RNA–Protein interactions for RNA: ENST00000478440.1

ITGA4-209, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best)

Gene ITGA4, Length 1,144 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-209ENST00000478440 TMEM88BA6NKF7 163 aa9.98□□□□□ -0.81
ITGA4-209ENST00000478440 MAP3K6O95382 1288 aa9.98□□□□□ -0.81
ITGA4-209ENST00000478440 NAA30Q147X3 362 aaPredicted RBP9.98□□□□□ -0.81
ITGA4-209ENST00000478440 RAB44Q7Z6P3 723 aaPredicted RBP9.98□□□□□ -0.81
ITGA4-209ENST00000478440 UBE2OQ9C0C9 1292 aaKnown RBP9.98□□□□□ -0.81
ITGA4-209ENST00000478440 STIM2Q9P246 746 aa9.98□□□□□ -0.81
ITGA4-209ENST00000478440 RTCBQ9Y3I0 505 aaKnown RBP9.98□□□□□ -0.81
ITGA4-209ENST00000478440 SPDYE3A6NKU9 549 aa9.97□□□□□ -0.81
ITGA4-209ENST00000478440 PIK3R5Q8WYR1 880 aa9.97□□□□□ -0.81
ITGA4-209ENST00000478440 SAP130Q9H0E3 1048 aa9.97□□□□□ -0.81
ITGA4-209ENST00000478440 BAZ1BQ9UIG0 1483 aaKnown RBP9.97□□□□□ -0.81
ITGA4-209ENST00000478440 NESP48681 1621 aa9.96□□□□□ -0.81
ITGA4-209ENST00000478440 OPLAHO14841 1288 aa9.96□□□□□ -0.82
ITGA4-209ENST00000478440 EGFRP00533 1210 aa9.96□□□□□ -0.82
ITGA4-209ENST00000478440 NFKB1P19838 968 aa9.96□□□□□ -0.82
ITGA4-209ENST00000478440 SSFA2P28290 1259 aa9.96□□□□□ -0.82
ITGA4-209ENST00000478440 LINC00114Q6XXX2 140 aa9.96□□□□□ -0.82
ITGA4-209ENST00000478440 ARID3AQ99856 593 aa9.96□□□□□ -0.82
ITGA4-209ENST00000478440 SLAIN2Q9P270 581 aa9.96□□□□□ -0.82
ITGA4-209ENST00000478440 ETFBKMTQ8IXQ9 262 aa9.95□□□□□ -0.82
ITGA4-209ENST00000478440 RGL4Q8IZJ4 473 aa9.95□□□□□ -0.82
ITGA4-209ENST00000478440 CMTR1Q8N1G2 835 aaKnown RBP9.95□□□□□ -0.82
ITGA4-209ENST00000478440 PRDM6Q9NQX0 595 aa9.95□□□□□ -0.82
ITGA4-209ENST00000478440 FNDC3AQ9Y2H6 1198 aaKnown RBP9.95□□□□□ -0.82
ITGA4-209ENST00000478440 TNFRSF10BO14763 440 aa9.94□□□□□ -0.82
ITGA4-209ENST00000478440 XYLBO75191 536 aa9.94□□□□□ -0.82
ITGA4-209ENST00000478440 HOXB4P17483 251 aaPredicted RBP9.94□□□□□ -0.82
ITGA4-209ENST00000478440 TBC1D8BQ0IIM8 1120 aa9.94□□□□□ -0.82
ITGA4-209ENST00000478440 HELQQ8TDG4 1101 aa9.94□□□□□ -0.82
ITGA4-209ENST00000478440 IGFLR1Q9H665 355 aa9.94□□□□□ -0.82
ITGA4-209ENST00000478440 BAZ1AQ9NRL2 1556 aaPredicted RBP9.93□□□□□ -0.82
ITGA4-209ENST00000478440 RPLP1P05386 114 aaKnown RBP9.93□□□□□ -0.82
ITGA4-209ENST00000478440 RARAP10276 462 aa9.93□□□□□ -0.82
ITGA4-209ENST00000478440 CAPN12Q6ZSI9 719 aa9.93□□□□□ -0.82
ITGA4-209ENST00000478440 DNAJB12Q9NXW2 375 aaKnown RBP9.93□□□□□ -0.82
ITGA4-209ENST00000478440 SLC6A14Q9UN76 642 aa9.93□□□□□ -0.82
ITGA4-209ENST00000478440 GRNP28799 593 aaKnown RBP9.92□□□□□ -0.82
ITGA4-209ENST00000478440 ZAP70P43403 619 aa9.92□□□□□ -0.82
ITGA4-209ENST00000478440 DCAF5Q96JK2 942 aa9.92□□□□□ -0.82
ITGA4-209ENST00000478440 SEPT3Q9UH03 358 aa9.92□□□□□ -0.82
ITGA4-209ENST00000478440 KIF21AQ7Z4S6 1674 aa9.92□□□□□ -0.82
ITGA4-209ENST00000478440 M0R082 166 aa9.91□□□□□ -0.82
ITGA4-209ENST00000478440 SASH3O75995 380 aa9.91□□□□□ -0.82
ITGA4-209ENST00000478440 LCE3BQ5TA77 95 aa9.91□□□□□ -0.82
ITGA4-209ENST00000478440 DHX32Q7L7V1 743 aaKnown RBP9.91□□□□□ -0.82
ITGA4-209ENST00000478440 KRT25Q7Z3Z0 450 aa9.91□□□□□ -0.82
ITGA4-209ENST00000478440 ZNF417Q8TAU3 575 aa9.91□□□□□ -0.82
ITGA4-209ENST00000478440 ZNF587Q96SQ5 575 aaPredicted RBP9.91□□□□□ -0.82
ITGA4-209ENST00000478440 THOC2Q8NI27 1593 aaKnown RBP9.9□□□□□ -0.82
ITGA4-209ENST00000478440 LAMC3Q9Y6N6 1575 aa9.9□□□□□ -0.82
ITGA4-209ENST00000478440 LILRB5O75023 590 aa9.9□□□□□ -0.82
ITGA4-209ENST00000478440 PCSK2P16519 638 aa9.9□□□□□ -0.82
ITGA4-209ENST00000478440 TARSP26639 723 aaKnown RBP9.9□□□□□ -0.82
ITGA4-209ENST00000478440 ALKBH2Q6NS38 261 aa9.9□□□□□ -0.82
ITGA4-209ENST00000478440 MICALL1Q8N3F8 863 aa9.9□□□□□ -0.82
ITGA4-209ENST00000478440 TRPM4Q8TD43 1214 aa9.9□□□□□ -0.82
ITGA4-209ENST00000478440 KCNMB2Q9Y691 235 aa9.9□□□□□ -0.82
ITGA4-209ENST00000478440 PSAPP07602 524 aa9.89□□□□□ -0.83
ITGA4-209ENST00000478440 NRLP54845 237 aa9.89□□□□□ -0.83
ITGA4-209ENST00000478440 TLR7Q9NYK1 1049 aaKnown RBP9.89□□□□□ -0.83
ITGA4-209ENST00000478440 STARD13Q9Y3M8 1113 aa9.89□□□□□ -0.83
ITGA4-209ENST00000478440 UBAP1LF5GYI3 381 aa9.88□□□□□ -0.83
ITGA4-209ENST00000478440 ALBP02768 609 aa9.88□□□□□ -0.83
ITGA4-209ENST00000478440 GPLD1P80108 840 aa9.88□□□□□ -0.83
ITGA4-209ENST00000478440 PLAURQ03405 335 aa9.88□□□□□ -0.83
ITGA4-209ENST00000478440 PRRT3Q5FWE3 981 aa9.88□□□□□ -0.83
ITGA4-209ENST00000478440 NLRP13Q86W25 1043 aa9.88□□□□□ -0.83
ITGA4-209ENST00000478440 Q8N3U1 123 aa9.88□□□□□ -0.83
ITGA4-209ENST00000478440 TTC16Q8NEE8 873 aa9.88□□□□□ -0.83
ITGA4-209ENST00000478440 GTF3C2Q8WUA4 911 aaPredicted RBP9.88□□□□□ -0.83
ITGA4-209ENST00000478440 FRRS1LQ9P0K9 344 aa9.88□□□□□ -0.83
ITGA4-209ENST00000478440 ZFATQ9P243 1243 aa9.88□□□□□ -0.83
ITGA4-209ENST00000478440 RGS9O75916 674 aaPredicted RBP9.87□□□□□ -0.83
ITGA4-209ENST00000478440 SOX18P35713 384 aa9.87□□□□□ -0.83
ITGA4-209ENST00000478440 SF3B2Q13435 895 aaKnown RBP9.87□□□□□ -0.83
ITGA4-209ENST00000478440 NOM1Q5C9Z4 860 aaKnown RBP9.87□□□□□ -0.83
ITGA4-209ENST00000478440 FAM35AQ86V20 835 aa9.87□□□□□ -0.83
ITGA4-209ENST00000478440 PLVAPQ9BX97 442 aa9.87□□□□□ -0.83
ITGA4-209ENST00000478440 RBSNQ9H1K0 784 aa9.87□□□□□ -0.83
ITGA4-209ENST00000478440 JPH1Q9HDC5 661 aaPredicted RBP9.87□□□□□ -0.83
ITGA4-209ENST00000478440 USP20Q9Y2K6 914 aa9.87□□□□□ -0.83
ITGA4-209ENST00000478440 FAM13AO94988 1023 aa9.86□□□□□ -0.83
ITGA4-209ENST00000478440 PSAPL1Q6NUJ1 521 aa9.86□□□□□ -0.83
ITGA4-209ENST00000478440 C20orf204Q6ZNR8 217 aa9.86□□□□□ -0.83
ITGA4-209ENST00000478440 GPR152Q8TDT2 470 aa9.86□□□□□ -0.83
ITGA4-209ENST00000478440 SPATA31C1P0DKV0 1188 aa9.85□□□□□ -0.83
ITGA4-209ENST00000478440 HOXD8P13378 290 aaPredicted RBP9.85□□□□□ -0.83
ITGA4-209ENST00000478440 COL8A1P27658 744 aa9.85□□□□□ -0.83
ITGA4-209ENST00000478440 TRIM11Q96F44 468 aa9.85□□□□□ -0.83
ITGA4-209ENST00000478440 SUV39H2Q9H5I1 410 aa9.85□□□□□ -0.83
ITGA4-209ENST00000478440 PDS5BQ9NTI5 1447 aa9.84□□□□□ -0.83
ITGA4-209ENST00000478440 MSTNO14793 375 aa9.84□□□□□ -0.83
ITGA4-209ENST00000478440 TTC39BQ5VTQ0 682 aaPredicted RBP9.84□□□□□ -0.83
ITGA4-209ENST00000478440 PDE12Q6L8Q7 609 aaKnown RBP9.84□□□□□ -0.83
ITGA4-209ENST00000478440 ELMSAN1Q6PJG2 1045 aa9.84□□□□□ -0.83
ITGA4-209ENST00000478440 TTC9Q92623 222 aa9.84□□□□□ -0.83
ITGA4-209ENST00000478440 CPB1P15086 417 aa9.83□□□□□ -0.84
ITGA4-209ENST00000478440 TRIM28Q13263 835 aaKnown RBP9.83□□□□□ -0.84
ITGA4-209ENST00000478440 FAM26DQ5JW98 314 aa9.83□□□□□ -0.84
ITGA4-209ENST00000478440 PEG3Q9GZU2 1588 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms