RNA–Protein interactions for RNA: ENST00000479210.1

GLI3-206, Transcript of GLI family zinc finger 3, humanhuman

TSL 2

Gene GLI3, Length 4,968 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GLI3-206ENST00000479210 LINS1Q8NG48 757 aa16.53■□□□□ 0.24
GLI3-206ENST00000479210 SNX21Q969T3 373 aa16.53■□□□□ 0.24
GLI3-206ENST00000479210 IQSEC3Q9UPP2 1182 aaPredicted RBP16.53■□□□□ 0.24
GLI3-206ENST00000479210 IL15P40933 162 aaPredicted RBP16.52■□□□□ 0.24
GLI3-206ENST00000479210 CCDC152Q4G0S7 254 aa16.52■□□□□ 0.24
GLI3-206ENST00000479210 SPTY2D1Q68D10 685 aaPredicted RBP16.52■□□□□ 0.23
GLI3-206ENST00000479210 CEP85Q6P2H3 762 aa16.52■□□□□ 0.23
GLI3-206ENST00000479210 TCERG1LQ5VWI1 586 aa16.51■□□□□ 0.23
GLI3-206ENST00000479210 ALG1Q9BT22 464 aa16.51■□□□□ 0.23
GLI3-206ENST00000479210 ZBTB40Q9NUA8 1239 aa16.51■□□□□ 0.23
GLI3-206ENST00000479210 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.51■□□□□ 0.23
GLI3-206ENST00000479210 CCDC40Q4G0X9 1142 aa16.51■□□□□ 0.23
GLI3-206ENST00000479210 Q6ZUG5 572 aa16.51■□□□□ 0.23
GLI3-206ENST00000479210 LRRC59Q96AG4 307 aaKnown RBP16.51■□□□□ 0.23
GLI3-206ENST00000479210 CRNKL1Q9BZJ0 848 aaKnown RBP16.51■□□□□ 0.23
GLI3-206ENST00000479210 BIVM-ERCC5R4GMW8 1640 aa16.51■□□□□ 0.23
GLI3-206ENST00000479210 SNW1Q13573 536 aaKnown RBP16.51■□□□□ 0.23
GLI3-206ENST00000479210 UHRF1BP1LA0JNW5 1464 aa16.51■□□□□ 0.23
GLI3-206ENST00000479210 DUOX2Q9NRD8 1548 aa16.51■□□□□ 0.23
GLI3-206ENST00000479210 NBPF7P0C2Y1 421 aaPredicted RBP16.5■□□□□ 0.23
GLI3-206ENST00000479210 CYP7A1P22680 504 aa16.5■□□□□ 0.23
GLI3-206ENST00000479210 TRMT1LQ7Z2T5 733 aaKnown RBP16.5■□□□□ 0.23
GLI3-206ENST00000479210 SLC9C2Q5TAH2 1124 aa16.5■□□□□ 0.23
GLI3-206ENST00000479210 SMC5Q8IY18 1101 aa16.5■□□□□ 0.23
GLI3-206ENST00000479210 A2MP01023 1474 aa16.5■□□□□ 0.23
GLI3-206ENST00000479210 NMIQ13287 307 aaPredicted RBP16.5■□□□□ 0.23
GLI3-206ENST00000479210 CCDC178Q5BJE1 867 aa16.5■□□□□ 0.23
GLI3-206ENST00000479210 PLCD4Q9BRC7 762 aa16.5■□□□□ 0.23
GLI3-206ENST00000479210 PYM1Q9BRP8 204 aaKnown RBP16.5■□□□□ 0.23
GLI3-206ENST00000479210 KRT23Q9C075 422 aa16.5■□□□□ 0.23
GLI3-206ENST00000479210 DACT1Q9NYF0 836 aa16.5■□□□□ 0.23
GLI3-206ENST00000479210 IBSPP21815 317 aaPredicted RBP16.5■□□□□ 0.23
GLI3-206ENST00000479210 DNM1Q05193 864 aaKnown RBP16.5■□□□□ 0.23
GLI3-206ENST00000479210 NBPF6Q5VWK0 638 aa16.5■□□□□ 0.23
GLI3-206ENST00000479210 NBPF5PQ86XG9 351 aaPredicted RBP16.5■□□□□ 0.23
GLI3-206ENST00000479210 NBPF4Q96M43 638 aa16.5■□□□□ 0.23
GLI3-206ENST00000479210 PUS7Q96PZ0 661 aaKnown RBP16.5■□□□□ 0.23
GLI3-206ENST00000479210 N4BP3O15049 544 aa16.49■□□□□ 0.23
GLI3-206ENST00000479210 GBP2P32456 591 aaPredicted RBP16.49■□□□□ 0.23
GLI3-206ENST00000479210 CWF19L2Q2TBE0 894 aaKnown RBP16.49■□□□□ 0.23
GLI3-206ENST00000479210 KCNG4Q8TDN1 519 aa16.49■□□□□ 0.23
GLI3-206ENST00000479210 CGNQ9P2M7 1197 aaKnown RBP16.49■□□□□ 0.23
GLI3-206ENST00000479210 F13A1P00488 732 aa16.49■□□□□ 0.23
GLI3-206ENST00000479210 XRCC6P12956 609 aaKnown RBP eCLIP16.49■□□□□ 0.23
GLI3-206ENST00000479210 ESR2Q92731 530 aa16.49■□□□□ 0.23
GLI3-206ENST00000479210 SLC4A4Q9Y6R1 1079 aa16.49■□□□□ 0.23
GLI3-206ENST00000479210 ANO6Q4KMQ2 910 aa16.49■□□□□ 0.23
GLI3-206ENST00000479210 DHX37Q8IY37 1157 aaKnown RBP16.49■□□□□ 0.23
GLI3-206ENST00000479210 TMTC2Q8N394 836 aa16.49■□□□□ 0.23
GLI3-206ENST00000479210 NFATC2IPQ8NCF5 419 aa16.49■□□□□ 0.23
GLI3-206ENST00000479210 CCDC113Q9H0I3 377 aa16.49■□□□□ 0.23
GLI3-206ENST00000479210 NUP153P49790 1475 aaKnown RBP16.48■□□□□ 0.23
GLI3-206ENST00000479210 MCM3P25205 808 aa16.48■□□□□ 0.23
GLI3-206ENST00000479210 PPP4R3AQ6IN85 833 aa16.48■□□□□ 0.23
GLI3-206ENST00000479210 FLT4P35916 1363 aa16.48■□□□□ 0.23
GLI3-206ENST00000479210 RFC4P35249 363 aa16.48■□□□□ 0.23
GLI3-206ENST00000479210 MRPS27Q92552 414 aaKnown RBP16.48■□□□□ 0.23
GLI3-206ENST00000479210 ZNF830Q96NB3 372 aaPredicted RBP16.48■□□□□ 0.23
GLI3-206ENST00000479210 EZRP15311 586 aaKnown RBP16.48■□□□□ 0.23
GLI3-206ENST00000479210 GNG11P61952 73 aa16.48■□□□□ 0.23
GLI3-206ENST00000479210 FAM200AQ8TCP9 573 aa16.48■□□□□ 0.23
GLI3-206ENST00000479210 SCLT1Q96NL6 688 aa16.48■□□□□ 0.23
GLI3-206ENST00000479210 GOLGA6L9A6NEM1 432 aa16.48■□□□□ 0.23
GLI3-206ENST00000479210 POLR3GO15318 223 aaPredicted RBP16.48■□□□□ 0.23
GLI3-206ENST00000479210 CHMP4BP1P59074 171 aa16.48■□□□□ 0.23
GLI3-206ENST00000479210 RTN1Q16799 776 aa16.48■□□□□ 0.23
GLI3-206ENST00000479210 PLEKHM2Q8IWE5 1019 aa16.48■□□□□ 0.23
GLI3-206ENST00000479210 EYA1Q99502 592 aa16.48■□□□□ 0.23
GLI3-206ENST00000479210 FEZ1Q99689 392 aa16.48■□□□□ 0.23
GLI3-206ENST00000479210 SYCP2Q9BX26 1530 aa16.48■□□□□ 0.23
GLI3-206ENST00000479210 AFMP43652 599 aa16.47■□□□□ 0.23
GLI3-206ENST00000479210 UBASH3AP57075 661 aa16.47■□□□□ 0.23
GLI3-206ENST00000479210 PER1O15534 1290 aaPredicted RBP16.47■□□□□ 0.23
GLI3-206ENST00000479210 HLA-DOAP06340 250 aa16.47■□□□□ 0.23
GLI3-206ENST00000479210 WDR78Q5VTH9 848 aa16.47■□□□□ 0.23
GLI3-206ENST00000479210 CCDC150Q8NCX0 1101 aa16.47■□□□□ 0.23
GLI3-206ENST00000479210 CNNM2Q9H8M5 875 aa16.47■□□□□ 0.23
GLI3-206ENST00000479210 PAG1Q9NWQ8 432 aa16.47■□□□□ 0.23
GLI3-206ENST00000479210 TTC41PQ6P2S7 1318 aa16.47■□□□□ 0.23
GLI3-206ENST00000479210 NPHP3Q7Z494 1330 aa16.47■□□□□ 0.23
GLI3-206ENST00000479210 RIMS2Q9UQ26 1411 aa16.47■□□□□ 0.23
GLI3-206ENST00000479210 RAPGEF6Q8TEU7 1601 aa16.47■□□□□ 0.23
GLI3-206ENST00000479210 CETN1Q12798 172 aa16.47■□□□□ 0.23
GLI3-206ENST00000479210 HSP90AA4PQ58FG1 418 aa16.47■□□□□ 0.23
GLI3-206ENST00000479210 DYDC1Q8WWB3 177 aa16.47■□□□□ 0.23
GLI3-206ENST00000479210 TRIM47Q96LD4 638 aa16.47■□□□□ 0.23
GLI3-206ENST00000479210 PRDM10Q9NQV6 1147 aa16.47■□□□□ 0.23
GLI3-206ENST00000479210 MACROD2A1Z1Q3 448 aa16.47■□□□□ 0.23
GLI3-206ENST00000479210 MARCKSP29966 332 aaPredicted RBP16.47■□□□□ 0.23
GLI3-206ENST00000479210 IFIT1BQ5T764 474 aaKnown RBP16.47■□□□□ 0.23
GLI3-206ENST00000479210 CABP5Q9NP86 173 aa16.47■□□□□ 0.23
GLI3-206ENST00000479210 GSTTP1A0A1W2PQM5 241 aa16.46■□□□□ 0.23
GLI3-206ENST00000479210 FAM114A1Q8IWE2 563 aa16.46■□□□□ 0.23
GLI3-206ENST00000479210 EHMT1Q9H9B1 1298 aa16.46■□□□□ 0.23
GLI3-206ENST00000479210 NEBLO76041 1014 aa16.46■□□□□ 0.23
GLI3-206ENST00000479210 CCDC186Q7Z3E2 898 aa16.46■□□□□ 0.23
GLI3-206ENST00000479210 ZSWIM4Q9H7M6 989 aa16.46■□□□□ 0.23
GLI3-206ENST00000479210 USP8P40818 1118 aa16.46■□□□□ 0.23
GLI3-206ENST00000479210 AK2P54819 239 aa16.46■□□□□ 0.23
GLI3-206ENST00000479210 IFFO1Q0D2I5 559 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms