RNA–Protein interactions for RNA: ENST00000478525.1

HPS3-205, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 601 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-205ENST00000478525 GRIK5Q16478 980 aa7.71□□□□□ -1.18
HPS3-205ENST00000478525 MSL1Q68DK7 614 aa7.71□□□□□ -1.18
HPS3-205ENST00000478525 KRT25Q7Z3Z0 450 aa7.71□□□□□ -1.18
HPS3-205ENST00000478525 ZBTB42B2RXF5 422 aa7.7□□□□□ -1.18
HPS3-205ENST00000478525 MAP3K6O95382 1288 aa7.7□□□□□ -1.18
HPS3-205ENST00000478525 PERM1Q5SV97 790 aa7.7□□□□□ -1.18
HPS3-205ENST00000478525 KANK4Q5T7N3 995 aaPredicted RBP7.7□□□□□ -1.18
HPS3-205ENST00000478525 MLLT1Q03111 559 aaPredicted RBP7.69□□□□□ -1.18
HPS3-205ENST00000478525 DGKZQ13574 1117 aa7.69□□□□□ -1.18
HPS3-205ENST00000478525 DHX32Q7L7V1 743 aaKnown RBP7.69□□□□□ -1.18
HPS3-205ENST00000478525 ANKMY2Q8IV38 441 aa7.69□□□□□ -1.18
HPS3-205ENST00000478525 PPP1R12CQ9BZL4 782 aa7.69□□□□□ -1.18
HPS3-205ENST00000478525 QTRT2Q9H974 415 aaKnown RBP7.69□□□□□ -1.18
HPS3-205ENST00000478525 FRRS1LQ9P0K9 344 aa7.69□□□□□ -1.18
HPS3-205ENST00000478525 FAM196BA6NMK8 535 aa7.68□□□□□ -1.18
HPS3-205ENST00000478525 ARSDP51689 593 aa7.68□□□□□ -1.18
HPS3-205ENST00000478525 LRP8Q14114 963 aa7.68□□□□□ -1.18
HPS3-205ENST00000478525 DTWD1Q8N5C7 304 aa7.68□□□□□ -1.18
HPS3-205ENST00000478525 TRPM4Q8TD43 1214 aa7.68□□□□□ -1.18
HPS3-205ENST00000478525 IFT43Q96FT9 208 aa7.68□□□□□ -1.18
HPS3-205ENST00000478525 RARAP10276 462 aa7.67□□□□□ -1.18
HPS3-205ENST00000478525 TARSP26639 723 aaKnown RBP7.67□□□□□ -1.18
HPS3-205ENST00000478525 GPLD1P80108 840 aa7.67□□□□□ -1.18
HPS3-205ENST00000478525 PCSK7Q16549 785 aa7.67□□□□□ -1.18
HPS3-205ENST00000478525 FBXO11Q86XK2 927 aa7.67□□□□□ -1.18
HPS3-205ENST00000478525 ARXQ96QS3 562 aa7.67□□□□□ -1.18
HPS3-205ENST00000478525 SASH3O75995 380 aa7.66□□□□□ -1.18
HPS3-205ENST00000478525 NOS3P29474 1203 aa7.66□□□□□ -1.18
HPS3-205ENST00000478525 ELMSAN1Q6PJG2 1045 aa7.66□□□□□ -1.18
HPS3-205ENST00000478525 NBPF11Q86T75 865 aa7.66□□□□□ -1.18
HPS3-205ENST00000478525 WFDC8Q8IUA0 241 aa7.66□□□□□ -1.18
HPS3-205ENST00000478525 WFDC12Q8WWY7 111 aa7.66□□□□□ -1.18
HPS3-205ENST00000478525 FOXO3O43524 673 aa7.65□□□□□ -1.18
HPS3-205ENST00000478525 MICAL2O94851 1124 aa7.65□□□□□ -1.18
HPS3-205ENST00000478525 WEE1P30291 646 aa7.65□□□□□ -1.18
HPS3-205ENST00000478525 IREB2P48200 963 aaKnown RBP7.65□□□□□ -1.18
HPS3-205ENST00000478525 MYO19Q96H55 970 aa7.65□□□□□ -1.18
HPS3-205ENST00000478525 CALR3Q96L12 384 aaKnown RBP7.65□□□□□ -1.18
HPS3-205ENST00000478525 USP20Q9Y2K6 914 aa7.65□□□□□ -1.18
HPS3-205ENST00000478525 HYAL3O43820 417 aaPredicted RBP7.64□□□□□ -1.19
HPS3-205ENST00000478525 DEAF1O75398 565 aaPredicted RBP7.64□□□□□ -1.19
HPS3-205ENST00000478525 HFE2Q6ZVN8 426 aa7.64□□□□□ -1.19
HPS3-205ENST00000478525 TTC9Q92623 222 aa7.64□□□□□ -1.19
HPS3-205ENST00000478525 MEGF10Q96KG7 1140 aa7.64□□□□□ -1.19
HPS3-205ENST00000478525 SMG9Q9H0W8 520 aaKnown RBP7.64□□□□□ -1.19
HPS3-205ENST00000478525 C11orf16Q9NQ32 467 aa7.64□□□□□ -1.19
HPS3-205ENST00000478525 EIF2AK2P19525 551 aaKnown RBP7.63□□□□□ -1.19
HPS3-205ENST00000478525 LMOD1P29536 600 aaPredicted RBP7.63□□□□□ -1.19
HPS3-205ENST00000478525 NRLP54845 237 aa7.63□□□□□ -1.19
HPS3-205ENST00000478525 C11orf91Q3C1V1 193 aa7.63□□□□□ -1.19
HPS3-205ENST00000478525 VRTNQ9H8Y1 702 aa7.63□□□□□ -1.19
HPS3-205ENST00000478525 OPLAHO14841 1288 aa7.62□□□□□ -1.19
HPS3-205ENST00000478525 IGF2-ASQ6U949 168 aa7.62□□□□□ -1.19
HPS3-205ENST00000478525 VTI1AQ96AJ9 217 aa7.62□□□□□ -1.19
HPS3-205ENST00000478525 LRFN2Q9ULH4 789 aa7.62□□□□□ -1.19
HPS3-205ENST00000478525 RTCBQ9Y3I0 505 aaKnown RBP7.62□□□□□ -1.19
HPS3-205ENST00000478525 TLR7Q9NYK1 1049 aaKnown RBP7.61□□□□□ -1.19
HPS3-205ENST00000478525 DLL1O00548 723 aa7.6□□□□□ -1.19
HPS3-205ENST00000478525 EGFRP00533 1210 aa7.6□□□□□ -1.19
HPS3-205ENST00000478525 RGL4Q8IZJ4 473 aa7.6□□□□□ -1.19
HPS3-205ENST00000478525 J3QW42 95 aa7.59□□□□□ -1.19
HPS3-205ENST00000478525 XYLBO75191 536 aa7.59□□□□□ -1.19
HPS3-205ENST00000478525 ARID4AP29374 1257 aaPredicted RBP7.59□□□□□ -1.19
HPS3-205ENST00000478525 TREML1Q86YW5 311 aa7.59□□□□□ -1.19
HPS3-205ENST00000478525 PLD4Q96BZ4 506 aa7.59□□□□□ -1.19
HPS3-205ENST00000478525 NSUN5Q96P11 429 aaKnown RBP7.59□□□□□ -1.19
HPS3-205ENST00000478525 A6NJR5 290 aa7.58□□□□□ -1.2
HPS3-205ENST00000478525 MMP20O60882 483 aa7.58□□□□□ -1.2
HPS3-205ENST00000478525 FKBP5Q13451 457 aaPredicted RBP7.58□□□□□ -1.2
HPS3-205ENST00000478525 CFAP70Q5T0N1 1121 aa7.58□□□□□ -1.2
HPS3-205ENST00000478525 PRR23CQ6ZRP0 262 aa7.58□□□□□ -1.2
HPS3-205ENST00000478525 CMTR1Q8N1G2 835 aaKnown RBP7.58□□□□□ -1.2
HPS3-205ENST00000478525 KRTAP4-12Q9BQ66 201 aa7.58□□□□□ -1.2
HPS3-205ENST00000478525 RNF112Q9ULX5 631 aa7.58□□□□□ -1.2
HPS3-205ENST00000478525 KCNMB2Q9Y691 235 aa7.58□□□□□ -1.2
HPS3-205ENST00000478525 ALX3O95076 343 aa7.57□□□□□ -1.2
HPS3-205ENST00000478525 COX20Q5RI15 118 aa7.57□□□□□ -1.2
HPS3-205ENST00000478525 GDF6Q6KF10 455 aaPredicted RBP7.57□□□□□ -1.2
HPS3-205ENST00000478525 FAM200AQ8TCP9 573 aa7.57□□□□□ -1.2
HPS3-205ENST00000478525 AKTIPQ9H8T0 292 aa7.57□□□□□ -1.2
HPS3-205ENST00000478525 LOC102724428A0A0B4J2F2 783 aa7.56□□□□□ -1.2
HPS3-205ENST00000478525 PSAPP07602 524 aa7.56□□□□□ -1.2
HPS3-205ENST00000478525 HOXD8P13378 290 aaPredicted RBP7.56□□□□□ -1.2
HPS3-205ENST00000478525 SIK1P57059 783 aa7.56□□□□□ -1.2
HPS3-205ENST00000478525 DZIP1LQ8IYY4 767 aaKnown RBP7.56□□□□□ -1.2
HPS3-205ENST00000478525 F8W735 103 aaPredicted RBP7.55□□□□□ -1.2
HPS3-205ENST00000478525 GHRHP01286 108 aa7.55□□□□□ -1.2
HPS3-205ENST00000478525 SOX18P35713 384 aa7.55□□□□□ -1.2
HPS3-205ENST00000478525 TRIP4Q15650 581 aaPredicted RBP7.55□□□□□ -1.2
HPS3-205ENST00000478525 CDCA8Q53HL2 280 aa7.55□□□□□ -1.2
HPS3-205ENST00000478525 IL22RA1Q8N6P7 574 aa7.55□□□□□ -1.2
HPS3-205ENST00000478525 MRPL18Q9H0U6 180 aaKnown RBP7.55□□□□□ -1.2
HPS3-205ENST00000478525 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.55□□□□□ -1.2
HPS3-205ENST00000478525 SETDB1Q15047 1291 aa7.54□□□□□ -1.2
HPS3-205ENST00000478525 ETFBKMTQ8IXQ9 262 aa7.54□□□□□ -1.2
HPS3-205ENST00000478525 NOVA2Q9UNW9 492 aaKnown RBP7.54□□□□□ -1.2
HPS3-205ENST00000478525 TRIM33Q9UPN9 1127 aa7.54□□□□□ -1.2
HPS3-205ENST00000478525 FSTP19883 344 aa7.53□□□□□ -1.2
HPS3-205ENST00000478525 FAM26DQ5JW98 314 aa7.53□□□□□ -1.2
HPS3-205ENST00000478525 Q6ZS46 218 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms