RNA–Protein interactions for RNA: ENST00000479542.1

ABCF1-206, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 2

Gene ABCF1, Length 893 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-206ENST00000479542 PLBD2Q8NHP8 589 aa17.39■□□□□ 0.37
ABCF1-206ENST00000479542 XAGE3Q8WTP9 111 aa17.39■□□□□ 0.37
ABCF1-206ENST00000479542 TRMT112Q9UI30 125 aaKnown RBP17.39■□□□□ 0.37
ABCF1-206ENST00000479542 THSD7BQ9C0I4 1608 aa17.39■□□□□ 0.37
ABCF1-206ENST00000479542 TRPM7Q96QT4 1865 aa17.38■□□□□ 0.37
ABCF1-206ENST00000479542 LBX1P52954 281 aa17.38■□□□□ 0.37
ABCF1-206ENST00000479542 SF3B3Q15393 1217 aaKnown RBP17.38■□□□□ 0.37
ABCF1-206ENST00000479542 DPF2Q92785 391 aa17.38■□□□□ 0.37
ABCF1-206ENST00000479542 RUNDC1Q96C34 613 aa17.38■□□□□ 0.37
ABCF1-206ENST00000479542 TCERG1O14776 1098 aaKnown RBP17.37■□□□□ 0.37
ABCF1-206ENST00000479542 CAPNS2Q96L46 248 aa17.37■□□□□ 0.37
ABCF1-206ENST00000479542 GPR101Q96P66 508 aaPredicted RBP17.37■□□□□ 0.37
ABCF1-206ENST00000479542 ISCA1Q9BUE6 129 aa17.37■□□□□ 0.37
ABCF1-206ENST00000479542 MYBBP1AQ9BQG0 1328 aaKnown RBP17.37■□□□□ 0.37
ABCF1-206ENST00000479542 ANXA1P04083 346 aa17.36■□□□□ 0.37
ABCF1-206ENST00000479542 HCLS1P14317 486 aaPredicted RBP17.36■□□□□ 0.37
ABCF1-206ENST00000479542 ANKRD13DQ6ZTN6 518 aa17.36■□□□□ 0.37
ABCF1-206ENST00000479542 SAPCD2Q86UD0 394 aa17.36■□□□□ 0.37
ABCF1-206ENST00000479542 DBF4Q9UBU7 674 aaPredicted RBP17.36■□□□□ 0.37
ABCF1-206ENST00000479542 TRIM35Q9UPQ4 493 aa17.36■□□□□ 0.37
ABCF1-206ENST00000479542 CA12O43570 354 aa17.35■□□□□ 0.37
ABCF1-206ENST00000479542 GMPSP49915 693 aaPredicted RBP17.35■□□□□ 0.37
ABCF1-206ENST00000479542 AIMP1Q12904 312 aaKnown RBP17.35■□□□□ 0.37
ABCF1-206ENST00000479542 CDC37L1Q7L3B6 337 aa17.35■□□□□ 0.37
ABCF1-206ENST00000479542 BEGAINQ9BUH8 593 aa17.35■□□□□ 0.37
ABCF1-206ENST00000479542 HYPKQ9NX55 129 aa17.35■□□□□ 0.37
ABCF1-206ENST00000479542 LAMB2P55268 1798 aa17.34■□□□□ 0.37
ABCF1-206ENST00000479542 SLC51AQ86UW1 340 aa17.34■□□□□ 0.37
ABCF1-206ENST00000479542 CFAP44Q96MT7 982 aa17.34■□□□□ 0.37
ABCF1-206ENST00000479542 H7C1D1 291 aa17.33■□□□□ 0.36
ABCF1-206ENST00000479542 TRAF5O00463 557 aa17.33■□□□□ 0.36
ABCF1-206ENST00000479542 HSP90B1P14625 803 aaKnown RBP17.33■□□□□ 0.36
ABCF1-206ENST00000479542 HDGFL1Q5TGJ6 251 aa17.33■□□□□ 0.36
ABCF1-206ENST00000479542 CHPF2Q9P2E5 772 aa17.33■□□□□ 0.36
ABCF1-206ENST00000479542 CNOT7Q9UIV1 285 aaKnown RBP17.33■□□□□ 0.36
ABCF1-206ENST00000479542 LRRC37AA6NMS7 1700 aa17.33■□□□□ 0.36
ABCF1-206ENST00000479542 YDJCA8MPS7 323 aa17.32■□□□□ 0.36
ABCF1-206ENST00000479542 RPS12P25398 132 aaKnown RBP17.32■□□□□ 0.36
ABCF1-206ENST00000479542 HIRAP54198 1017 aaPredicted RBP17.32■□□□□ 0.36
ABCF1-206ENST00000479542 FMR1Q06787 632 aaKnown RBP eCLIP17.32■□□□□ 0.363e-7■□□□□ 9.3
ABCF1-206ENST00000479542 CYP4F22Q6NT55 531 aa17.32■□□□□ 0.36
ABCF1-206ENST00000479542 BCL2L13Q9BXK5 485 aa17.32■□□□□ 0.36
ABCF1-206ENST00000479542 CHMP4AQ9BY43 222 aa17.32■□□□□ 0.36
ABCF1-206ENST00000479542 CELF2O95319 508 aaKnown RBP17.31■□□□□ 0.36
ABCF1-206ENST00000479542 BRPF1P55201 1214 aaPredicted RBP17.31■□□□□ 0.36
ABCF1-206ENST00000479542 WASHC4Q2M389 1173 aa17.31■□□□□ 0.36
ABCF1-206ENST00000479542 NECTIN2Q92692 538 aa17.31■□□□□ 0.36
ABCF1-206ENST00000479542 RAD17O75943 681 aa17.3■□□□□ 0.36
ABCF1-206ENST00000479542 ZNF853P0CG23 659 aa17.3■□□□□ 0.36
ABCF1-206ENST00000479542 KRT24Q2M2I5 525 aa17.3■□□□□ 0.36
ABCF1-206ENST00000479542 ABHD8Q96I13 439 aa17.3■□□□□ 0.36
ABCF1-206ENST00000479542 PODXL2Q9NZ53 605 aa17.3■□□□□ 0.36
ABCF1-206ENST00000479542 DUOX1Q9NRD9 1551 aa17.3■□□□□ 0.36
ABCF1-206ENST00000479542 WDR43Q15061 677 aaKnown RBP eCLIP17.29■□□□□ 0.36
ABCF1-206ENST00000479542 NEUROD2Q15784 382 aa17.29■□□□□ 0.36
ABCF1-206ENST00000479542 FAM89AQ96GI7 184 aa17.29■□□□□ 0.36
ABCF1-206ENST00000479542 EYA3Q99504 573 aa17.29■□□□□ 0.36
ABCF1-206ENST00000479542 GLIS2Q9BZE0 524 aaPredicted RBP17.29■□□□□ 0.36
ABCF1-206ENST00000479542 ADAMTS8Q9UP79 889 aa17.29■□□□□ 0.36
ABCF1-206ENST00000479542 RPS8P62241 208 aaKnown RBP17.28■□□□□ 0.36
ABCF1-206ENST00000479542 DUSP27Q5VZP5 1158 aa17.28■□□□□ 0.36
ABCF1-206ENST00000479542 ZBTB38Q8NAP3 1195 aaPredicted RBP17.28■□□□□ 0.36
ABCF1-206ENST00000479542 CELF1Q92879 486 aaKnown RBP17.28■□□□□ 0.36
ABCF1-206ENST00000479542 NSFL1CQ9UNZ2 370 aaKnown RBP17.28■□□□□ 0.36
ABCF1-206ENST00000479542 DDX60Q8IY21 1712 aaKnown RBP17.27■□□□□ 0.36
ABCF1-206ENST00000479542 PSMD14O00487 310 aa17.27■□□□□ 0.36
ABCF1-206ENST00000479542 IRS4O14654 1257 aaPredicted RBP17.27■□□□□ 0.36
ABCF1-206ENST00000479542 RGS19P49795 217 aa17.27■□□□□ 0.36
ABCF1-206ENST00000479542 CALD1Q05682 793 aaKnown RBP17.27■□□□□ 0.36
ABCF1-206ENST00000479542 NOGQ13253 232 aa17.27■□□□□ 0.36
ABCF1-206ENST00000479542 PAXIP1Q6ZW49 1069 aaPredicted RBP17.27■□□□□ 0.36
ABCF1-206ENST00000479542 MICALL2Q8IY33 904 aa17.27■□□□□ 0.36
ABCF1-206ENST00000479542 TRPM4Q8TD43 1214 aa17.27■□□□□ 0.36
ABCF1-206ENST00000479542 POLLQ9UGP5 575 aa17.27■□□□□ 0.36
ABCF1-206ENST00000479542 ZNF609O15014 1411 aa17.27■□□□□ 0.35
ABCF1-206ENST00000479542 VIL1P09327 827 aaKnown RBP17.26■□□□□ 0.35
ABCF1-206ENST00000479542 CCDC146Q8IYE0 955 aa17.26■□□□□ 0.35
ABCF1-206ENST00000479542 CCDC191Q8NCU4 936 aa17.26■□□□□ 0.35
ABCF1-206ENST00000479542 IFT57Q9NWB7 429 aa17.26■□□□□ 0.35
ABCF1-206ENST00000479542 LAS1LQ9Y4W2 734 aaKnown RBP17.26■□□□□ 0.35
ABCF1-206ENST00000479542 TBC1D16Q8TBP0 767 aa17.25■□□□□ 0.35
ABCF1-206ENST00000479542 MBIPQ9NS73 344 aa17.25■□□□□ 0.35
ABCF1-206ENST00000479542 TAF1P21675 1872 aa17.24■□□□□ 0.35
ABCF1-206ENST00000479542 ATP5J2-PTCD1G3V325 749 aa17.24■□□□□ 0.35
ABCF1-206ENST00000479542 C6orf229H3BNL8 230 aa17.24■□□□□ 0.35
ABCF1-206ENST00000479542 AOC2O75106 756 aa17.24■□□□□ 0.35
ABCF1-206ENST00000479542 GNAI1P63096 354 aa17.24■□□□□ 0.35
ABCF1-206ENST00000479542 GPSM2P81274 684 aa17.24■□□□□ 0.35
ABCF1-206ENST00000479542 DDX10Q13206 875 aaKnown RBP17.24■□□□□ 0.35
ABCF1-206ENST00000479542 ZC3H12CQ9C0D7 883 aaKnown RBP17.24■□□□□ 0.35
ABCF1-206ENST00000479542 ECE2O60344 883 aa17.23■□□□□ 0.35
ABCF1-206ENST00000479542 PCCAP05165 728 aaPredicted RBP17.23■□□□□ 0.35
ABCF1-206ENST00000479542 GOLGA2Q08379 1002 aa17.23■□□□□ 0.35
ABCF1-206ENST00000479542 RIC3Q7Z5B4 369 aa17.23■□□□□ 0.35
ABCF1-206ENST00000479542 USP48Q86UV5 1035 aa17.23■□□□□ 0.35
ABCF1-206ENST00000479542 CCDC102AQ96A19 550 aa17.23■□□□□ 0.35
ABCF1-206ENST00000479542 DBNDD1Q9H9R9 158 aa17.23■□□□□ 0.35
ABCF1-206ENST00000479542 ZBTB12Q9Y330 459 aaPredicted RBP17.23■□□□□ 0.35
ABCF1-206ENST00000479542 PDE8AO60658 829 aa17.22■□□□□ 0.35
ABCF1-206ENST00000479542 CCDC152Q4G0S7 254 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms