RNA–Protein interactions for RNA: ENST00000479176.5

FXR1-213, Transcript of FMR1 autosomal homolog 1, humanhuman

TSL 2

Gene FXR1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-213ENST00000479176 FANCIQ9NVI1 1328 aa13.67□□□□□ -0.22
FXR1-213ENST00000479176 KLRG2A4D1S0 409 aaPredicted RBP13.67□□□□□ -0.22
FXR1-213ENST00000479176 ELL2O00472 640 aaPredicted RBP13.67□□□□□ -0.22
FXR1-213ENST00000479176 TSPYL6Q8N831 410 aa13.67□□□□□ -0.22
FXR1-213ENST00000479176 NYXQ9GZU5 481 aa13.67□□□□□ -0.22
FXR1-213ENST00000479176 SALL2Q9Y467 1007 aaPredicted RBP13.67□□□□□ -0.22
FXR1-213ENST00000479176 SBF1O95248 1867 aa13.67□□□□□ -0.22
FXR1-213ENST00000479176 NPHP1O15259 732 aa13.66□□□□□ -0.22
FXR1-213ENST00000479176 SRGNP10124 158 aa13.66□□□□□ -0.22
FXR1-213ENST00000479176 GPTP24298 496 aa13.66□□□□□ -0.22
FXR1-213ENST00000479176 AIMP1Q12904 312 aaKnown RBP13.66□□□□□ -0.22
FXR1-213ENST00000479176 PARP10Q53GL7 1025 aa13.66□□□□□ -0.22
FXR1-213ENST00000479176 HSP90AB3PQ58FF7 597 aa13.66□□□□□ -0.22
FXR1-213ENST00000479176 DDX27Q96GQ7 796 aaKnown RBP13.66□□□□□ -0.22
FXR1-213ENST00000479176 CHMP4AQ9BY43 222 aa13.66□□□□□ -0.22
FXR1-213ENST00000479176 ADCY9O60503 1353 aa13.66□□□□□ -0.22
FXR1-213ENST00000479176 ABCC12Q96J65 1359 aa13.66□□□□□ -0.22
FXR1-213ENST00000479176 SLX4Q8IY92 1834 aa13.66□□□□□ -0.22
FXR1-213ENST00000479176 FAM177BA6PVY3 158 aa13.65□□□□□ -0.22
FXR1-213ENST00000479176 NTSR2O95665 410 aa13.65□□□□□ -0.22
FXR1-213ENST00000479176 MFSD10Q14728 455 aa13.65□□□□□ -0.22
FXR1-213ENST00000479176 SUSD4Q5VX71 490 aa13.65□□□□□ -0.22
FXR1-213ENST00000479176 STYK1Q6J9G0 422 aa13.65□□□□□ -0.22
FXR1-213ENST00000479176 TTLL6Q8N841 843 aa13.65□□□□□ -0.22
FXR1-213ENST00000479176 PLBD2Q8NHP8 589 aa13.65□□□□□ -0.22
FXR1-213ENST00000479176 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.65□□□□□ -0.22
FXR1-213ENST00000479176 FER1L6Q2WGJ9 1857 aa13.64□□□□□ -0.23
FXR1-213ENST00000479176 TCIRG1Q13488 830 aa13.64□□□□□ -0.23
FXR1-213ENST00000479176 TWISTNBQ3B726 338 aaPredicted RBP13.64□□□□□ -0.23
FXR1-213ENST00000479176 CCDC30Q5VVM6 783 aa13.64□□□□□ -0.23
FXR1-213ENST00000479176 ANKRD13DQ6ZTN6 518 aa13.64□□□□□ -0.23
FXR1-213ENST00000479176 RNF123Q5XPI4 1314 aa13.64□□□□□ -0.23
FXR1-213ENST00000479176 LAMB2P55268 1798 aa13.63□□□□□ -0.23
FXR1-213ENST00000479176 POTEB2H3BUK9 544 aa13.63□□□□□ -0.23
FXR1-213ENST00000479176 CRY2Q49AN0 593 aa13.63□□□□□ -0.23
FXR1-213ENST00000479176 ERFEQ4G0M1 354 aa13.63□□□□□ -0.23
FXR1-213ENST00000479176 DIEXFQ68CQ4 756 aaKnown RBP13.63□□□□□ -0.23
FXR1-213ENST00000479176 ARHGAP27Q6ZUM4 889 aa13.63□□□□□ -0.23
FXR1-213ENST00000479176 PPP1R42Q7Z4L9 355 aa13.63□□□□□ -0.23
FXR1-213ENST00000479176 NLRP10Q86W26 655 aa13.63□□□□□ -0.23
FXR1-213ENST00000479176 NUTM1Q86Y26 1132 aa13.63□□□□□ -0.23
FXR1-213ENST00000479176 ZNF784Q8NCA9 323 aaPredicted RBP13.63□□□□□ -0.23
FXR1-213ENST00000479176 ZNF622Q969S3 477 aaKnown RBP eCLIP13.63□□□□□ -0.23
FXR1-213ENST00000479176 MASTLQ96GX5 879 aa13.63□□□□□ -0.23
FXR1-213ENST00000479176 CCDC88AQ3V6T2 1871 aa13.62□□□□□ -0.23
FXR1-213ENST00000479176 NPR1P16066 1061 aa13.62□□□□□ -0.23
FXR1-213ENST00000479176 GTF2E1P29083 439 aaPredicted RBP13.62□□□□□ -0.23
FXR1-213ENST00000479176 CNKSR1Q969H4 720 aa13.62□□□□□ -0.23
FXR1-213ENST00000479176 ISCA1Q9BUE6 129 aa13.62□□□□□ -0.23
FXR1-213ENST00000479176 UTP14AQ9BVJ6 771 aaKnown RBP13.62□□□□□ -0.23
FXR1-213ENST00000479176 MYH16Q9H6N6 1097 aa13.62□□□□□ -0.23
FXR1-213ENST00000479176 PHAXQ9H814 394 aaKnown RBP13.62□□□□□ -0.23
FXR1-213ENST00000479176 C2orf72A6NCS6 295 aa13.61□□□□□ -0.23
FXR1-213ENST00000479176 SLC10A5Q5PT55 438 aa13.61□□□□□ -0.23
FXR1-213ENST00000479176 DDX60Q8IY21 1712 aaKnown RBP13.61□□□□□ -0.23
FXR1-213ENST00000479176 KIF3CO14782 793 aa13.6□□□□□ -0.23
FXR1-213ENST00000479176 VAMP4O75379 141 aa13.6□□□□□ -0.23
FXR1-213ENST00000479176 EXOSC9Q06265 439 aaKnown RBP13.6□□□□□ -0.23
FXR1-213ENST00000479176 TRIM28Q13263 835 aaKnown RBP13.6□□□□□ -0.23
FXR1-213ENST00000479176 PPP1R15BQ5SWA1 713 aa13.6□□□□□ -0.23
FXR1-213ENST00000479176 PRPF40BQ6NWY9 871 aaKnown RBP13.6□□□□□ -0.23
FXR1-213ENST00000479176 TMEM92Q6UXU6 159 aa13.6□□□□□ -0.23
FXR1-213ENST00000479176 MAMSTRQ6ZN01 415 aa13.6□□□□□ -0.23
FXR1-213ENST00000479176 C7orf43Q8WVR3 580 aa13.6□□□□□ -0.23
FXR1-213ENST00000479176 STK31Q9BXU1 1019 aa13.6□□□□□ -0.23
FXR1-213ENST00000479176 DICER1Q9UPY3 1922 aaKnown RBP13.6□□□□□ -0.23
FXR1-213ENST00000479176 POTEJP0CG39 1038 aa13.59□□□□□ -0.23
FXR1-213ENST00000479176 HOXA10P31260 410 aaPredicted RBP13.59□□□□□ -0.23
FXR1-213ENST00000479176 NFKBIEO00221 500 aa13.58□□□□□ -0.24
FXR1-213ENST00000479176 TCERG1O14776 1098 aaKnown RBP13.58□□□□□ -0.24
FXR1-213ENST00000479176 C21orf2O43822 256 aa13.58□□□□□ -0.24
FXR1-213ENST00000479176 FOXK1P85037 733 aa13.58□□□□□ -0.24
FXR1-213ENST00000479176 RIC3Q7Z5B4 369 aa13.58□□□□□ -0.24
FXR1-213ENST00000479176 SCUBE2Q9NQ36 999 aa13.58□□□□□ -0.24
FXR1-213ENST00000479176 SH3TC1Q8TE82 1336 aa13.58□□□□□ -0.24
FXR1-213ENST00000479176 TIAM2Q8IVF5 1701 aa13.57□□□□□ -0.24
FXR1-213ENST00000479176 ATP5J2-PTCD1G3V325 749 aa13.57□□□□□ -0.24
FXR1-213ENST00000479176 DDX58O95786 925 aaKnown RBP13.57□□□□□ -0.24
FXR1-213ENST00000479176 ALDH1B1P30837 517 aa13.57□□□□□ -0.24
FXR1-213ENST00000479176 PRELPP51888 382 aa13.57□□□□□ -0.24
FXR1-213ENST00000479176 RASSF7Q02833 373 aa13.57□□□□□ -0.24
FXR1-213ENST00000479176 DSG2Q14126 1118 aa13.57□□□□□ -0.24
FXR1-213ENST00000479176 E2F4Q16254 413 aa13.57□□□□□ -0.24
FXR1-213ENST00000479176 SOGA3Q5TF21 947 aa13.57□□□□□ -0.24
FXR1-213ENST00000479176 C9orf131Q5VYM1 1079 aa13.57□□□□□ -0.24
FXR1-213ENST00000479176 KSR2Q6VAB6 950 aa13.57□□□□□ -0.24
FXR1-213ENST00000479176 G2E3Q7L622 706 aa13.57□□□□□ -0.24
FXR1-213ENST00000479176 METTL22Q9BUU2 404 aaPredicted RBP13.57□□□□□ -0.24
FXR1-213ENST00000479176 TRMT112Q9UI30 125 aaKnown RBP13.57□□□□□ -0.24
FXR1-213ENST00000479176 LTBP3Q9NS15 1303 aa13.57□□□□□ -0.24
FXR1-213ENST00000479176 SNED1Q8TER0 1413 aa13.56□□□□□ -0.24
FXR1-213ENST00000479176 E9PSI1 815 aa13.56□□□□□ -0.24
FXR1-213ENST00000479176 SYNE4Q8N205 404 aa13.56□□□□□ -0.24
FXR1-213ENST00000479176 RPGRQ92834 1020 aaKnown RBP13.56□□□□□ -0.24
FXR1-213ENST00000479176 NLRP3Q96P20 1036 aa13.56□□□□□ -0.24
FXR1-213ENST00000479176 CRAMP1Q96RY5 1269 aa13.56□□□□□ -0.24
FXR1-213ENST00000479176 MYD88Q99836 296 aa13.56□□□□□ -0.24
FXR1-213ENST00000479176 PI4KAP2A4QPH2 592 aa13.55□□□□□ -0.24
FXR1-213ENST00000479176 HCLS1P14317 486 aaPredicted RBP13.55□□□□□ -0.24
FXR1-213ENST00000479176 LMNB1P20700 586 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms