RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 F13A1P00488 732 aa16.69■□□□□ 0.26
COL20A1-206ENST00000479501 TTLL5Q6EMB2 1281 aa16.69■□□□□ 0.26
COL20A1-206ENST00000479501 UQCRFS1P1P0C7P4 283 aa16.69■□□□□ 0.26
COL20A1-206ENST00000479501 MCM5P33992 734 aa16.69■□□□□ 0.26
COL20A1-206ENST00000479501 CDC5LQ99459 802 aaKnown RBP16.69■□□□□ 0.26
COL20A1-206ENST00000479501 ZSCAN16Q9H4T2 348 aaPredicted RBP16.69■□□□□ 0.26
COL20A1-206ENST00000479501 SLC52A2Q9HAB3 445 aa16.69■□□□□ 0.26
COL20A1-206ENST00000479501 GOLGA8AA7E2F4 631 aa16.68■□□□□ 0.26
COL20A1-206ENST00000479501 FSIP1Q8NA03 581 aa16.68■□□□□ 0.26
COL20A1-206ENST00000479501 CTDP1Q9Y5B0 961 aaPredicted RBP16.68■□□□□ 0.26
COL20A1-206ENST00000479501 CCDC171Q6TFL3 1326 aa16.68■□□□□ 0.26
COL20A1-206ENST00000479501 USP6P35125 1406 aa16.68■□□□□ 0.26
COL20A1-206ENST00000479501 SMTNL1A8MU46 457 aa16.68■□□□□ 0.26
COL20A1-206ENST00000479501 HCLS1P14317 486 aaPredicted RBP16.68■□□□□ 0.26
COL20A1-206ENST00000479501 PIBF1Q8WXW3 757 aa16.68■□□□□ 0.26
COL20A1-206ENST00000479501 RAD50Q92878 1312 aa16.68■□□□□ 0.26
COL20A1-206ENST00000479501 SGSM2O43147 1006 aa16.68■□□□□ 0.26
COL20A1-206ENST00000479501 KCNQ3O43525 872 aa16.68■□□□□ 0.26
COL20A1-206ENST00000479501 ATP2B2Q01814 1243 aa16.68■□□□□ 0.26
COL20A1-206ENST00000479501 Q6ZUG5 572 aa16.68■□□□□ 0.26
COL20A1-206ENST00000479501 IQCA1Q86XH1 822 aa16.68■□□□□ 0.26
COL20A1-206ENST00000479501 KLHDC4Q8TBB5 520 aa16.68■□□□□ 0.26
COL20A1-206ENST00000479501 ZNF496Q96IT1 587 aaPredicted RBP16.68■□□□□ 0.26
COL20A1-206ENST00000479501 NGLY1Q96IV0 654 aa16.68■□□□□ 0.26
COL20A1-206ENST00000479501 PHF23Q9BUL5 403 aaPredicted RBP16.68■□□□□ 0.26
COL20A1-206ENST00000479501 IGSF1Q8N6C5 1336 aa16.67■□□□□ 0.26
COL20A1-206ENST00000479501 GIMAP6Q6P9H5 292 aa16.67■□□□□ 0.26
COL20A1-206ENST00000479501 PCDH11XQ9BZA7 1347 aa16.67■□□□□ 0.26
COL20A1-206ENST00000479501 PCDH11YQ9BZA8 1340 aa16.67■□□□□ 0.26
COL20A1-206ENST00000479501 RANBP6O60518 1105 aaKnown RBP16.67■□□□□ 0.26
COL20A1-206ENST00000479501 SSH3Q8TE77 659 aa16.67■□□□□ 0.26
COL20A1-206ENST00000479501 TCEAL9Q9UHQ7 104 aa16.67■□□□□ 0.26
COL20A1-206ENST00000479501 CBFA2T2O43439 604 aa16.67■□□□□ 0.26
COL20A1-206ENST00000479501 CPA1P15085 419 aa16.67■□□□□ 0.26
COL20A1-206ENST00000479501 DNM1Q05193 864 aaKnown RBP16.67■□□□□ 0.26
COL20A1-206ENST00000479501 MICU3Q86XE3 530 aa16.67■□□□□ 0.26
COL20A1-206ENST00000479501 RAB11FIP4Q86YS3 637 aa16.67■□□□□ 0.26
COL20A1-206ENST00000479501 PLBD2Q8NHP8 589 aa16.67■□□□□ 0.26
COL20A1-206ENST00000479501 CDK5RAP3Q96JB5 506 aa16.67■□□□□ 0.26
COL20A1-206ENST00000479501 CEP131Q9UPN4 1083 aa16.67■□□□□ 0.26
COL20A1-206ENST00000479501 GIGYF1O75420 1035 aaPredicted RBP16.66■□□□□ 0.26
COL20A1-206ENST00000479501 IARSP41252 1262 aaKnown RBP16.66■□□□□ 0.26
COL20A1-206ENST00000479501 SOGA3Q5TF21 947 aa16.66■□□□□ 0.26
COL20A1-206ENST00000479501 SUCLG2Q96I99 432 aa16.66■□□□□ 0.26
COL20A1-206ENST00000479501 E9PCH4 1651 aa16.66■□□□□ 0.26
COL20A1-206ENST00000479501 TMEM67Q5HYA8 995 aa16.66■□□□□ 0.26
COL20A1-206ENST00000479501 KLF18A0A0U1RQI7 1052 aa16.66■□□□□ 0.26
COL20A1-206ENST00000479501 CDR1P51861 262 aa16.66■□□□□ 0.26
COL20A1-206ENST00000479501 RUFY3Q7L099 469 aa16.66■□□□□ 0.26
COL20A1-206ENST00000479501 POLR3DP05423 398 aaPredicted RBP16.66■□□□□ 0.26
COL20A1-206ENST00000479501 ZNF165P49910 485 aa16.65■□□□□ 0.26
COL20A1-206ENST00000479501 NAP1L1P55209 391 aaKnown RBP16.65■□□□□ 0.26
COL20A1-206ENST00000479501 UVSSAQ2YD98 709 aa16.65■□□□□ 0.26
COL20A1-206ENST00000479501 NLRP1Q9C000 1473 aa16.65■□□□□ 0.26
COL20A1-206ENST00000479501 ERICH4A6NGS2 130 aa16.65■□□□□ 0.26
COL20A1-206ENST00000479501 ADCY5O95622 1261 aa16.65■□□□□ 0.26
COL20A1-206ENST00000479501 SMARCE1Q969G3 411 aa16.65■□□□□ 0.26
COL20A1-206ENST00000479501 SYT1P21579 422 aa16.65■□□□□ 0.26
COL20A1-206ENST00000479501 PRIM1P49642 420 aaKnown RBP16.65■□□□□ 0.26
COL20A1-206ENST00000479501 GCKRQ14397 625 aa16.65■□□□□ 0.26
COL20A1-206ENST00000479501 SLC9C2Q5TAH2 1124 aa16.65■□□□□ 0.26
COL20A1-206ENST00000479501 CTCFLQ8NI51 663 aaPredicted RBP16.65■□□□□ 0.26
COL20A1-206ENST00000479501 METAP2P50579 478 aaKnown RBP eCLIP16.64■□□□□ 0.25
COL20A1-206ENST00000479501 TIMM10P62072 90 aa16.64■□□□□ 0.25
COL20A1-206ENST00000479501 SSRP1Q08945 709 aaKnown RBP16.64■□□□□ 0.25
COL20A1-206ENST00000479501 CCDC152Q4G0S7 254 aa16.64■□□□□ 0.25
COL20A1-206ENST00000479501 MAGEC2Q9UBF1 373 aaPredicted RBP16.64■□□□□ 0.25
COL20A1-206ENST00000479501 USP5P45974 858 aa16.64■□□□□ 0.25
COL20A1-206ENST00000479501 SKIDA1Q1XH10 827 aa16.64■□□□□ 0.25
COL20A1-206ENST00000479501 TAF3Q5VWG9 929 aa16.64■□□□□ 0.25
COL20A1-206ENST00000479501 DZIP1Q86YF9 867 aaKnown RBP16.64■□□□□ 0.25
COL20A1-206ENST00000479501 CAGE1Q8TC20 777 aa16.64■□□□□ 0.25
COL20A1-206ENST00000479501 MFSD6Q6ZSS7 791 aa16.64■□□□□ 0.25
COL20A1-206ENST00000479501 PPFIBP1Q86W92 1011 aa16.64■□□□□ 0.25
COL20A1-206ENST00000479501 CCDC144CPQ8IYA2 1237 aa16.64■□□□□ 0.25
COL20A1-206ENST00000479501 ANKIB1Q9P2G1 1089 aa16.64■□□□□ 0.25
COL20A1-206ENST00000479501 CDK12Q9NYV4 1490 aaPredicted RBP16.64■□□□□ 0.25
COL20A1-206ENST00000479501 CFAP100Q494V2 611 aa16.64■□□□□ 0.25
COL20A1-206ENST00000479501 DDX17Q92841 729 aaKnown RBP16.64■□□□□ 0.25
COL20A1-206ENST00000479501 TSPOAP1O95153 1857 aa16.63■□□□□ 0.25
COL20A1-206ENST00000479501 RNF113AO15541 343 aaKnown RBP16.63■□□□□ 0.25
COL20A1-206ENST00000479501 CCAR1Q8IX12 1150 aaKnown RBP16.63■□□□□ 0.25
COL20A1-206ENST00000479501 MKNK2Q9HBH9 465 aa16.63■□□□□ 0.25
COL20A1-206ENST00000479501 SNX14Q9Y5W7 946 aa16.63■□□□□ 0.25
COL20A1-206ENST00000479501 TNNI3KQ59H18 835 aa16.63■□□□□ 0.25
COL20A1-206ENST00000479501 AXDND1Q5T1B0 1012 aaPredicted RBP16.63■□□□□ 0.25
COL20A1-206ENST00000479501 FAM177A1Q8N128 213 aaPredicted RBP16.63■□□□□ 0.25
COL20A1-206ENST00000479501 DBNDD2Q9BQY9 259 aa16.63■□□□□ 0.25
COL20A1-206ENST00000479501 FPGT-TNNI3KV9GXZ4 949 aa16.63■□□□□ 0.25
COL20A1-206ENST00000479501 A2ML1A8K2U0 1454 aa16.63■□□□□ 0.25
COL20A1-206ENST00000479501 ABCA9Q8IUA7 1624 aa16.63■□□□□ 0.25
COL20A1-206ENST00000479501 MAPK8IP2Q13387 824 aaPredicted RBP16.63■□□□□ 0.25
COL20A1-206ENST00000479501 STIM1Q13586 685 aa16.63■□□□□ 0.25
COL20A1-206ENST00000479501 ATP6V1AP38606 617 aa16.62■□□□□ 0.25
COL20A1-206ENST00000479501 DZIP3Q86Y13 1208 aaKnown RBP16.62■□□□□ 0.25
COL20A1-206ENST00000479501 EYA2O00167 538 aa16.62■□□□□ 0.25
COL20A1-206ENST00000479501 A1BGP04217 495 aa16.62■□□□□ 0.25
COL20A1-206ENST00000479501 DDB1Q16531 1140 aa16.62■□□□□ 0.25
COL20A1-206ENST00000479501 ACSBG1Q96GR2 724 aa16.62■□□□□ 0.25
COL20A1-206ENST00000479501 GLI2P10070 1586 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms