RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 ZFATQ9P243 1243 aa8.04□□□□□ -1.12
CDC42BPA-212ENST00000478573 PRMT3O60678 531 aa8.03□□□□□ -1.12
CDC42BPA-212ENST00000478573 ELNP15502 786 aa8.03□□□□□ -1.12
CDC42BPA-212ENST00000478573 ITGB7P26010 798 aa8.03□□□□□ -1.12
CDC42BPA-212ENST00000478573 FKBP5Q13451 457 aaPredicted RBP8.03□□□□□ -1.12
CDC42BPA-212ENST00000478573 PCSK7Q16549 785 aa8.03□□□□□ -1.12
CDC42BPA-212ENST00000478573 RSPO4Q2I0M5 234 aaPredicted RBP8.03□□□□□ -1.12
CDC42BPA-212ENST00000478573 SHISA2Q6UWI4 295 aa8.03□□□□□ -1.12
CDC42BPA-212ENST00000478573 RGL4Q8IZJ4 473 aa8.03□□□□□ -1.12
CDC42BPA-212ENST00000478573 MYO19Q96H55 970 aa8.03□□□□□ -1.12
CDC42BPA-212ENST00000478573 LRFN2Q9ULH4 789 aa8.03□□□□□ -1.12
CDC42BPA-212ENST00000478573 C9orf172C9J069 976 aa8.02□□□□□ -1.13
CDC42BPA-212ENST00000478573 SELPP16109 830 aa8.02□□□□□ -1.13
CDC42BPA-212ENST00000478573 ELMSAN1Q6PJG2 1045 aa8.02□□□□□ -1.13
CDC42BPA-212ENST00000478573 HFE2Q6ZVN8 426 aa8.02□□□□□ -1.13
CDC42BPA-212ENST00000478573 CMTR1Q8N1G2 835 aaKnown RBP8.02□□□□□ -1.13
CDC42BPA-212ENST00000478573 USP21Q9UK80 565 aa8.02□□□□□ -1.13
CDC42BPA-212ENST00000478573 MAP3K6O95382 1288 aa8.01□□□□□ -1.13
CDC42BPA-212ENST00000478573 ZMYM1Q5SVZ6 1142 aa8.01□□□□□ -1.13
CDC42BPA-212ENST00000478573 TREML1Q86YW5 311 aa8.01□□□□□ -1.13
CDC42BPA-212ENST00000478573 RTCBQ9Y3I0 505 aaKnown RBP8.01□□□□□ -1.13
CDC42BPA-212ENST00000478573 ZBTB42B2RXF5 422 aa8□□□□□ -1.13
CDC42BPA-212ENST00000478573 XYLBO75191 536 aa8□□□□□ -1.13
CDC42BPA-212ENST00000478573 EIF2AK2P19525 551 aaKnown RBP8□□□□□ -1.13
CDC42BPA-212ENST00000478573 ARID4AP29374 1257 aaPredicted RBP8□□□□□ -1.13
CDC42BPA-212ENST00000478573 MBTPS1Q14703 1052 aa8□□□□□ -1.13
CDC42BPA-212ENST00000478573 COX20Q5RI15 118 aa8□□□□□ -1.13
CDC42BPA-212ENST00000478573 PERM1Q5SV97 790 aa8□□□□□ -1.13
CDC42BPA-212ENST00000478573 LPIN3Q9BQK8 851 aa8□□□□□ -1.13
CDC42BPA-212ENST00000478573 MKNK1Q9BUB5 465 aa8□□□□□ -1.13
CDC42BPA-212ENST00000478573 ZMIZ1Q9ULJ6 1067 aa8□□□□□ -1.13
CDC42BPA-212ENST00000478573 DYRK3O43781 588 aa7.99□□□□□ -1.13
CDC42BPA-212ENST00000478573 GPLD1P80108 840 aa7.99□□□□□ -1.13
CDC42BPA-212ENST00000478573 PLAURQ03405 335 aa7.99□□□□□ -1.13
CDC42BPA-212ENST00000478573 ADGRE1Q14246 886 aa7.99□□□□□ -1.13
CDC42BPA-212ENST00000478573 SWI5Q1ZZU3 235 aa7.99□□□□□ -1.13
CDC42BPA-212ENST00000478573 NKAPLQ5M9Q1 402 aa7.99□□□□□ -1.13
CDC42BPA-212ENST00000478573 MSL1Q68DK7 614 aa7.99□□□□□ -1.13
CDC42BPA-212ENST00000478573 FMR1NBQ8N0W7 255 aaPredicted RBP7.99□□□□□ -1.13
CDC42BPA-212ENST00000478573 TRPM4Q8TD43 1214 aa7.99□□□□□ -1.13
CDC42BPA-212ENST00000478573 ACIN1Q9UKV3 1341 aaKnown RBP7.99□□□□□ -1.13
CDC42BPA-212ENST00000478573 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.98□□□□□ -1.13
CDC42BPA-212ENST00000478573 OPLAHO14841 1288 aa7.98□□□□□ -1.13
CDC42BPA-212ENST00000478573 NRG1Q02297 640 aaPredicted RBP7.98□□□□□ -1.13
CDC42BPA-212ENST00000478573 TXNRD3Q86VQ6 643 aa7.98□□□□□ -1.13
CDC42BPA-212ENST00000478573 WFDC8Q8IUA0 241 aa7.98□□□□□ -1.13
CDC42BPA-212ENST00000478573 STK32AQ8WU08 396 aa7.98□□□□□ -1.13
CDC42BPA-212ENST00000478573 LENG1Q96BZ8 264 aaPredicted RBP7.98□□□□□ -1.13
CDC42BPA-212ENST00000478573 SMG9Q9H0W8 520 aaKnown RBP7.98□□□□□ -1.13
CDC42BPA-212ENST00000478573 FRRS1LQ9P0K9 344 aa7.98□□□□□ -1.13
CDC42BPA-212ENST00000478573 SCO2A0A1W2PP80 73 aa7.97□□□□□ -1.13
CDC42BPA-212ENST00000478573 NSUN5Q96P11 429 aaKnown RBP7.97□□□□□ -1.13
CDC42BPA-212ENST00000478573 SAP130Q9H0E3 1048 aa7.97□□□□□ -1.13
CDC42BPA-212ENST00000478573 PSAPP07602 524 aa7.96□□□□□ -1.14
CDC42BPA-212ENST00000478573 GRIK5Q16478 980 aa7.96□□□□□ -1.14
CDC42BPA-212ENST00000478573 TP53INP1Q96A56 240 aa7.96□□□□□ -1.14
CDC42BPA-212ENST00000478573 C11orf16Q9NQ32 467 aa7.96□□□□□ -1.14
CDC42BPA-212ENST00000478573 TLR7Q9NYK1 1049 aaKnown RBP7.96□□□□□ -1.14
CDC42BPA-212ENST00000478573 J3QW42 95 aa7.95□□□□□ -1.14
CDC42BPA-212ENST00000478573 GHRHP01286 108 aa7.95□□□□□ -1.14
CDC42BPA-212ENST00000478573 NRLP54845 237 aa7.95□□□□□ -1.14
CDC42BPA-212ENST00000478573 NAA30Q147X3 362 aaPredicted RBP7.95□□□□□ -1.14
CDC42BPA-212ENST00000478573 C16orf46Q6P387 395 aa7.95□□□□□ -1.14
CDC42BPA-212ENST00000478573 ETFBKMTQ8IXQ9 262 aa7.95□□□□□ -1.14
CDC42BPA-212ENST00000478573 MMP20O60882 483 aa7.94□□□□□ -1.14
CDC42BPA-212ENST00000478573 BRD2P25440 801 aaKnown RBP7.94□□□□□ -1.14
CDC42BPA-212ENST00000478573 ELOAQ14241 798 aaKnown RBP7.94□□□□□ -1.14
CDC42BPA-212ENST00000478573 OCLNQ16625 522 aa7.94□□□□□ -1.14
CDC42BPA-212ENST00000478573 PRSS36Q5K4E3 855 aa7.94□□□□□ -1.14
CDC42BPA-212ENST00000478573 GDF6Q6KF10 455 aaPredicted RBP7.94□□□□□ -1.14
CDC42BPA-212ENST00000478573 PLD4Q96BZ4 506 aa7.94□□□□□ -1.14
CDC42BPA-212ENST00000478573 KCNMB2Q9Y691 235 aa7.94□□□□□ -1.14
CDC42BPA-212ENST00000478573 LOC102724428A0A0B4J2F2 783 aa7.93□□□□□ -1.14
CDC42BPA-212ENST00000478573 EGFRP00533 1210 aa7.93□□□□□ -1.14
CDC42BPA-212ENST00000478573 SIK1P57059 783 aa7.93□□□□□ -1.14
CDC42BPA-212ENST00000478573 FAM69CQ0P6D2 419 aa7.93□□□□□ -1.14
CDC42BPA-212ENST00000478573 CAPN12Q6ZSI9 719 aa7.93□□□□□ -1.14
CDC42BPA-212ENST00000478573 FBXO11Q86XK2 927 aa7.93□□□□□ -1.14
CDC42BPA-212ENST00000478573 DTWD1Q8N5C7 304 aa7.93□□□□□ -1.14
CDC42BPA-212ENST00000478573 RBSNQ9H1K0 784 aa7.93□□□□□ -1.14
CDC42BPA-212ENST00000478573 TRIP4Q15650 581 aaPredicted RBP7.92□□□□□ -1.14
CDC42BPA-212ENST00000478573 TMEM164Q5U3C3 297 aa7.92□□□□□ -1.14
CDC42BPA-212ENST00000478573 ZMYND15Q9H091 742 aa7.92□□□□□ -1.14
CDC42BPA-212ENST00000478573 CXXC1Q9P0U4 656 aaPredicted RBP7.92□□□□□ -1.14
CDC42BPA-212ENST00000478573 UBAP1LF5GYI3 381 aa7.91□□□□□ -1.14
CDC42BPA-212ENST00000478573 IREB2P48200 963 aaKnown RBP7.91□□□□□ -1.14
CDC42BPA-212ENST00000478573 FOXD4L6Q3SYB3 417 aaPredicted RBP7.91□□□□□ -1.14
CDC42BPA-212ENST00000478573 FOXD4L3Q6VB84 417 aaPredicted RBP7.91□□□□□ -1.14
CDC42BPA-212ENST00000478573 ILDR2Q71H61 639 aa7.91□□□□□ -1.14
CDC42BPA-212ENST00000478573 TTC9Q92623 222 aa7.91□□□□□ -1.14
CDC42BPA-212ENST00000478573 ATG7O95352 703 aa7.9□□□□□ -1.14
CDC42BPA-212ENST00000478573 FAM26DQ5JW98 314 aa7.9□□□□□ -1.14
CDC42BPA-212ENST00000478573 NLRP13Q86W25 1043 aa7.9□□□□□ -1.14
CDC42BPA-212ENST00000478573 IL22RA1Q8N6P7 574 aa7.9□□□□□ -1.14
CDC42BPA-212ENST00000478573 WFDC12Q8WWY7 111 aa7.9□□□□□ -1.14
CDC42BPA-212ENST00000478573 CCDC97Q96F63 343 aaPredicted RBP7.9□□□□□ -1.14
CDC42BPA-212ENST00000478573 TNFRSF10BO14763 440 aa7.89□□□□□ -1.15
CDC42BPA-212ENST00000478573 DEAF1O75398 565 aaPredicted RBP7.89□□□□□ -1.15
CDC42BPA-212ENST00000478573 H2AFB1P0C5Y9 115 aa7.89□□□□□ -1.15
CDC42BPA-212ENST00000478573 H2AFB2P0C5Z0 115 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms