RNA–Protein interactions for RNA: ENST00000478887.1

SFI1-222, Transcript of SFI1 centrin binding protein, human

TSL 4

Gene SFI1, Length 662 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SFI1-222	ENST00000478887	ATF7IP	Q6VMQ6	1270 aa		12	□□□□□ -0.49
SFI1-222	ENST00000478887	DDX46	Q7L014	1031 aa	Known RBP	12	□□□□□ -0.49
SFI1-222	ENST00000478887	GRAPL	Q8TC17	118 aa	Predicted RBP	12	□□□□□ -0.49
SFI1-222	ENST00000478887	NFKBIE	O00221	500 aa		11.99	□□□□□ -0.49
SFI1-222	ENST00000478887	PPEF1	O14829	653 aa	Predicted RBP	11.99	□□□□□ -0.49
SFI1-222	ENST00000478887	CCDC152	Q4G0S7	254 aa		11.99	□□□□□ -0.49
SFI1-222	ENST00000478887	CCDC93	Q567U6	631 aa		11.99	□□□□□ -0.49
SFI1-222	ENST00000478887	ARHGAP27	Q6ZUM4	889 aa		11.99	□□□□□ -0.49
SFI1-222	ENST00000478887	TTLL11	Q8NHH1	800 aa		11.99	□□□□□ -0.49
SFI1-222	ENST00000478887	YTHDC1	Q96MU7	727 aa	Known RBP	11.99	□□□□□ -0.49
SFI1-222	ENST00000478887	LTBP3	Q9NS15	1303 aa		11.99	□□□□□ -0.49
SFI1-222	ENST00000478887	LRRC37A	A6NMS7	1700 aa		11.99	□□□□□ -0.49
SFI1-222	ENST00000478887	CACNA1S	Q13698	1873 aa		11.99	□□□□□ -0.49
SFI1-222	ENST00000478887	BBOX1	O75936	387 aa		11.98	□□□□□ -0.49
SFI1-222	ENST00000478887	NBPF7	P0C2Y1	421 aa	Predicted RBP	11.98	□□□□□ -0.49
SFI1-222	ENST00000478887	ZKSCAN2	Q63HK3	967 aa		11.98	□□□□□ -0.49
SFI1-222	ENST00000478887	INTS3	Q68E01	1043 aa	Known RBP	11.98	□□□□□ -0.49
SFI1-222	ENST00000478887	CC2D2B	Q6DHV5	1058 aa		11.98	□□□□□ -0.49
SFI1-222	ENST00000478887	TMC4	Q7Z404	712 aa		11.98	□□□□□ -0.49
SFI1-222	ENST00000478887	FRAT1	Q92837	279 aa	Predicted RBP	11.98	□□□□□ -0.49
SFI1-222	ENST00000478887	CELF1	Q92879	486 aa	Known RBP	11.98	□□□□□ -0.49
SFI1-222	ENST00000478887	C9orf78	Q9NZ63	289 aa	Predicted RBP	11.98	□□□□□ -0.49
SFI1-222	ENST00000478887	ZNF219	Q9P2Y4	722 aa	Predicted RBP	11.98	□□□□□ -0.49
SFI1-222	ENST00000478887	ATP6V0A2	Q9Y487	856 aa		11.98	□□□□□ -0.49
SFI1-222	ENST00000478887	GOLGB1	Q14789	3259 aa	Known RBP	11.98	□□□□□ -0.49
SFI1-222	ENST00000478887	CSF1R	P07333	972 aa		11.97	□□□□□ -0.49
SFI1-222	ENST00000478887	FOXO4	P98177	505 aa		11.97	□□□□□ -0.49
SFI1-222	ENST00000478887	RASSF7	Q02833	373 aa		11.97	□□□□□ -0.49
SFI1-222	ENST00000478887	GRIPAP1	Q4V328	841 aa		11.97	□□□□□ -0.49
SFI1-222	ENST00000478887	OLFM4	Q6UX06	510 aa		11.97	□□□□□ -0.49
SFI1-222	ENST00000478887	SLC51A	Q86UW1	340 aa		11.97	□□□□□ -0.49
SFI1-222	ENST00000478887	USP44	Q9H0E7	712 aa		11.97	□□□□□ -0.49
SFI1-222	ENST00000478887	SEC31B	Q9NQW1	1179 aa		11.97	□□□□□ -0.49
SFI1-222	ENST00000478887	RCAN3	Q9UKA8	241 aa		11.97	□□□□□ -0.49
SFI1-222	ENST00000478887	TNN	Q9UQP3	1299 aa		11.97	□□□□□ -0.49
SFI1-222	ENST00000478887	FER1L6	Q2WGJ9	1857 aa		11.97	□□□□□ -0.49
SFI1-222	ENST00000478887	PRELP	P51888	382 aa		11.96	□□□□□ -0.49
SFI1-222	ENST00000478887	FAM161A	Q3B820	660 aa		11.96	□□□□□ -0.49
SFI1-222	ENST00000478887	EPHA10	Q5JZY3	1008 aa		11.96	□□□□□ -0.49
SFI1-222	ENST00000478887	SP8	Q8IXZ3	490 aa		11.96	□□□□□ -0.49
SFI1-222	ENST00000478887	RTKN2	Q8IZC4	609 aa		11.96	□□□□□ -0.49
SFI1-222	ENST00000478887	KAZALD1	Q96I82	304 aa		11.96	□□□□□ -0.49
SFI1-222	ENST00000478887	SUCLG2	Q96I99	432 aa		11.96	□□□□□ -0.49
SFI1-222	ENST00000478887	CCDC85A	Q96PX6	553 aa	Predicted RBP	11.96	□□□□□ -0.49
SFI1-222	ENST00000478887	PSMD1	Q99460	953 aa		11.96	□□□□□ -0.49
SFI1-222	ENST00000478887	TAOK3	Q9H2K8	898 aa		11.96	□□□□□ -0.49
SFI1-222	ENST00000478887	GREM2	Q9H772	168 aa		11.96	□□□□□ -0.49
SFI1-222	ENST00000478887	MYH3	P11055	1940 aa		11.96	□□□□□ -0.5
SFI1-222	ENST00000478887	LMNB1	P20700	586 aa		11.95	□□□□□ -0.5
SFI1-222	ENST00000478887	RPS8	P62241	208 aa	Known RBP	11.95	□□□□□ -0.5
SFI1-222	ENST00000478887	FKBP4	Q02790	459 aa	Known RBP eCLIP	11.95	□□□□□ -0.5
SFI1-222	ENST00000478887	RABL6	Q3YEC7	729 aa	Predicted RBP	11.95	□□□□□ -0.5
SFI1-222	ENST00000478887	CDC5L	Q99459	802 aa	Known RBP	11.95	□□□□□ -0.5
SFI1-222	ENST00000478887	DUOX1	Q9NRD9	1551 aa		11.95	□□□□□ -0.5
SFI1-222	ENST00000478887	UTRN	P46939	3433 aa		11.94	□□□□□ -0.5
SFI1-222	ENST00000478887	CHD4	Q14839	1912 aa		11.94	□□□□□ -0.5
SFI1-222	ENST00000478887	ITGA6	P23229	1130 aa		11.94	□□□□□ -0.5
SFI1-222	ENST00000478887	C9orf131	Q5VYM1	1079 aa		11.94	□□□□□ -0.5
SFI1-222	ENST00000478887	LMBR1L	Q6UX01	489 aa		11.94	□□□□□ -0.5
SFI1-222	ENST00000478887	ANKRD18A	Q8IVF6	992 aa		11.94	□□□□□ -0.5
SFI1-222	ENST00000478887	CLUAP1	Q96AJ1	413 aa		11.94	□□□□□ -0.5
SFI1-222	ENST00000478887	LTBP1	Q14766	1721 aa		11.94	□□□□□ -0.5
SFI1-222	ENST00000478887	ZC3H4	Q9UPT8	1303 aa	Known RBP	11.93	□□□□□ -0.5
SFI1-222	ENST00000478887	UBTFL1	P0CB47	393 aa	Predicted RBP	11.93	□□□□□ -0.5
SFI1-222	ENST00000478887	YY1	P25490	414 aa		11.93	□□□□□ -0.5
SFI1-222	ENST00000478887	DZIP1L	Q8IYY4	767 aa	Known RBP	11.93	□□□□□ -0.5
SFI1-222	ENST00000478887	TMEM57	Q8N5G2	664 aa		11.93	□□□□□ -0.5
SFI1-222	ENST00000478887	ANKRD44	Q8N8A2	993 aa		11.93	□□□□□ -0.5
SFI1-222	ENST00000478887	CNKSR2	Q8WXI2	1034 aa		11.93	□□□□□ -0.5
SFI1-222	ENST00000478887	MEIS3	Q99687	375 aa		11.93	□□□□□ -0.5
SFI1-222	ENST00000478887	RTFDC1	Q9BY42	306 aa	Predicted RBP	11.93	□□□□□ -0.5
SFI1-222	ENST00000478887	TMX4	Q9H1E5	349 aa	Predicted RBP	11.93	□□□□□ -0.5
SFI1-222	ENST00000478887	BICC1	Q9H694	974 aa	Known RBP	11.93	□□□□□ -0.5
SFI1-222	ENST00000478887	RNF181	Q9P0P0	153 aa		11.93	□□□□□ -0.5
SFI1-222	ENST00000478887	TAF1	P21675	1872 aa		11.92	□□□□□ -0.5
SFI1-222	ENST00000478887	ANKRD18B	A2A2Z9	1011 aa		11.92	□□□□□ -0.5
SFI1-222	ENST00000478887	GNAI3	P08754	354 aa		11.92	□□□□□ -0.5
SFI1-222	ENST00000478887	RLBP1	P12271	317 aa		11.92	□□□□□ -0.5
SFI1-222	ENST00000478887	FTSJ3	Q8IY81	847 aa	Known RBP	11.92	□□□□□ -0.5
SFI1-222	ENST00000478887	MPND	Q8N594	471 aa		11.92	□□□□□ -0.5
SFI1-222	ENST00000478887	BSDC1	Q9NW68	430 aa	Predicted RBP	11.92	□□□□□ -0.5
SFI1-222	ENST00000478887	TIAM2	Q8IVF5	1701 aa		11.91	□□□□□ -0.5
SFI1-222	ENST00000478887	MS4A1	P11836	297 aa		11.91	□□□□□ -0.5
SFI1-222	ENST00000478887	IGHMBP2	P38935	993 aa	Known RBP	11.91	□□□□□ -0.5
SFI1-222	ENST00000478887	IFIT5	Q13325	482 aa	Known RBP	11.91	□□□□□ -0.5
SFI1-222	ENST00000478887	DPP8	Q6V1X1	898 aa	Predicted RBP	11.91	□□□□□ -0.5
SFI1-222	ENST00000478887	ZNF277	Q9NRM2	450 aa	Predicted RBP	11.91	□□□□□ -0.5
SFI1-222	ENST00000478887	PODXL2	Q9NZ53	605 aa		11.91	□□□□□ -0.5
SFI1-222	ENST00000478887	HDAC5	Q9UQL6	1122 aa		11.91	□□□□□ -0.5
SFI1-222	ENST00000478887	CHMP3	Q9Y3E7	222 aa		11.91	□□□□□ -0.5
SFI1-222	ENST00000478887	SBF1	O95248	1867 aa		11.91	□□□□□ -0.5
SFI1-222	ENST00000478887	COL4A5	P29400	1685 aa		11.91	□□□□□ -0.5
SFI1-222	ENST00000478887	IARS	P41252	1262 aa	Known RBP	11.9	□□□□□ -0.5
SFI1-222	ENST00000478887	GPSM2	P81274	684 aa		11.9	□□□□□ -0.5
SFI1-222	ENST00000478887	CCDC57	Q2TAC2	916 aa		11.9	□□□□□ -0.5
SFI1-222	ENST00000478887	SUPT20H	Q8NEM7	779 aa		11.9	□□□□□ -0.5
SFI1-222	ENST00000478887	VPS33B	Q9H267	617 aa		11.9	□□□□□ -0.5
SFI1-222	ENST00000478887	LRRFIP2	Q9Y608	721 aa	Known RBP	11.9	□□□□□ -0.5
SFI1-222	ENST00000478887	XDH	P47989	1333 aa		11.89	□□□□□ -0.51
SFI1-222	ENST00000478887	ITPRIP	Q8IWB1	547 aa		11.89	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms