RNA–Protein interactions for RNA: ENST00000479430.5

COPS7B-220, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3

Gene COPS7B, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-220ENST00000479430 GGNBP2Q9H3C7 697 aa5.58□□□□□ -1.52
COPS7B-220ENST00000479430 ROCK2O75116 1388 aaKnown RBP5.57□□□□□ -1.52
COPS7B-220ENST00000479430 TRIM6-TRIM34B2RNG4 842 aa5.57□□□□□ -1.52
COPS7B-220ENST00000479430 SLC10A3P09131 477 aa5.57□□□□□ -1.52
COPS7B-220ENST00000479430 TATP17735 454 aaPredicted RBP5.57□□□□□ -1.52
COPS7B-220ENST00000479430 KCNA1Q09470 495 aa5.57□□□□□ -1.52
COPS7B-220ENST00000479430 PACS2Q86VP3 889 aa5.57□□□□□ -1.52
COPS7B-220ENST00000479430 PRR7Q8TB68 274 aa5.57□□□□□ -1.52
COPS7B-220ENST00000479430 BCL2L12Q9HB09 334 aa5.57□□□□□ -1.52
COPS7B-220ENST00000479430 ANKRD31Q8N7Z5 1873 aa5.56□□□□□ -1.52
COPS7B-220ENST00000479430 LOC102724428A0A0B4J2F2 783 aa5.56□□□□□ -1.52
COPS7B-220ENST00000479430 POTECB2RU33 542 aa5.56□□□□□ -1.52
COPS7B-220ENST00000479430 NBPF26B4DH59 902 aa5.56□□□□□ -1.52
COPS7B-220ENST00000479430 PPP1R3GB7ZBB8 358 aa5.56□□□□□ -1.52
COPS7B-220ENST00000479430 CFAP99D6REC4 459 aa5.56□□□□□ -1.52
COPS7B-220ENST00000479430 PPM1GO15355 546 aaPredicted RBP5.56□□□□□ -1.52
COPS7B-220ENST00000479430 PTPREP23469 700 aa5.56□□□□□ -1.52
COPS7B-220ENST00000479430 SIK1P57059 783 aa5.56□□□□□ -1.52
COPS7B-220ENST00000479430 DDR1Q08345 913 aa5.56□□□□□ -1.52
COPS7B-220ENST00000479430 PROX2Q3B8N5 592 aa5.56□□□□□ -1.52
COPS7B-220ENST00000479430 PPP4R3BQ5MIZ7 849 aa5.56□□□□□ -1.52
COPS7B-220ENST00000479430 RAPGEF4Q8WZA2 1011 aa5.56□□□□□ -1.52
COPS7B-220ENST00000479430 UCN2Q96RP3 112 aa5.56□□□□□ -1.52
COPS7B-220ENST00000479430 USTQ9Y2C2 406 aa5.56□□□□□ -1.52
COPS7B-220ENST00000479430 EMILIN1Q9Y6C2 1016 aa5.56□□□□□ -1.52
COPS7B-220ENST00000479430 C10orf71Q711Q0 1435 aa5.56□□□□□ -1.52
COPS7B-220ENST00000479430 COL11A2P13942 1736 aaPredicted RBP5.55□□□□□ -1.52
COPS7B-220ENST00000479430 TJP1Q07157 1748 aa5.55□□□□□ -1.52
COPS7B-220ENST00000479430 PATL2C9JE40 543 aaKnown RBP5.55□□□□□ -1.52
COPS7B-220ENST00000479430 GYS1P13807 737 aa5.55□□□□□ -1.52
COPS7B-220ENST00000479430 LBX1P52954 281 aa5.55□□□□□ -1.52
COPS7B-220ENST00000479430 USP46P62068 366 aa5.55□□□□□ -1.52
COPS7B-220ENST00000479430 FMR1Q06787 632 aaKnown RBP eCLIP5.55□□□□□ -1.52
COPS7B-220ENST00000479430 MTMR2Q13614 643 aa5.55□□□□□ -1.52
COPS7B-220ENST00000479430 DOK7Q18PE1 504 aa5.55□□□□□ -1.52
COPS7B-220ENST00000479430 HDGFL2Q7Z4V5 671 aaPredicted RBP5.55□□□□□ -1.52
COPS7B-220ENST00000479430 VRTNQ9H8Y1 702 aa5.55□□□□□ -1.52
COPS7B-220ENST00000479430 ATG3Q9NT62 314 aa5.55□□□□□ -1.52
COPS7B-220ENST00000479430 IVNS1ABPQ9Y6Y0 642 aa5.55□□□□□ -1.52
COPS7B-220ENST00000479430 SLX4Q8IY92 1834 aa5.55□□□□□ -1.52
COPS7B-220ENST00000479430 DLEC1Q9Y238 1755 aa5.55□□□□□ -1.52
COPS7B-220ENST00000479430 FER1L6Q2WGJ9 1857 aa5.54□□□□□ -1.52
COPS7B-220ENST00000479430 ADAMTS7Q9UKP4 1686 aa5.54□□□□□ -1.52
COPS7B-220ENST00000479430 CCDC85CA6NKD9 419 aa5.54□□□□□ -1.52
COPS7B-220ENST00000479430 TMEM88BA6NKF7 163 aa5.54□□□□□ -1.52
COPS7B-220ENST00000479430 SSFA2P28290 1259 aa5.54□□□□□ -1.52
COPS7B-220ENST00000479430 TMF1P82094 1093 aa5.54□□□□□ -1.52
COPS7B-220ENST00000479430 FSTL1Q12841 308 aa5.54□□□□□ -1.52
COPS7B-220ENST00000479430 GRM1Q13255 1194 aa5.54□□□□□ -1.52
COPS7B-220ENST00000479430 DALRD3Q5D0E6 543 aaKnown RBP5.54□□□□□ -1.52
COPS7B-220ENST00000479430 TRAPPC3LQ5T215 181 aa5.54□□□□□ -1.52
COPS7B-220ENST00000479430 TBC1D9Q6ZT07 1266 aa5.54□□□□□ -1.52
COPS7B-220ENST00000479430 SMC1BQ8NDV3 1235 aa5.54□□□□□ -1.52
COPS7B-220ENST00000479430 FLAD1Q8NFF5 587 aa5.54□□□□□ -1.52
COPS7B-220ENST00000479430 SYMPKQ92797 1274 aaKnown RBP5.54□□□□□ -1.52
COPS7B-220ENST00000479430 COG3Q96JB2 828 aa5.54□□□□□ -1.52
COPS7B-220ENST00000479430 CCDC87Q9NVE4 849 aa5.54□□□□□ -1.52
COPS7B-220ENST00000479430 PARP3Q9Y6F1 533 aa5.54□□□□□ -1.52
COPS7B-220ENST00000479430 EDC4Q6P2E9 1401 aaKnown RBP5.54□□□□□ -1.52
COPS7B-220ENST00000479430 KDM2BQ8NHM5 1336 aa5.53□□□□□ -1.52
COPS7B-220ENST00000479430 PCDH11XQ9BZA7 1347 aa5.53□□□□□ -1.52
COPS7B-220ENST00000479430 PCDH11YQ9BZA8 1340 aa5.53□□□□□ -1.52
COPS7B-220ENST00000479430 C6orf229H3BNL8 230 aa5.53□□□□□ -1.52
COPS7B-220ENST00000479430 PTCD1O75127 700 aaKnown RBP5.53□□□□□ -1.52
COPS7B-220ENST00000479430 TGFB2P61812 414 aa5.53□□□□□ -1.52
COPS7B-220ENST00000479430 NR6A1Q15406 480 aa5.53□□□□□ -1.52
COPS7B-220ENST00000479430 SWT1Q5T5J6 900 aaKnown RBP5.53□□□□□ -1.52
COPS7B-220ENST00000479430 DCAF5Q96JK2 942 aa5.53□□□□□ -1.52
COPS7B-220ENST00000479430 ZSWIM6Q9HCJ5 1215 aa5.53□□□□□ -1.52
COPS7B-220ENST00000479430 TMOD3Q9NYL9 352 aa5.53□□□□□ -1.52
COPS7B-220ENST00000479430 PIM2Q9P1W9 311 aa5.53□□□□□ -1.52
COPS7B-220ENST00000479430 KIAA1468Q9P260 1216 aa5.53□□□□□ -1.52
COPS7B-220ENST00000479430 TNRC18O15417 2968 aaPredicted RBP5.53□□□□□ -1.52
COPS7B-220ENST00000479430 CARMIL3Q8ND23 1372 aa5.53□□□□□ -1.52
COPS7B-220ENST00000479430 E9PSI1 815 aa5.52□□□□□ -1.53
COPS7B-220ENST00000479430 FYB1O15117 783 aa5.52□□□□□ -1.53
COPS7B-220ENST00000479430 PER1O15534 1290 aaPredicted RBP5.52□□□□□ -1.53
COPS7B-220ENST00000479430 ATG7O95352 703 aa5.52□□□□□ -1.53
COPS7B-220ENST00000479430 RFC4P35249 363 aa5.52□□□□□ -1.53
COPS7B-220ENST00000479430 TNNT2P45379 298 aaPredicted RBP5.52□□□□□ -1.53
COPS7B-220ENST00000479430 VEGFBP49765 207 aa5.52□□□□□ -1.53
COPS7B-220ENST00000479430 SEMA3FQ13275 785 aa5.52□□□□□ -1.53
COPS7B-220ENST00000479430 BICDL1Q6ZP65 573 aa5.52□□□□□ -1.53
COPS7B-220ENST00000479430 HELBQ8NG08 1087 aaPredicted RBP5.52□□□□□ -1.53
COPS7B-220ENST00000479430 SMARCC1Q92922 1105 aaPredicted RBP5.52□□□□□ -1.53
COPS7B-220ENST00000479430 ABHD8Q96I13 439 aa5.52□□□□□ -1.53
COPS7B-220ENST00000479430 CARD11Q9BXL7 1154 aa5.52□□□□□ -1.53
COPS7B-220ENST00000479430 RTCBQ9Y3I0 505 aaKnown RBP5.52□□□□□ -1.53
COPS7B-220ENST00000479430 MAFBQ9Y5Q3 323 aaPredicted RBP5.52□□□□□ -1.53
COPS7B-220ENST00000479430 POLR2AP24928 1970 aaKnown RBP5.52□□□□□ -1.53
COPS7B-220ENST00000479430 NSD3Q9BZ95 1437 aa5.51□□□□□ -1.53
COPS7B-220ENST00000479430 NFKBIEO00221 500 aa5.51□□□□□ -1.53
COPS7B-220ENST00000479430 RIMBP2O15034 1052 aa5.51□□□□□ -1.53
COPS7B-220ENST00000479430 IGSF3O75054 1194 aa5.51□□□□□ -1.53
COPS7B-220ENST00000479430 DDNO94850 711 aaPredicted RBP5.51□□□□□ -1.53
COPS7B-220ENST00000479430 CCDC27Q2M243 656 aa5.51□□□□□ -1.53
COPS7B-220ENST00000479430 USPL1Q5W0Q7 1092 aa5.51□□□□□ -1.53
COPS7B-220ENST00000479430 SLC51AQ86UW1 340 aa5.51□□□□□ -1.53
COPS7B-220ENST00000479430 STAC3Q96MF2 364 aa5.51□□□□□ -1.53
COPS7B-220ENST00000479430 TERF2IPQ9NYB0 399 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms