 aa19.09■□□□□ 0.65
TDP2-205ENST00000480495 YDJCA8MPS7 323 aa19.09■□□□□ 0.65
TDP2-205ENST00000480495 RIMBP2O15034 1052 aa19.09■□□□□ 0.65
TDP2-205ENST00000480495 RAD17O75943 681 aa19.09■□□□□ 0.65
TDP2-205ENST00000480495 UFL1O94874 794 aa19.09■□□□□ 0.65
TDP2-205ENST00000480495 ZC3H12CQ9C0D7 883 aaKnown RBP19.09■□□□□ 0.65
TDP2-205ENST00000480495 BSDC1Q9NW68 430 aaPredicted RBP19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms