RNA–Protein interactions for RNA: ENST00000478250.1

NR4A1-205, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best)

Gene NR4A1, Length 1,820 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-205ENST00000478250 NSFL1CQ9UNZ2 370 aaKnown RBP17.52■□□□□ 0.4
NR4A1-205ENST00000478250 ZSCAN20P17040 1043 aaPredicted RBP17.51■□□□□ 0.39
NR4A1-205ENST00000478250 FAM98CQ17RN3 349 aaKnown RBP17.51■□□□□ 0.39
NR4A1-205ENST00000478250 ANKRD13DQ6ZTN6 518 aa17.51■□□□□ 0.39
NR4A1-205ENST00000478250 BICC1Q9H694 974 aaKnown RBP17.51■□□□□ 0.39
NR4A1-205ENST00000478250 DISP2A7MBM2 1401 aa17.51■□□□□ 0.39
NR4A1-205ENST00000478250 OS9Q13438 667 aaPredicted RBP17.51■□□□□ 0.39
NR4A1-205ENST00000478250 IL17RAQ96F46 866 aa17.51■□□□□ 0.39
NR4A1-205ENST00000478250 CHAMP1Q96JM3 812 aa17.51■□□□□ 0.39
NR4A1-205ENST00000478250 RGS17Q9UGC6 210 aaPredicted RBP17.51■□□□□ 0.39
NR4A1-205ENST00000478250 TPM3P06753 285 aa17.5■□□□□ 0.39
NR4A1-205ENST00000478250 CLASRPQ8N2M8 674 aaKnown RBP17.5■□□□□ 0.39
NR4A1-205ENST00000478250 PIBF1Q8WXW3 757 aa17.5■□□□□ 0.39
NR4A1-205ENST00000478250 MYD88Q99836 296 aa17.5■□□□□ 0.39
NR4A1-205ENST00000478250 RBM6P78332 1123 aaKnown RBP17.49■□□□□ 0.39
NR4A1-205ENST00000478250 PALD1Q9ULE6 856 aa17.49■□□□□ 0.39
NR4A1-205ENST00000478250 A0A0G2JS52 829 aa17.49■□□□□ 0.39
NR4A1-205ENST00000478250 GLRX3O76003 335 aaKnown RBP17.49■□□□□ 0.39
NR4A1-205ENST00000478250 CNTROBQ8N137 903 aa17.48■□□□□ 0.39
NR4A1-205ENST00000478250 PLBD2Q8NHP8 589 aa17.48■□□□□ 0.39
NR4A1-205ENST00000478250 PA2G4Q9UQ80 394 aaKnown RBP17.48■□□□□ 0.39
NR4A1-205ENST00000478250 TJP1Q07157 1748 aa17.48■□□□□ 0.39
NR4A1-205ENST00000478250 WNK3Q9BYP7 1800 aa17.48■□□□□ 0.39
NR4A1-205ENST00000478250 EXOC5O00471 708 aa17.47■□□□□ 0.39
NR4A1-205ENST00000478250 FGD1P98174 961 aa17.47■□□□□ 0.39
NR4A1-205ENST00000478250 GPATCH3Q96I76 525 aa17.47■□□□□ 0.39
NR4A1-205ENST00000478250 ONECUT3O60422 494 aaPredicted RBP17.47■□□□□ 0.39
NR4A1-205ENST00000478250 RXRBP28702 533 aa17.47■□□□□ 0.39
NR4A1-205ENST00000478250 DDB1Q16531 1140 aa17.47■□□□□ 0.39
NR4A1-205ENST00000478250 CCDC183Q5T5S1 534 aa17.47■□□□□ 0.39
NR4A1-205ENST00000478250 ECHDC1Q9NTX5 307 aa17.47■□□□□ 0.39
NR4A1-205ENST00000478250 SPTLC3Q9NUV7 552 aa17.47■□□□□ 0.39
NR4A1-205ENST00000478250 NBPF26B4DH59 902 aa17.46■□□□□ 0.39
NR4A1-205ENST00000478250 NBPF14Q5TI25 921 aa17.46■□□□□ 0.39
NR4A1-205ENST00000478250 NBPF10Q6P3W6 841 aaKnown RBP17.46■□□□□ 0.39
NR4A1-205ENST00000478250 ILDR2Q71H61 639 aa17.46■□□□□ 0.39
NR4A1-205ENST00000478250 NBPF15Q8N660 670 aa17.46■□□□□ 0.39
NR4A1-205ENST00000478250 DDX54Q8TDD1 881 aaKnown RBP17.46■□□□□ 0.39
NR4A1-205ENST00000478250 DIAPH3Q9NSV4 1193 aa17.46■□□□□ 0.39
NR4A1-205ENST00000478250 SASH1O94885 1247 aa17.45■□□□□ 0.38
NR4A1-205ENST00000478250 PIP4K2AP48426 406 aaPredicted RBP17.45■□□□□ 0.38
NR4A1-205ENST00000478250 RABL6Q3YEC7 729 aaPredicted RBP17.45■□□□□ 0.38
NR4A1-205ENST00000478250 POTEAQ6S8J7 498 aa17.45■□□□□ 0.38
NR4A1-205ENST00000478250 USP48Q86UV5 1035 aa17.45■□□□□ 0.38
NR4A1-205ENST00000478250 FEZ1Q99689 392 aa17.45■□□□□ 0.38
NR4A1-205ENST00000478250 UPF3BQ9BZI7 483 aaKnown RBP17.45■□□□□ 0.38
NR4A1-205ENST00000478250 KIF3AQ9Y496 699 aa17.45■□□□□ 0.38
NR4A1-205ENST00000478250 SGSM2O43147 1006 aa17.44■□□□□ 0.38
NR4A1-205ENST00000478250 IFIT2P09913 472 aaKnown RBP17.44■□□□□ 0.38
NR4A1-205ENST00000478250 G3BP1Q13283 466 aaKnown RBP eCLIP17.44■□□□□ 0.38
NR4A1-205ENST00000478250 TMEM87AQ8NBN3 555 aa17.44■□□□□ 0.38
NR4A1-205ENST00000478250 HSPA4P34932 840 aa17.44■□□□□ 0.38
NR4A1-205ENST00000478250 SYCP1Q15431 976 aa17.44■□□□□ 0.38
NR4A1-205ENST00000478250 FOXD4L6Q3SYB3 417 aaPredicted RBP17.44■□□□□ 0.38
NR4A1-205ENST00000478250 EPHA10Q5JZY3 1008 aa17.44■□□□□ 0.38
NR4A1-205ENST00000478250 DNTTIP2Q5QJE6 756 aaKnown RBP17.44■□□□□ 0.38
NR4A1-205ENST00000478250 FOXD4L3Q6VB84 417 aaPredicted RBP17.44■□□□□ 0.38
NR4A1-205ENST00000478250 SEPT12Q8IYM1 358 aa17.44■□□□□ 0.38
NR4A1-205ENST00000478250 COPRSQ9NQ92 184 aa17.44■□□□□ 0.38
NR4A1-205ENST00000478250 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.44■□□□□ 0.38
NR4A1-205ENST00000478250 THSD7AQ9UPZ6 1657 aa17.43■□□□□ 0.38
NR4A1-205ENST00000478250 RAD50Q92878 1312 aa17.43■□□□□ 0.38
NR4A1-205ENST00000478250 CASP7P55210 303 aa17.43■□□□□ 0.38
NR4A1-205ENST00000478250 AACSQ86V21 672 aa17.43■□□□□ 0.38
NR4A1-205ENST00000478250 IL25Q9H293 177 aa17.43■□□□□ 0.38
NR4A1-205ENST00000478250 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.43■□□□□ 0.38
NR4A1-205ENST00000478250 ATP6V1DQ9Y5K8 247 aa17.43■□□□□ 0.38
NR4A1-205ENST00000478250 ITGB4P16144 1822 aa17.42■□□□□ 0.38
NR4A1-205ENST00000478250 GADD45BO75293 160 aaPredicted RBP17.42■□□□□ 0.38
NR4A1-205ENST00000478250 MAP4K4O95819 1239 aaPredicted RBP17.42■□□□□ 0.38
NR4A1-205ENST00000478250 GDPD2Q9HCC8 539 aa17.42■□□□□ 0.38
NR4A1-205ENST00000478250 RFX5P48382 616 aaPredicted RBP17.42■□□□□ 0.38
NR4A1-205ENST00000478250 CHAF1AQ13111 956 aaPredicted RBP17.42■□□□□ 0.38
NR4A1-205ENST00000478250 RPAP1Q9BWH6 1393 aaPredicted RBP17.41■□□□□ 0.38
NR4A1-205ENST00000478250 ZSCAN22P10073 491 aaPredicted RBP17.41■□□□□ 0.38
NR4A1-205ENST00000478250 UBE3BQ7Z3V4 1068 aa17.41■□□□□ 0.38
NR4A1-205ENST00000478250 EAF2Q96CJ1 260 aaPredicted RBP17.41■□□□□ 0.38
NR4A1-205ENST00000478250 UBE2HP62256 183 aa17.4■□□□□ 0.38
NR4A1-205ENST00000478250 FAM193AP78312 1265 aa17.4■□□□□ 0.38
NR4A1-205ENST00000478250 NOLC1Q14978 699 aaKnown RBP eCLIP17.4■□□□□ 0.38
NR4A1-205ENST00000478250 PDCL2Q8N4E4 241 aa17.4■□□□□ 0.38
NR4A1-205ENST00000478250 EVI5LQ96CN4 794 aa17.4■□□□□ 0.38
NR4A1-205ENST00000478250 TMOD3Q9NYL9 352 aa17.4■□□□□ 0.38
NR4A1-205ENST00000478250 SMC3Q9UQE7 1217 aa17.4■□□□□ 0.38
NR4A1-205ENST00000478250 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.4■□□□□ 0.38
NR4A1-205ENST00000478250 A0A087WZG4 1122 aa17.4■□□□□ 0.38
NR4A1-205ENST00000478250 LSG1Q9H089 658 aaKnown RBP17.4■□□□□ 0.38
NR4A1-205ENST00000478250 ATP5J2-PTCD1G3V325 749 aa17.39■□□□□ 0.37
NR4A1-205ENST00000478250 H7C1W4 665 aa17.39■□□□□ 0.37
NR4A1-205ENST00000478250 PTCD1O75127 700 aaKnown RBP17.39■□□□□ 0.37
NR4A1-205ENST00000478250 PPP4R3BQ5MIZ7 849 aa17.39■□□□□ 0.37
NR4A1-205ENST00000478250 TTLL7Q6ZT98 887 aa17.39■□□□□ 0.37
NR4A1-205ENST00000478250 LIMCH1Q9UPQ0 1083 aa17.39■□□□□ 0.37
NR4A1-205ENST00000478250 PTPN12Q05209 780 aaKnown RBP17.38■□□□□ 0.37
NR4A1-205ENST00000478250 RUFY2Q8WXA3 655 aa17.38■□□□□ 0.37
NR4A1-205ENST00000478250 SIL1Q9H173 461 aa17.38■□□□□ 0.37
NR4A1-205ENST00000478250 CNPY2Q9Y2B0 182 aa17.38■□□□□ 0.37
NR4A1-205ENST00000478250 STX6O43752 255 aa17.37■□□□□ 0.37
NR4A1-205ENST00000478250 A1BGP04217 495 aa17.37■□□□□ 0.37
NR4A1-205ENST00000478250 GABPB1Q06547 395 aaPredicted RBP17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms