RNA–Protein interactions for RNA: ENST00000478979.5

CCDC78-210, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,054 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-210ENST00000478979 CYP27B1O15528 508 aa16.75■□□□□ 0.27
CCDC78-210ENST00000478979 HSPA2P54652 639 aa16.75■□□□□ 0.27
CCDC78-210ENST00000478979 SLFNL1Q499Z3 407 aa16.75■□□□□ 0.27
CCDC78-210ENST00000478979 FAM173BQ6P4H8 233 aa16.75■□□□□ 0.27
CCDC78-210ENST00000478979 LARP1Q6PKG0 1096 aaKnown RBP16.75■□□□□ 0.27
CCDC78-210ENST00000478979 ERC1Q8IUD2 1116 aa16.75■□□□□ 0.27
CCDC78-210ENST00000478979 RPAP1Q9BWH6 1393 aaPredicted RBP16.74■□□□□ 0.27
CCDC78-210ENST00000478979 AP5Z1O43299 807 aa16.74■□□□□ 0.27
CCDC78-210ENST00000478979 PPFIA3O75145 1194 aa16.74■□□□□ 0.27
CCDC78-210ENST00000478979 NCBP1Q09161 790 aaKnown RBP16.74■□□□□ 0.27
CCDC78-210ENST00000478979 MTX1Q13505 466 aa16.74■□□□□ 0.27
CCDC78-210ENST00000478979 GCKRQ14397 625 aa16.74■□□□□ 0.27
CCDC78-210ENST00000478979 SPC24Q8NBT2 197 aa16.74■□□□□ 0.27
CCDC78-210ENST00000478979 CYP46A1Q9Y6A2 500 aa16.74■□□□□ 0.27
CCDC78-210ENST00000478979 STX6O43752 255 aa16.74■□□□□ 0.27
CCDC78-210ENST00000478979 CABP4P57796 275 aa16.74■□□□□ 0.27
CCDC78-210ENST00000478979 CCDC129Q6ZRS4 1044 aa16.74■□□□□ 0.27
CCDC78-210ENST00000478979 ZNF589Q86UQ0 364 aaPredicted RBP16.74■□□□□ 0.27
CCDC78-210ENST00000478979 EVI5LQ96CN4 794 aa16.74■□□□□ 0.27
CCDC78-210ENST00000478979 LMO7Q8WWI1 1683 aa16.73■□□□□ 0.27
CCDC78-210ENST00000478979 CCDC171Q6TFL3 1326 aa16.73■□□□□ 0.27
CCDC78-210ENST00000478979 KDM6AO15550 1401 aaPredicted RBP16.73■□□□□ 0.27
CCDC78-210ENST00000478979 C1orf167Q5SNV9 1468 aa16.73■□□□□ 0.27
CCDC78-210ENST00000478979 A0A087WZG4 1122 aa16.73■□□□□ 0.27
CCDC78-210ENST00000478979 TFCP2Q12800 502 aa16.73■□□□□ 0.27
CCDC78-210ENST00000478979 SEC62Q99442 399 aaKnown RBP16.73■□□□□ 0.27
CCDC78-210ENST00000478979 MEGF6O75095 1541 aa16.73■□□□□ 0.27
CCDC78-210ENST00000478979 ZKSCAN1P17029 563 aaPredicted RBP16.73■□□□□ 0.27
CCDC78-210ENST00000478979 CREB3L3Q68CJ9 461 aa16.73■□□□□ 0.27
CCDC78-210ENST00000478979 IFNL2Q8IZJ0 200 aa16.73■□□□□ 0.27
CCDC78-210ENST00000478979 CCDC85AQ96PX6 553 aaPredicted RBP16.73■□□□□ 0.27
CCDC78-210ENST00000478979 NAP1L2Q9ULW6 460 aaPredicted RBP16.73■□□□□ 0.27
CCDC78-210ENST00000478979 FOSBP53539 338 aa16.72■□□□□ 0.27
CCDC78-210ENST00000478979 ME3Q16798 604 aa16.72■□□□□ 0.27
CCDC78-210ENST00000478979 KAT6BQ8WYB5 2073 aa16.72■□□□□ 0.27
CCDC78-210ENST00000478979 ZSCAN22P10073 491 aaPredicted RBP16.72■□□□□ 0.27
CCDC78-210ENST00000478979 DNM1Q05193 864 aaKnown RBP16.72■□□□□ 0.27
CCDC78-210ENST00000478979 NEUROD6Q96NK8 337 aa16.72■□□□□ 0.27
CCDC78-210ENST00000478979 VGLL3A8MV65 326 aa16.71■□□□□ 0.27
CCDC78-210ENST00000478979 DDX46Q7L014 1031 aaKnown RBP16.71■□□□□ 0.27
CCDC78-210ENST00000478979 LRRC2Q9BYS8 371 aa16.71■□□□□ 0.27
CCDC78-210ENST00000478979 CTNNA3Q9UI47 895 aa16.71■□□□□ 0.27
CCDC78-210ENST00000478979 TMEM94Q12767 1356 aa16.71■□□□□ 0.27
CCDC78-210ENST00000478979 GABPB1Q06547 395 aaPredicted RBP16.71■□□□□ 0.26
CCDC78-210ENST00000478979 GIMAP6Q6P9H5 292 aa16.71■□□□□ 0.26
CCDC78-210ENST00000478979 TMEM87AQ8NBN3 555 aa16.71■□□□□ 0.26
CCDC78-210ENST00000478979 METTL22Q9BUU2 404 aaPredicted RBP16.71■□□□□ 0.26
CCDC78-210ENST00000478979 ZBTB3Q9H5J0 574 aa16.71■□□□□ 0.26
CCDC78-210ENST00000478979 TPCN1Q9ULQ1 816 aa16.71■□□□□ 0.26
CCDC78-210ENST00000478979 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.71■□□□□ 0.26
CCDC78-210ENST00000478979 USP54Q70EL1 1684 aa16.7■□□□□ 0.26
CCDC78-210ENST00000478979 N4BP2Q86UW6 1770 aaPredicted RBP16.7■□□□□ 0.26
CCDC78-210ENST00000478979 TPM3P06753 285 aa16.7■□□□□ 0.26
CCDC78-210ENST00000478979 SNRPA1P09661 255 aaKnown RBP16.7■□□□□ 0.26
CCDC78-210ENST00000478979 DBNDD2Q9BQY9 259 aa16.7■□□□□ 0.26
CCDC78-210ENST00000478979 DBNLQ9UJU6 430 aaKnown RBP16.7■□□□□ 0.26
CCDC78-210ENST00000478979 HEG1Q9ULI3 1381 aa16.69■□□□□ 0.26
CCDC78-210ENST00000478979 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.69■□□□□ 0.26
CCDC78-210ENST00000478979 SLC27A2O14975 620 aa16.69■□□□□ 0.26
CCDC78-210ENST00000478979 NCAPD2Q15021 1401 aa16.69■□□□□ 0.26
CCDC78-210ENST00000478979 LMBR1LQ6UX01 489 aa16.69■□□□□ 0.26
CCDC78-210ENST00000478979 FUCA2Q9BTY2 467 aa16.69■□□□□ 0.26
CCDC78-210ENST00000478979 STRN4Q9NRL3 753 aa16.69■□□□□ 0.26
CCDC78-210ENST00000478979 F13A1P00488 732 aa16.68■□□□□ 0.26
CCDC78-210ENST00000478979 A1BGP04217 495 aa16.68■□□□□ 0.26
CCDC78-210ENST00000478979 SLFN14P0C7P3 912 aa16.68■□□□□ 0.26
CCDC78-210ENST00000478979 ST3GAL1Q11201 340 aa16.68■□□□□ 0.26
CCDC78-210ENST00000478979 NECTIN1Q15223 517 aa16.68■□□□□ 0.26
CCDC78-210ENST00000478979 TTLL7Q6ZT98 887 aa16.68■□□□□ 0.26
CCDC78-210ENST00000478979 FMNL2Q96PY5 1086 aa16.68■□□□□ 0.26
CCDC78-210ENST00000478979 TAOK2Q9UL54 1235 aa16.68■□□□□ 0.26
CCDC78-210ENST00000478979 HDAC5Q9UQL6 1122 aa16.68■□□□□ 0.26
CCDC78-210ENST00000478979 USP42Q9H9J4 1324 aaKnown RBP16.68■□□□□ 0.26
CCDC78-210ENST00000478979 UBE2HP62256 183 aa16.68■□□□□ 0.26
CCDC78-210ENST00000478979 TOM1L2Q6ZVM7 507 aa16.68■□□□□ 0.26
CCDC78-210ENST00000478979 GOLGA6L6A8MZA4 724 aa16.68■□□□□ 0.26
CCDC78-210ENST00000478979 NAA30Q147X3 362 aaPredicted RBP16.68■□□□□ 0.26
CCDC78-210ENST00000478979 ZNF594Q96JF6 807 aaPredicted RBP16.68■□□□□ 0.26
CCDC78-210ENST00000478979 PTGS1P23219 599 aa16.67■□□□□ 0.26
CCDC78-210ENST00000478979 BCL11BQ9C0K0 894 aaPredicted RBP16.67■□□□□ 0.26
CCDC78-210ENST00000478979 DDX41Q9UJV9 622 aaKnown RBP16.67■□□□□ 0.26
CCDC78-210ENST00000478979 PTPN12Q05209 780 aaKnown RBP16.67■□□□□ 0.26
CCDC78-210ENST00000478979 BLOC1S2Q6QNY1 142 aa16.67■□□□□ 0.26
CCDC78-210ENST00000478979 C16orf45Q96MC5 204 aaPredicted RBP16.67■□□□□ 0.26
CCDC78-210ENST00000478979 ZSWIM6Q9HCJ5 1215 aa16.67■□□□□ 0.26
CCDC78-210ENST00000478979 SLIT3O75094 1523 aa16.67■□□□□ 0.26
CCDC78-210ENST00000478979 TIMM10P62072 90 aa16.66■□□□□ 0.26
CCDC78-210ENST00000478979 LARP1BQ659C4 914 aaKnown RBP16.66■□□□□ 0.26
CCDC78-210ENST00000478979 VPS53Q5VIR6 699 aa16.66■□□□□ 0.26
CCDC78-210ENST00000478979 CDK11BP21127 795 aaKnown RBP16.66■□□□□ 0.26
CCDC78-210ENST00000478979 SYCP1Q15431 976 aa16.66■□□□□ 0.26
CCDC78-210ENST00000478979 TNNI3KQ59H18 835 aa16.66■□□□□ 0.26
CCDC78-210ENST00000478979 CDC37L1Q7L3B6 337 aa16.66■□□□□ 0.26
CCDC78-210ENST00000478979 MAP4K1Q92918 833 aa16.66■□□□□ 0.26
CCDC78-210ENST00000478979 DCAF5Q96JK2 942 aa16.66■□□□□ 0.26
CCDC78-210ENST00000478979 PRDM11Q9NQV5 511 aa16.66■□□□□ 0.26
CCDC78-210ENST00000478979 TFIP11Q9UBB9 837 aaKnown RBP16.66■□□□□ 0.26
CCDC78-210ENST00000478979 FPGT-TNNI3KV9GXZ4 949 aa16.66■□□□□ 0.26
CCDC78-210ENST00000478979 C5P01031 1676 aa16.66■□□□□ 0.26
CCDC78-210ENST00000478979 HSP90B1P14625 803 aaKnown RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms