RNA–Protein interactions for RNA: ENST00000480127.1

COL17A1-205, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 3

Gene COL17A1, Length 420 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-205ENST00000480127 CIAPIN1Q6FI81 312 aa9.28□□□□□ -0.92
COL17A1-205ENST00000480127 SP8Q8IXZ3 490 aa9.28□□□□□ -0.92
COL17A1-205ENST00000480127 TRPM4Q8TD43 1214 aa9.28□□□□□ -0.92
COL17A1-205ENST00000480127 ZC3H15Q8WU90 426 aaKnown RBP9.28□□□□□ -0.92
COL17A1-205ENST00000480127 THUMPD2Q9BTF0 503 aaKnown RBP9.28□□□□□ -0.92
COL17A1-205ENST00000480127 ZNF408Q9H9D4 720 aa9.28□□□□□ -0.92
COL17A1-205ENST00000480127 TSPYL4Q9UJ04 414 aa9.28□□□□□ -0.92
COL17A1-205ENST00000480127 LAS1LQ9Y4W2 734 aaKnown RBP9.28□□□□□ -0.92
COL17A1-205ENST00000480127 ERBB4Q15303 1308 aa9.28□□□□□ -0.92
COL17A1-205ENST00000480127 YDJCA8MPS7 323 aa9.27□□□□□ -0.93
COL17A1-205ENST00000480127 BBOX1O75936 387 aa9.27□□□□□ -0.93
COL17A1-205ENST00000480127 RAD17O75943 681 aa9.27□□□□□ -0.93
COL17A1-205ENST00000480127 DGKZQ13574 1117 aa9.27□□□□□ -0.93
COL17A1-205ENST00000480127 PDIA6Q15084 440 aa9.27□□□□□ -0.93
COL17A1-205ENST00000480127 RALBP1Q15311 655 aa9.27□□□□□ -0.93
COL17A1-205ENST00000480127 NFE2L2Q16236 605 aa9.27□□□□□ -0.93
COL17A1-205ENST00000480127 DLK2Q6UY11 383 aa9.27□□□□□ -0.93
COL17A1-205ENST00000480127 DPP8Q6V1X1 898 aaPredicted RBP9.27□□□□□ -0.93
COL17A1-205ENST00000480127 CDC37L1Q7L3B6 337 aa9.27□□□□□ -0.93
COL17A1-205ENST00000480127 MPNDQ8N594 471 aa9.27□□□□□ -0.93
COL17A1-205ENST00000480127 CFAP44Q96MT7 982 aa9.27□□□□□ -0.93
COL17A1-205ENST00000480127 PLEKHF1Q96S99 279 aa9.27□□□□□ -0.93
COL17A1-205ENST00000480127 UTP14AQ9BVJ6 771 aaKnown RBP9.27□□□□□ -0.93
COL17A1-205ENST00000480127 PCDH10Q9P2E7 1040 aa9.27□□□□□ -0.93
COL17A1-205ENST00000480127 CNOT7Q9UIV1 285 aaKnown RBP9.27□□□□□ -0.93
COL17A1-205ENST00000480127 EIF2S2P20042 333 aaKnown RBP9.26□□□□□ -0.93
COL17A1-205ENST00000480127 RIPK4P57078 832 aa9.26□□□□□ -0.93
COL17A1-205ENST00000480127 NOGQ13253 232 aa9.26□□□□□ -0.93
COL17A1-205ENST00000480127 TNIP1Q15025 636 aa9.26□□□□□ -0.93
COL17A1-205ENST00000480127 USP48Q86UV5 1035 aa9.26□□□□□ -0.93
COL17A1-205ENST00000480127 BCL2L13Q9BXK5 485 aa9.26□□□□□ -0.93
COL17A1-205ENST00000480127 DLG5Q8TDM6 1919 aa9.25□□□□□ -0.93
COL17A1-205ENST00000480127 DUOX1Q9NRD9 1551 aa9.25□□□□□ -0.93
COL17A1-205ENST00000480127 CASP8AP2Q9UKL3 1982 aa9.25□□□□□ -0.93
COL17A1-205ENST00000480127 FAM155AB1AL88 458 aaPredicted RBP9.25□□□□□ -0.93
COL17A1-205ENST00000480127 ANXA1P04083 346 aa9.25□□□□□ -0.93
COL17A1-205ENST00000480127 HCLS1P14317 486 aaPredicted RBP9.25□□□□□ -0.93
COL17A1-205ENST00000480127 HUNKP57058 714 aa9.25□□□□□ -0.93
COL17A1-205ENST00000480127 PROSER3Q2NL68 480 aa9.25□□□□□ -0.93
COL17A1-205ENST00000480127 MICALL2Q8IY33 904 aa9.25□□□□□ -0.93
COL17A1-205ENST00000480127 ZBTB12Q9Y330 459 aaPredicted RBP9.25□□□□□ -0.93
COL17A1-205ENST00000480127 H7C1D1 291 aa9.24□□□□□ -0.93
COL17A1-205ENST00000480127 EGFRP00533 1210 aa9.24□□□□□ -0.93
COL17A1-205ENST00000480127 GRAPQ13588 217 aa9.24□□□□□ -0.93
COL17A1-205ENST00000480127 RGMBQ6NW40 437 aa9.24□□□□□ -0.93
COL17A1-205ENST00000480127 SAMD7Q7Z3H4 446 aa9.24□□□□□ -0.93
COL17A1-205ENST00000480127 NLRP10Q86W26 655 aa9.24□□□□□ -0.93
COL17A1-205ENST00000480127 GRAPLQ8TC17 118 aaPredicted RBP9.24□□□□□ -0.93
COL17A1-205ENST00000480127 NECTIN2Q92692 538 aa9.24□□□□□ -0.93
COL17A1-205ENST00000480127 DPF2Q92785 391 aa9.24□□□□□ -0.93
COL17A1-205ENST00000480127 LAMB2P55268 1798 aa9.24□□□□□ -0.93
COL17A1-205ENST00000480127 ANKRD36CQ5JPF3 1778 aa9.23□□□□□ -0.93
COL17A1-205ENST00000480127 PSMD14O00487 310 aa9.23□□□□□ -0.93
COL17A1-205ENST00000480127 KIF23Q02241 960 aaPredicted RBP9.23□□□□□ -0.93
COL17A1-205ENST00000480127 DDX46Q7L014 1031 aaKnown RBP9.23□□□□□ -0.93
COL17A1-205ENST00000480127 COPS6Q7L5N1 327 aa9.23□□□□□ -0.93
COL17A1-205ENST00000480127 CCDC146Q8IYE0 955 aa9.23□□□□□ -0.93
COL17A1-205ENST00000480127 SAGE1Q9NXZ1 904 aa9.23□□□□□ -0.93
COL17A1-205ENST00000480127 MYBBP1AQ9BQG0 1328 aaKnown RBP9.23□□□□□ -0.93
COL17A1-205ENST00000480127 ADM5C9JUS6 153 aa9.22□□□□□ -0.93
COL17A1-205ENST00000480127 AIMP1Q12904 312 aaKnown RBP9.22□□□□□ -0.93
COL17A1-205ENST00000480127 TCIRG1Q13488 830 aa9.22□□□□□ -0.93
COL17A1-205ENST00000480127 WASHC4Q2M389 1173 aa9.22□□□□□ -0.93
COL17A1-205ENST00000480127 TBC1D10BQ4KMP7 808 aaPredicted RBP9.22□□□□□ -0.93
COL17A1-205ENST00000480127 HSP90AB3PQ58FF7 597 aa9.22□□□□□ -0.93
COL17A1-205ENST00000480127 KRT26Q7Z3Y9 468 aa9.22□□□□□ -0.93
COL17A1-205ENST00000480127 TMC4Q7Z404 712 aa9.22□□□□□ -0.93
COL17A1-205ENST00000480127 XAGE3Q8WTP9 111 aa9.22□□□□□ -0.93
COL17A1-205ENST00000480127 CCDC102AQ96A19 550 aa9.22□□□□□ -0.93
COL17A1-205ENST00000480127 DBNDD1Q9H9R9 158 aa9.22□□□□□ -0.93
COL17A1-205ENST00000480127 GBA2Q9HCG7 927 aaPredicted RBP9.22□□□□□ -0.93
COL17A1-205ENST00000480127 RNF186Q9NXI6 227 aa9.22□□□□□ -0.93
COL17A1-205ENST00000480127 TRMT112Q9UI30 125 aaKnown RBP9.22□□□□□ -0.93
COL17A1-205ENST00000480127 SH3TC1Q8TE82 1336 aa9.22□□□□□ -0.93
COL17A1-205ENST00000480127 LRRC37AA6NMS7 1700 aa9.22□□□□□ -0.93
COL17A1-205ENST00000480127 TAF1P21675 1872 aa9.21□□□□□ -0.93
COL17A1-205ENST00000480127 COL4A1P02462 1669 aa9.21□□□□□ -0.93
COL17A1-205ENST00000480127 TRPA1O75762 1119 aa9.21□□□□□ -0.94
COL17A1-205ENST00000480127 SOX10P56693 466 aa9.21□□□□□ -0.94
COL17A1-205ENST00000480127 C2orf69Q8N8R5 385 aa9.21□□□□□ -0.94
COL17A1-205ENST00000480127 CELF1Q92879 486 aaKnown RBP9.21□□□□□ -0.94
COL17A1-205ENST00000480127 ZNF428Q96B54 188 aa9.21□□□□□ -0.94
COL17A1-205ENST00000480127 KCNQ5Q9NR82 932 aa9.21□□□□□ -0.94
COL17A1-205ENST00000480127 POLLQ9UGP5 575 aa9.21□□□□□ -0.94
COL17A1-205ENST00000480127 RTL9Q8NET4 1388 aa9.21□□□□□ -0.94
COL17A1-205ENST00000480127 RIMBP2O15034 1052 aa9.2□□□□□ -0.94
COL17A1-205ENST00000480127 SLC10A3P09131 477 aa9.2□□□□□ -0.94
COL17A1-205ENST00000480127 RPS12P25398 132 aaKnown RBP9.2□□□□□ -0.94
COL17A1-205ENST00000480127 ZNF157P51786 506 aaPredicted RBP9.2□□□□□ -0.94
COL17A1-205ENST00000480127 GPSM2P81274 684 aa9.2□□□□□ -0.94
COL17A1-205ENST00000480127 SF3B3Q15393 1217 aaKnown RBP9.2□□□□□ -0.94
COL17A1-205ENST00000480127 RBM26Q5T8P6 1007 aaKnown RBP9.2□□□□□ -0.94
COL17A1-205ENST00000480127 DCPSQ96C86 337 aaKnown RBP9.2□□□□□ -0.94
COL17A1-205ENST00000480127 CSRNP1Q96S65 589 aa9.2□□□□□ -0.94
COL17A1-205ENST00000480127 BABAM1Q9NWV8 329 aa9.2□□□□□ -0.94
COL17A1-205ENST00000480127 NSFL1CQ9UNZ2 370 aaKnown RBP9.2□□□□□ -0.94
COL17A1-205ENST00000480127 TNRC18O15417 2968 aaPredicted RBP9.19□□□□□ -0.94
COL17A1-205ENST00000480127 C6orf229H3BNL8 230 aa9.19□□□□□ -0.94
COL17A1-205ENST00000480127 ECE2O60344 883 aa9.19□□□□□ -0.94
COL17A1-205ENST00000480127 TMPOP42166 694 aaKnown RBP9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms