RNA–Protein interactions for RNA: ENST00000478089.1

FBXO42-204, Transcript of F-box protein 42, humanhuman

TSL 1 (best)

Gene FBXO42, Length 2,920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO42-204ENST00000478089 IFT88Q13099 833 aa9.43□□□□□ -0.9
FBXO42-204ENST00000478089 MICALL1Q8N3F8 863 aa9.43□□□□□ -0.9
FBXO42-204ENST00000478089 ABCC3O15438 1527 aa9.43□□□□□ -0.9
FBXO42-204ENST00000478089 DIP2CQ9Y2E4 1556 aa9.43□□□□□ -0.9
FBXO42-204ENST00000478089 NDUFV2P19404 249 aa9.43□□□□□ -0.9
FBXO42-204ENST00000478089 CASQ1P31415 396 aa9.43□□□□□ -0.9
FBXO42-204ENST00000478089 DIXDC1Q155Q3 683 aa9.43□□□□□ -0.9
FBXO42-204ENST00000478089 TBC1D10BQ4KMP7 808 aaPredicted RBP9.43□□□□□ -0.9
FBXO42-204ENST00000478089 TMC1Q8TDI8 760 aa9.43□□□□□ -0.9
FBXO42-204ENST00000478089 PAGR1Q9BTK6 254 aa9.43□□□□□ -0.9
FBXO42-204ENST00000478089 CGNQ9P2M7 1197 aaKnown RBP9.43□□□□□ -0.9
FBXO42-204ENST00000478089 SUN2Q9UH99 717 aa9.43□□□□□ -0.9
FBXO42-204ENST00000478089 USP17L15C9J2P7 530 aa9.42□□□□□ -0.9
FBXO42-204ENST00000478089 USP17L10C9JJH3 530 aa9.42□□□□□ -0.9
FBXO42-204ENST00000478089 USP17L13C9JLJ4 530 aa9.42□□□□□ -0.9
FBXO42-204ENST00000478089 USP17L12C9JPN9 530 aa9.42□□□□□ -0.9
FBXO42-204ENST00000478089 USP17L11C9JVI0 530 aa9.42□□□□□ -0.9
FBXO42-204ENST00000478089 USP17L21D6R901 530 aa9.42□□□□□ -0.9
FBXO42-204ENST00000478089 USP17L18D6R9N7 530 aa9.42□□□□□ -0.9
FBXO42-204ENST00000478089 USP17L22D6RA61 530 aa9.42□□□□□ -0.9
FBXO42-204ENST00000478089 USP17L17D6RBQ6 530 aa9.42□□□□□ -0.9
FBXO42-204ENST00000478089 USP17L19D6RCP7 530 aa9.42□□□□□ -0.9
FBXO42-204ENST00000478089 USP17L20D6RJB6 530 aa9.42□□□□□ -0.9
FBXO42-204ENST00000478089 PRC1O43663 620 aa9.42□□□□□ -0.9
FBXO42-204ENST00000478089 KIF1CO43896 1103 aaKnown RBP9.42□□□□□ -0.9
FBXO42-204ENST00000478089 LZTS3O60299 673 aaPredicted RBP9.42□□□□□ -0.9
FBXO42-204ENST00000478089 SKILP12757 684 aa9.42□□□□□ -0.9
FBXO42-204ENST00000478089 USP17L24Q0WX57 530 aa9.42□□□□□ -0.9
FBXO42-204ENST00000478089 RAVER1Q8IY67 606 aaKnown RBP9.42□□□□□ -0.9
FBXO42-204ENST00000478089 PDILTQ8N807 584 aa9.42□□□□□ -0.9
FBXO42-204ENST00000478089 TSPYL1Q9H0U9 437 aa9.42□□□□□ -0.9
FBXO42-204ENST00000478089 DONSONQ9NYP3 566 aa9.42□□□□□ -0.9
FBXO42-204ENST00000478089 SMG6Q86US8 1419 aaKnown RBP9.42□□□□□ -0.9
FBXO42-204ENST00000478089 EIF3AQ14152 1382 aaKnown RBP9.42□□□□□ -0.9
FBXO42-204ENST00000478089 SYNMO15061 1565 aa9.42□□□□□ -0.9
FBXO42-204ENST00000478089 TSPOAP1O95153 1857 aa9.42□□□□□ -0.9
FBXO42-204ENST00000478089 BICDL2A1A5D9 508 aa9.42□□□□□ -0.9
FBXO42-204ENST00000478089 ERICH4A6NGS2 130 aa9.42□□□□□ -0.9
FBXO42-204ENST00000478089 FOXK1P85037 733 aa9.42□□□□□ -0.9
FBXO42-204ENST00000478089 NPATQ14207 1427 aa9.42□□□□□ -0.9
FBXO42-204ENST00000478089 INSRP06213 1382 aa9.42□□□□□ -0.9
FBXO42-204ENST00000478089 CAMSAP1Q5T5Y3 1602 aa9.42□□□□□ -0.9
FBXO42-204ENST00000478089 CTDSPL2Q05D32 466 aa9.42□□□□□ -0.9
FBXO42-204ENST00000478089 E2F5Q15329 346 aa9.42□□□□□ -0.9
FBXO42-204ENST00000478089 C16orf87Q6PH81 154 aa9.42□□□□□ -0.9
FBXO42-204ENST00000478089 NLRP13Q86W25 1043 aa9.42□□□□□ -0.9
FBXO42-204ENST00000478089 DZIP3Q86Y13 1208 aaKnown RBP9.42□□□□□ -0.9
FBXO42-204ENST00000478089 CFAP53Q96M91 514 aa9.42□□□□□ -0.9
FBXO42-204ENST00000478089 DIS3Q9Y2L1 958 aaKnown RBP9.42□□□□□ -0.9
FBXO42-204ENST00000478089 THRAP3Q9Y2W1 955 aaKnown RBP9.42□□□□□ -0.9
FBXO42-204ENST00000478089 ZC3H13Q5T200 1668 aaKnown RBP9.41□□□□□ -0.9
FBXO42-204ENST00000478089 DEPDC4Q8N2C3 294 aa9.41□□□□□ -0.9
FBXO42-204ENST00000478089 IL17RAQ96F46 866 aa9.41□□□□□ -0.9
FBXO42-204ENST00000478089 NUCKS1Q9H1E3 243 aaKnown RBP9.41□□□□□ -0.9
FBXO42-204ENST00000478089 SETBP1Q9Y6X0 1596 aa9.41□□□□□ -0.9
FBXO42-204ENST00000478089 PPLO60437 1756 aa9.41□□□□□ -0.9
FBXO42-204ENST00000478089 MYO3AQ8NEV4 1616 aa9.41□□□□□ -0.9
FBXO42-204ENST00000478089 USP17L3A6NCW0 530 aa9.41□□□□□ -0.9
FBXO42-204ENST00000478089 USP17L4A6NCW7 530 aa9.41□□□□□ -0.9
FBXO42-204ENST00000478089 PDGFRBP09619 1106 aa9.41□□□□□ -0.9
FBXO42-204ENST00000478089 USP17L2Q6R6M4 530 aa9.41□□□□□ -0.9
FBXO42-204ENST00000478089 USP17L1Q7RTZ2 530 aa9.41□□□□□ -0.9
FBXO42-204ENST00000478089 RETREG1Q9H6L5 497 aa9.41□□□□□ -0.9
FBXO42-204ENST00000478089 DCTN4Q9UJW0 460 aa9.41□□□□□ -0.9
FBXO42-204ENST00000478089 TPM3P06753 285 aa9.4□□□□□ -0.9
FBXO42-204ENST00000478089 NEFHP12036 1026 aa9.4□□□□□ -0.9
FBXO42-204ENST00000478089 PSMD2Q13200 908 aa9.4□□□□□ -0.9
FBXO42-204ENST00000478089 MLECQ14165 292 aa9.4□□□□□ -0.9
FBXO42-204ENST00000478089 CCDC70Q6NSX1 233 aa9.4□□□□□ -0.9
FBXO42-204ENST00000478089 IER2Q9BTL4 223 aa9.4□□□□□ -0.9
FBXO42-204ENST00000478089 QTRT2Q9H974 415 aaKnown RBP9.4□□□□□ -0.9
FBXO42-204ENST00000478089 PANK3Q9H999 370 aa9.4□□□□□ -0.9
FBXO42-204ENST00000478089 NOS1P29475 1434 aa9.4□□□□□ -0.9
FBXO42-204ENST00000478089 PIK3C2BO00750 1634 aa9.4□□□□□ -0.9
FBXO42-204ENST00000478089 DNAJC6O75061 913 aa9.4□□□□□ -0.9
FBXO42-204ENST00000478089 U2AF1L5P0DN76 240 aaPredicted RBP9.4□□□□□ -0.9
FBXO42-204ENST00000478089 ARHGAP4P98171 946 aa9.4□□□□□ -0.9
FBXO42-204ENST00000478089 U2AF1Q01081 240 aaKnown RBP eCLIP9.4□□□□□ -0.9
FBXO42-204ENST00000478089 L1TD1Q5T7N2 865 aaKnown RBP9.4□□□□□ -0.9
FBXO42-204ENST00000478089 NYAP1Q6ZVC0 841 aa9.4□□□□□ -0.9
FBXO42-204ENST00000478089 UPF1Q92900 1129 aaKnown RBP eCLIP9.4□□□□□ -0.9
FBXO42-204ENST00000478089 TSR2Q969E8 191 aaKnown RBP9.4□□□□□ -0.9
FBXO42-204ENST00000478089 NEUROD6Q96NK8 337 aa9.4□□□□□ -0.9
FBXO42-204ENST00000478089 KDM5AP29375 1690 aaKnown RBP9.4□□□□□ -0.91
FBXO42-204ENST00000478089 ARHGAP31Q2M1Z3 1444 aa9.4□□□□□ -0.91
FBXO42-204ENST00000478089 FAM196BA6NMK8 535 aa9.39□□□□□ -0.91
FBXO42-204ENST00000478089 GIGYF1O75420 1035 aaPredicted RBP9.39□□□□□ -0.91
FBXO42-204ENST00000478089 ENOX2Q16206 610 aaKnown RBP9.39□□□□□ -0.91
FBXO42-204ENST00000478089 MYOM1P52179 1685 aa9.39□□□□□ -0.91
FBXO42-204ENST00000478089 ICMTO60725 284 aa9.39□□□□□ -0.91
FBXO42-204ENST00000478089 RBM5P52756 815 aaKnown RBP eCLIP9.39□□□□□ -0.91
FBXO42-204ENST00000478089 EIF5P55010 431 aaKnown RBP9.39□□□□□ -0.91
FBXO42-204ENST00000478089 PTK7Q13308 1070 aa9.39□□□□□ -0.91
FBXO42-204ENST00000478089 ODR4Q5SWX8 454 aa9.39□□□□□ -0.91
FBXO42-204ENST00000478089 LARP1BQ659C4 914 aaKnown RBP9.39□□□□□ -0.91
FBXO42-204ENST00000478089 MCF2L2Q86YR7 1114 aa9.39□□□□□ -0.91
FBXO42-204ENST00000478089 GAS2L2Q8NHY3 880 aa9.39□□□□□ -0.91
FBXO42-204ENST00000478089 SLC39A13Q96H72 371 aa9.39□□□□□ -0.91
FBXO42-204ENST00000478089 ADGRF5Q8IZF2 1346 aa9.39□□□□□ -0.91
FBXO42-204ENST00000478089 HMMRO75330 724 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms