RNA–Protein interactions for RNA: ENST00000478015.5

LCLAT1-209, Transcript of lysocardiolipin acyltransferase 1, humanhuman

TSL 2

Gene LCLAT1, Length 1,862 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCLAT1-209ENST00000478015 WTIPA6NIX2 430 aaPredicted RBP13.17□□□□□ -0.3
LCLAT1-209ENST00000478015 GRAPQ13588 217 aa13.17□□□□□ -0.3
LCLAT1-209ENST00000478015 GRAPLQ8TC17 118 aaPredicted RBP13.17□□□□□ -0.3
LCLAT1-209ENST00000478015 FLIIQ13045 1269 aa13.16□□□□□ -0.3
LCLAT1-209ENST00000478015 AOC3Q16853 763 aa13.16□□□□□ -0.3
LCLAT1-209ENST00000478015 DPY19L2Q6NUT2 758 aa13.16□□□□□ -0.3
LCLAT1-209ENST00000478015 DNAJC5GQ8N7S2 189 aa13.16□□□□□ -0.3
LCLAT1-209ENST00000478015 F6X3S4 739 aa13.16□□□□□ -0.3
LCLAT1-209ENST00000478015 BBOX1O75936 387 aa13.16□□□□□ -0.3
LCLAT1-209ENST00000478015 DDX46Q7L014 1031 aaKnown RBP13.16□□□□□ -0.3
LCLAT1-209ENST00000478015 SP8Q8IXZ3 490 aa13.16□□□□□ -0.3
LCLAT1-209ENST00000478015 CCDC191Q8NCU4 936 aa13.16□□□□□ -0.3
LCLAT1-209ENST00000478015 GPR101Q96P66 508 aaPredicted RBP13.16□□□□□ -0.3
LCLAT1-209ENST00000478015 CACNA1FO60840 1977 aa13.16□□□□□ -0.3
LCLAT1-209ENST00000478015 PCCAP05165 728 aaPredicted RBP13.15□□□□□ -0.3
LCLAT1-209ENST00000478015 CC2D2BQ6DHV5 1058 aa13.15□□□□□ -0.3
LCLAT1-209ENST00000478015 CDCA7LQ96GN5 454 aa13.15□□□□□ -0.3
LCLAT1-209ENST00000478015 L3MBTL3Q96JM7 780 aaPredicted RBP13.15□□□□□ -0.3
LCLAT1-209ENST00000478015 RTFDC1Q9BY42 306 aaPredicted RBP13.15□□□□□ -0.3
LCLAT1-209ENST00000478015 CWC25Q9NXE8 425 aaPredicted RBP13.15□□□□□ -0.3
LCLAT1-209ENST00000478015 NEURL1BA8MQ27 555 aa13.14□□□□□ -0.31
LCLAT1-209ENST00000478015 STK31Q9BXU1 1019 aa13.14□□□□□ -0.31
LCLAT1-209ENST00000478015 SCN4AP35499 1836 aa13.14□□□□□ -0.31
LCLAT1-209ENST00000478015 C16orf71Q8IYS4 520 aaPredicted RBP13.14□□□□□ -0.31
LCLAT1-209ENST00000478015 LARGE2Q8N3Y3 721 aa13.14□□□□□ -0.31
LCLAT1-209ENST00000478015 TAF1DQ9H5J8 278 aaPredicted RBP13.14□□□□□ -0.31
LCLAT1-209ENST00000478015 POLLQ9UGP5 575 aa13.14□□□□□ -0.31
LCLAT1-209ENST00000478015 YDJCA8MPS7 323 aa13.13□□□□□ -0.31
LCLAT1-209ENST00000478015 PPIP5K2O43314 1243 aa13.13□□□□□ -0.31
LCLAT1-209ENST00000478015 SCNN1DP51172 638 aa13.13□□□□□ -0.31
LCLAT1-209ENST00000478015 CASP7P55210 303 aa13.13□□□□□ -0.31
LCLAT1-209ENST00000478015 GPSM2P81274 684 aa13.13□□□□□ -0.31
LCLAT1-209ENST00000478015 MPNDQ8N594 471 aa13.13□□□□□ -0.31
LCLAT1-209ENST00000478015 KCNQ5Q9NR82 932 aa13.13□□□□□ -0.31
LCLAT1-209ENST00000478015 ADAMTSL1Q8N6G6 1762 aa13.13□□□□□ -0.31
LCLAT1-209ENST00000478015 MYH3P11055 1940 aa13.12□□□□□ -0.31
LCLAT1-209ENST00000478015 DDX58O95786 925 aaKnown RBP13.12□□□□□ -0.31
LCLAT1-209ENST00000478015 FSTL1Q12841 308 aa13.12□□□□□ -0.31
LCLAT1-209ENST00000478015 FKBP5Q13451 457 aaPredicted RBP13.12□□□□□ -0.31
LCLAT1-209ENST00000478015 DPP8Q6V1X1 898 aaPredicted RBP13.12□□□□□ -0.31
LCLAT1-209ENST00000478015 SCN9AQ15858 1988 aa13.12□□□□□ -0.31
LCLAT1-209ENST00000478015 SHTN1A0MZ66 631 aa13.12□□□□□ -0.31
LCLAT1-209ENST00000478015 H7C1W4 665 aa13.12□□□□□ -0.31
LCLAT1-209ENST00000478015 EPS15P42566 896 aa13.12□□□□□ -0.31
LCLAT1-209ENST00000478015 RPS8P62241 208 aaKnown RBP13.12□□□□□ -0.31
LCLAT1-209ENST00000478015 CXCL9Q07325 125 aa13.12□□□□□ -0.31
LCLAT1-209ENST00000478015 UBE3BQ7Z3V4 1068 aa13.12□□□□□ -0.31
LCLAT1-209ENST00000478015 GPC2Q8N158 579 aa13.12□□□□□ -0.31
LCLAT1-209ENST00000478015 SMC1BQ8NDV3 1235 aa13.12□□□□□ -0.31
LCLAT1-209ENST00000478015 TTLL11Q8NHH1 800 aa13.12□□□□□ -0.31
LCLAT1-209ENST00000478015 JDP2Q8WYK2 163 aa13.12□□□□□ -0.31
LCLAT1-209ENST00000478015 NSFL1CQ9UNZ2 370 aaKnown RBP13.12□□□□□ -0.31
LCLAT1-209ENST00000478015 GJA3Q9Y6H8 435 aa13.12□□□□□ -0.31
LCLAT1-209ENST00000478015 SPEF2Q9C093 1822 aa13.12□□□□□ -0.31
LCLAT1-209ENST00000478015 PDE8AO60658 829 aa13.11□□□□□ -0.31
LCLAT1-209ENST00000478015 KIAA2012Q0VF49 1180 aa13.11□□□□□ -0.31
LCLAT1-209ENST00000478015 GCKRQ14397 625 aa13.11□□□□□ -0.31
LCLAT1-209ENST00000478015 DNAAF4Q8WXU2 420 aa13.11□□□□□ -0.31
LCLAT1-209ENST00000478015 GREM2Q9H772 168 aa13.11□□□□□ -0.31
LCLAT1-209ENST00000478015 FMR1Q06787 632 aaKnown RBP eCLIP13.1□□□□□ -0.31
LCLAT1-209ENST00000478015 CDHR2Q9BYE9 1310 aa13.1□□□□□ -0.31
LCLAT1-209ENST00000478015 RAD17O75943 681 aa13.1□□□□□ -0.31
LCLAT1-209ENST00000478015 APLP1P51693 650 aa13.1□□□□□ -0.31
LCLAT1-209ENST00000478015 CTSWP56202 376 aa13.1□□□□□ -0.31
LCLAT1-209ENST00000478015 BEND3Q5T5X7 828 aa13.1□□□□□ -0.31
LCLAT1-209ENST00000478015 MYH16Q9H6N6 1097 aa13.1□□□□□ -0.31
LCLAT1-209ENST00000478015 RIMBP2O15034 1052 aa13.09□□□□□ -0.31
LCLAT1-209ENST00000478015 ITGBL1O95965 494 aaPredicted RBP13.09□□□□□ -0.31
LCLAT1-209ENST00000478015 EPHX2P34913 555 aa13.09□□□□□ -0.31
LCLAT1-209ENST00000478015 SLFN5Q08AF3 891 aa13.09□□□□□ -0.31
LCLAT1-209ENST00000478015 EPHA10Q5JZY3 1008 aa13.09□□□□□ -0.31
LCLAT1-209ENST00000478015 MIER1Q8N108 512 aa13.09□□□□□ -0.31
LCLAT1-209ENST00000478015 TBC1D16Q8TBP0 767 aa13.09□□□□□ -0.31
LCLAT1-209ENST00000478015 DBNDD1Q9H9R9 158 aa13.09□□□□□ -0.31
LCLAT1-209ENST00000478015 GRIPAP1Q4V328 841 aa13.08□□□□□ -0.32
LCLAT1-209ENST00000478015 EAPPQ56P03 285 aaPredicted RBP13.08□□□□□ -0.32
LCLAT1-209ENST00000478015 NIM1KQ8IY84 436 aa13.08□□□□□ -0.32
LCLAT1-209ENST00000478015 LINS1Q8NG48 757 aa13.08□□□□□ -0.32
LCLAT1-209ENST00000478015 HACL1Q9UJ83 578 aa13.08□□□□□ -0.32
LCLAT1-209ENST00000478015 ZNRF3Q9ULT6 936 aa13.08□□□□□ -0.32
LCLAT1-209ENST00000478015 NEXNQ0ZGT2 675 aa13.08□□□□□ -0.32
LCLAT1-209ENST00000478015 CCDC152Q4G0S7 254 aa13.08□□□□□ -0.32
LCLAT1-209ENST00000478015 MAP1SQ66K74 1059 aaPredicted RBP13.08□□□□□ -0.32
LCLAT1-209ENST00000478015 CHADLQ6NUI6 762 aa13.08□□□□□ -0.32
LCLAT1-209ENST00000478015 TRMT2AQ8IZ69 625 aaKnown RBP13.08□□□□□ -0.32
LCLAT1-209ENST00000478015 BCL2L13Q9BXK5 485 aa13.08□□□□□ -0.32
LCLAT1-209ENST00000478015 ZBTB12Q9Y330 459 aaPredicted RBP13.08□□□□□ -0.32
LCLAT1-209ENST00000478015 RTL9Q8NET4 1388 aa13.07□□□□□ -0.32
LCLAT1-209ENST00000478015 EIF6P56537 245 aaKnown RBP13.07□□□□□ -0.32
LCLAT1-209ENST00000478015 DOK7Q18PE1 504 aa13.07□□□□□ -0.32
LCLAT1-209ENST00000478015 WASHC4Q2M389 1173 aa13.07□□□□□ -0.32
LCLAT1-209ENST00000478015 SSH1Q8WYL5 1049 aa13.07□□□□□ -0.32
LCLAT1-209ENST00000478015 CHMP4AQ9BY43 222 aa13.07□□□□□ -0.32
LCLAT1-209ENST00000478015 PASKQ96RG2 1323 aa13.07□□□□□ -0.32
LCLAT1-209ENST00000478015 IQCA1LA6NCM1 817 aa13.06□□□□□ -0.32
LCLAT1-209ENST00000478015 C6orf229H3BNL8 230 aa13.06□□□□□ -0.32
LCLAT1-209ENST00000478015 CCER2I3L3R5 266 aa13.06□□□□□ -0.32
LCLAT1-209ENST00000478015 EGFRP00533 1210 aa13.06□□□□□ -0.32
LCLAT1-209ENST00000478015 GMPSP49915 693 aaPredicted RBP13.06□□□□□ -0.32
LCLAT1-209ENST00000478015 HIRAP54198 1017 aaPredicted RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms