RNA–Protein interactions for RNA: ENST00000478282.1

U2AF1-210, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 2

Gene U2AF1, Length 3,344 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-210ENST00000478282 SCAND2PQ9GZW5 306 aaPredicted RBP17.61■□□□□ 0.41
U2AF1-210ENST00000478282 NRBP1Q9UHY1 535 aa17.61■□□□□ 0.41
U2AF1-210ENST00000478282 DDX54Q8TDD1 881 aaKnown RBP17.61■□□□□ 0.41
U2AF1-210ENST00000478282 ECHDC1Q9NTX5 307 aa17.61■□□□□ 0.41
U2AF1-210ENST00000478282 NWD2Q9ULI1 1742 aa17.61■□□□□ 0.41
U2AF1-210ENST00000478282 TNNT1P13805 278 aa17.6■□□□□ 0.41
U2AF1-210ENST00000478282 PIP4K2BP78356 416 aa17.6■□□□□ 0.41
U2AF1-210ENST00000478282 CREB3L3Q68CJ9 461 aa17.6■□□□□ 0.41
U2AF1-210ENST00000478282 CLASRPQ8N2M8 674 aaKnown RBP17.6■□□□□ 0.41
U2AF1-210ENST00000478282 CLSTN2Q9H4D0 955 aa17.6■□□□□ 0.41
U2AF1-210ENST00000478282 RBM8AQ9Y5S9 174 aaKnown RBP17.6■□□□□ 0.41
U2AF1-210ENST00000478282 PLEKHG2Q9H7P9 1386 aa17.6■□□□□ 0.41
U2AF1-210ENST00000478282 BEND3Q5T5X7 828 aa17.6■□□□□ 0.41
U2AF1-210ENST00000478282 PAXBP1Q9Y5B6 917 aa17.6■□□□□ 0.41
U2AF1-210ENST00000478282 GOLGA6L4A6NEF3 574 aa17.6■□□□□ 0.41
U2AF1-210ENST00000478282 CTNNA3Q9UI47 895 aa17.6■□□□□ 0.41
U2AF1-210ENST00000478282 GPATCH3Q96I76 525 aa17.59■□□□□ 0.41
U2AF1-210ENST00000478282 SPATA32Q96LK8 384 aa17.59■□□□□ 0.41
U2AF1-210ENST00000478282 COL5A2P05997 1499 aaPredicted RBP17.59■□□□□ 0.41
U2AF1-210ENST00000478282 PSMA5P28066 241 aa17.59■□□□□ 0.41
U2AF1-210ENST00000478282 DNAAF4Q8WXU2 420 aa17.59■□□□□ 0.41
U2AF1-210ENST00000478282 EVI5LQ96CN4 794 aa17.59■□□□□ 0.41
U2AF1-210ENST00000478282 CGNQ9P2M7 1197 aaKnown RBP17.59■□□□□ 0.41
U2AF1-210ENST00000478282 LEO1Q8WVC0 666 aaPredicted RBP17.58■□□□□ 0.41
U2AF1-210ENST00000478282 JCADQ9P266 1359 aa17.58■□□□□ 0.4
U2AF1-210ENST00000478282 ERBB3P21860 1342 aa17.58■□□□□ 0.4
U2AF1-210ENST00000478282 CCDC112Q8NEF3 446 aa17.58■□□□□ 0.4
U2AF1-210ENST00000478282 KCNJ4P48050 445 aa17.57■□□□□ 0.4
U2AF1-210ENST00000478282 MTX1Q13505 466 aa17.57■□□□□ 0.4
U2AF1-210ENST00000478282 MAP4K1Q92918 833 aa17.57■□□□□ 0.4
U2AF1-210ENST00000478282 ZNF165P49910 485 aa17.57■□□□□ 0.4
U2AF1-210ENST00000478282 PODXL2Q9NZ53 605 aa17.57■□□□□ 0.4
U2AF1-210ENST00000478282 CLIP2Q9UDT6 1046 aa17.57■□□□□ 0.4
U2AF1-210ENST00000478282 PI4KAP2A4QPH2 592 aa17.57■□□□□ 0.4
U2AF1-210ENST00000478282 SLC27A2O14975 620 aa17.57■□□□□ 0.4
U2AF1-210ENST00000478282 ZC3H6P61129 1189 aaKnown RBP17.57■□□□□ 0.4
U2AF1-210ENST00000478282 ANKRD1Q15327 319 aa17.57■□□□□ 0.4
U2AF1-210ENST00000478282 PI4KAP1Q8N8J0 262 aa17.57■□□□□ 0.4
U2AF1-210ENST00000478282 CACTINQ8WUQ7 758 aaKnown RBP17.57■□□□□ 0.4
U2AF1-210ENST00000478282 TFIP11Q9UBB9 837 aaKnown RBP17.57■□□□□ 0.4
U2AF1-210ENST00000478282 IFIT2P09913 472 aaKnown RBP17.56■□□□□ 0.4
U2AF1-210ENST00000478282 EIF2S2P20042 333 aaKnown RBP17.56■□□□□ 0.4
U2AF1-210ENST00000478282 CDC25BP30305 580 aa17.56■□□□□ 0.4
U2AF1-210ENST00000478282 TPD52L1Q16890 204 aaPredicted RBP17.56■□□□□ 0.4
U2AF1-210ENST00000478282 COL9A3Q14050 684 aaPredicted RBP17.55■□□□□ 0.4
U2AF1-210ENST00000478282 LARP1Q6PKG0 1096 aaKnown RBP17.55■□□□□ 0.4
U2AF1-210ENST00000478282 DNAJC25Q9H1X3 360 aa17.55■□□□□ 0.4
U2AF1-210ENST00000478282 DDX41Q9UJV9 622 aaKnown RBP17.55■□□□□ 0.4
U2AF1-210ENST00000478282 WNK3Q9BYP7 1800 aa17.55■□□□□ 0.4
U2AF1-210ENST00000478282 HIP1O00291 1037 aa17.55■□□□□ 0.4
U2AF1-210ENST00000478282 NR1I2O75469 434 aa17.55■□□□□ 0.4
U2AF1-210ENST00000478282 GABPB1Q06547 395 aaPredicted RBP17.55■□□□□ 0.4
U2AF1-210ENST00000478282 BLOC1S2Q6QNY1 142 aa17.55■□□□□ 0.4
U2AF1-210ENST00000478282 FAM227BQ96M60 508 aa17.55■□□□□ 0.4
U2AF1-210ENST00000478282 ALDH8A1Q9H2A2 487 aaPredicted RBP17.55■□□□□ 0.4
U2AF1-210ENST00000478282 CHPF2Q9P2E5 772 aa17.55■□□□□ 0.4
U2AF1-210ENST00000478282 CAVIN2O95810 425 aa17.55■□□□□ 0.4
U2AF1-210ENST00000478282 CCDC144BQ3MJ40 725 aa17.55■□□□□ 0.4
U2AF1-210ENST00000478282 ERC1Q8IUD2 1116 aa17.55■□□□□ 0.4
U2AF1-210ENST00000478282 CCDC144CPQ8IYA2 1237 aa17.55■□□□□ 0.4
U2AF1-210ENST00000478282 SNRKQ9NRH2 765 aa17.55■□□□□ 0.4
U2AF1-210ENST00000478282 PKD1L3Q7Z443 1732 aa17.55■□□□□ 0.4
U2AF1-210ENST00000478282 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.54■□□□□ 0.4
U2AF1-210ENST00000478282 IGSF3O75054 1194 aa17.54■□□□□ 0.4
U2AF1-210ENST00000478282 NMIQ13287 307 aaPredicted RBP17.54■□□□□ 0.4
U2AF1-210ENST00000478282 NAA30Q147X3 362 aaPredicted RBP17.54■□□□□ 0.4
U2AF1-210ENST00000478282 BICD2Q8TD16 824 aa17.54■□□□□ 0.4
U2AF1-210ENST00000478282 PGBD1Q96JS3 809 aa17.54■□□□□ 0.4
U2AF1-210ENST00000478282 HOXB7P09629 217 aa17.54■□□□□ 0.4
U2AF1-210ENST00000478282 RPS6KB1P23443 525 aa17.54■□□□□ 0.4
U2AF1-210ENST00000478282 ANKRD24Q8TF21 1146 aa17.54■□□□□ 0.4
U2AF1-210ENST00000478282 SLIT2O94813 1529 aa17.53■□□□□ 0.4
U2AF1-210ENST00000478282 ADCY9O60503 1353 aa17.53■□□□□ 0.4
U2AF1-210ENST00000478282 NBPF6Q5VWK0 638 aa17.53■□□□□ 0.4
U2AF1-210ENST00000478282 CEP135Q66GS9 1140 aa17.53■□□□□ 0.4
U2AF1-210ENST00000478282 NBPF4Q96M43 638 aa17.53■□□□□ 0.4
U2AF1-210ENST00000478282 ADAMTS7Q9UKP4 1686 aa17.53■□□□□ 0.4
U2AF1-210ENST00000478282 EIF4A1P60842 406 aaKnown RBP17.53■□□□□ 0.4
U2AF1-210ENST00000478282 TOB2Q14106 344 aaPredicted RBP17.53■□□□□ 0.4
U2AF1-210ENST00000478282 RNF20Q5VTR2 975 aa17.53■□□□□ 0.4
U2AF1-210ENST00000478282 TCEANC2Q96MN5 208 aa17.53■□□□□ 0.4
U2AF1-210ENST00000478282 LRP6O75581 1613 aa17.53■□□□□ 0.4
U2AF1-210ENST00000478282 AACSQ86V21 672 aa17.52■□□□□ 0.4
U2AF1-210ENST00000478282 MORC2Q9Y6X9 1032 aaPredicted RBP17.52■□□□□ 0.4
U2AF1-210ENST00000478282 KDM3BQ7LBC6 1761 aa17.52■□□□□ 0.4
U2AF1-210ENST00000478282 SPATA31A6Q5VVP1 1343 aa17.52■□□□□ 0.4
U2AF1-210ENST00000478282 CEMIPQ8WUJ3 1361 aa17.52■□□□□ 0.4
U2AF1-210ENST00000478282 SARM1Q6SZW1 724 aa17.52■□□□□ 0.4
U2AF1-210ENST00000478282 ZNF771Q7L3S4 317 aaPredicted RBP17.52■□□□□ 0.4
U2AF1-210ENST00000478282 GIGYF1O75420 1035 aaPredicted RBP17.52■□□□□ 0.39
U2AF1-210ENST00000478282 CHMP4AQ9BY43 222 aa17.52■□□□□ 0.39
U2AF1-210ENST00000478282 PA2G4Q9UQ80 394 aaKnown RBP17.52■□□□□ 0.39
U2AF1-210ENST00000478282 LRRC8AQ8IWT6 810 aa17.51■□□□□ 0.39
U2AF1-210ENST00000478282 PARP4Q9UKK3 1724 aaKnown RBP17.51■□□□□ 0.39
U2AF1-210ENST00000478282 NEMFO60524 1076 aa17.51■□□□□ 0.39
U2AF1-210ENST00000478282 RBM6P78332 1123 aaKnown RBP17.51■□□□□ 0.39
U2AF1-210ENST00000478282 KIF18AQ8NI77 898 aa17.51■□□□□ 0.39
U2AF1-210ENST00000478282 IQCB1Q15051 598 aa17.5■□□□□ 0.39
U2AF1-210ENST00000478282 TAF3Q5VWG9 929 aa17.5■□□□□ 0.39
U2AF1-210ENST00000478282 MED23Q9ULK4 1368 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms