RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 SUPT20HQ8NEM7 779 aa9.93□□□□□ -0.82
SPTLC1-205ENST00000477888 DPF2Q92785 391 aa9.93□□□□□ -0.82
SPTLC1-205ENST00000477888 SZT2Q5T011 3432 aa9.93□□□□□ -0.82
SPTLC1-205ENST00000477888 ADM5C9JUS6 153 aa9.92□□□□□ -0.82
SPTLC1-205ENST00000477888 POLR3GLQ9BT43 218 aa9.92□□□□□ -0.82
SPTLC1-205ENST00000477888 ZBTB12Q9Y330 459 aaPredicted RBP9.92□□□□□ -0.82
SPTLC1-205ENST00000477888 POTEFA5A3E0 1075 aa9.91□□□□□ -0.82
SPTLC1-205ENST00000477888 ERVV-1B6SEH8 477 aa9.91□□□□□ -0.82
SPTLC1-205ENST00000477888 GPR25O00155 361 aa9.91□□□□□ -0.82
SPTLC1-205ENST00000477888 SUSD4Q5VX71 490 aa9.91□□□□□ -0.82
SPTLC1-205ENST00000477888 RASAL3Q86YV0 1011 aa9.91□□□□□ -0.82
SPTLC1-205ENST00000477888 GAS2L2Q8NHY3 880 aa9.91□□□□□ -0.82
SPTLC1-205ENST00000477888 DCPSQ96C86 337 aaKnown RBP9.91□□□□□ -0.82
SPTLC1-205ENST00000477888 TMX4Q9H1E5 349 aaPredicted RBP9.91□□□□□ -0.82
SPTLC1-205ENST00000477888 COLQQ9Y215 455 aaPredicted RBP9.91□□□□□ -0.82
SPTLC1-205ENST00000477888 UBN2Q6ZU65 1347 aa9.9□□□□□ -0.82
SPTLC1-205ENST00000477888 DIAPH1O60610 1272 aaKnown RBP9.9□□□□□ -0.82
SPTLC1-205ENST00000477888 SLC4A2P04920 1241 aa9.9□□□□□ -0.82
SPTLC1-205ENST00000477888 TM4SF4P48230 202 aa9.9□□□□□ -0.82
SPTLC1-205ENST00000477888 TBC1D10BQ4KMP7 808 aaPredicted RBP9.9□□□□□ -0.82
SPTLC1-205ENST00000477888 DPP8Q6V1X1 898 aaPredicted RBP9.9□□□□□ -0.82
SPTLC1-205ENST00000477888 SP8Q8IXZ3 490 aa9.9□□□□□ -0.82
SPTLC1-205ENST00000477888 MPNDQ8N594 471 aa9.9□□□□□ -0.82
SPTLC1-205ENST00000477888 HTTP42858 3142 aa9.89□□□□□ -0.83
SPTLC1-205ENST00000477888 BBOX1O75936 387 aa9.89□□□□□ -0.83
SPTLC1-205ENST00000477888 MYCNP04198 464 aaPredicted RBP9.89□□□□□ -0.83
SPTLC1-205ENST00000477888 SLC10A5Q5PT55 438 aa9.89□□□□□ -0.83
SPTLC1-205ENST00000477888 RBM26Q5T8P6 1007 aaKnown RBP9.89□□□□□ -0.83
SPTLC1-205ENST00000477888 INTS3Q68E01 1043 aaKnown RBP9.89□□□□□ -0.83
SPTLC1-205ENST00000477888 ZNF34Q8IZ26 560 aa9.89□□□□□ -0.83
SPTLC1-205ENST00000477888 IBTKQ9P2D0 1353 aaPredicted RBP9.88□□□□□ -0.83
SPTLC1-205ENST00000477888 PSMD14O00487 310 aa9.88□□□□□ -0.83
SPTLC1-205ENST00000477888 NTSR2O95665 410 aa9.88□□□□□ -0.83
SPTLC1-205ENST00000477888 GPTP24298 496 aa9.88□□□□□ -0.83
SPTLC1-205ENST00000477888 FKBP1BP68106 108 aa9.88□□□□□ -0.83
SPTLC1-205ENST00000477888 SULF1Q8IWU6 871 aa9.88□□□□□ -0.83
SPTLC1-205ENST00000477888 SLC17A8Q8NDX2 589 aa9.88□□□□□ -0.83
SPTLC1-205ENST00000477888 CDCA5Q96FF9 252 aa9.88□□□□□ -0.83
SPTLC1-205ENST00000477888 NLRP3Q96P20 1036 aa9.88□□□□□ -0.83
SPTLC1-205ENST00000477888 CFHR5Q9BXR6 569 aa9.88□□□□□ -0.83
SPTLC1-205ENST00000477888 R3HDMLQ9H3Y0 253 aa9.88□□□□□ -0.83
SPTLC1-205ENST00000477888 ABCC4O15439 1325 aa9.87□□□□□ -0.83
SPTLC1-205ENST00000477888 ASTN2O75129 1339 aaPredicted RBP9.87□□□□□ -0.83
SPTLC1-205ENST00000477888 MAP3K15Q6ZN16 1313 aa9.87□□□□□ -0.83
SPTLC1-205ENST00000477888 BRCA2P51587 3418 aa9.87□□□□□ -0.83
SPTLC1-205ENST00000477888 FKTNO75072 461 aa9.87□□□□□ -0.83
SPTLC1-205ENST00000477888 RPS12P25398 132 aaKnown RBP9.87□□□□□ -0.83
SPTLC1-205ENST00000477888 OTUD5Q96G74 571 aa9.87□□□□□ -0.83
SPTLC1-205ENST00000477888 PHACTR3Q96KR7 559 aa9.87□□□□□ -0.83
SPTLC1-205ENST00000477888 KNSTRNQ9Y448 316 aa9.87□□□□□ -0.83
SPTLC1-205ENST00000477888 EN2P19622 333 aaPredicted RBP9.86□□□□□ -0.83
SPTLC1-205ENST00000477888 TTLL7Q6ZT98 887 aa9.86□□□□□ -0.83
SPTLC1-205ENST00000477888 NGEFQ8N5V2 710 aa9.86□□□□□ -0.83
SPTLC1-205ENST00000477888 KCNQ5Q9NR82 932 aa9.86□□□□□ -0.83
SPTLC1-205ENST00000477888 GGA3Q9NZ52 723 aa9.86□□□□□ -0.83
SPTLC1-205ENST00000477888 CENPFP49454 3210 aa9.86□□□□□ -0.83
SPTLC1-205ENST00000477888 KIF4BQ2VIQ3 1234 aa9.85□□□□□ -0.83
SPTLC1-205ENST00000477888 MOB2Q70IA6 237 aa9.85□□□□□ -0.83
SPTLC1-205ENST00000477888 RTL9Q8NET4 1388 aa9.85□□□□□ -0.83
SPTLC1-205ENST00000477888 UBE2Q2LH0YL09 131 aa9.84□□□□□ -0.83
SPTLC1-205ENST00000477888 WASHC4Q2M389 1173 aa9.84□□□□□ -0.83
SPTLC1-205ENST00000477888 GIGYF2Q6Y7W6 1299 aaKnown RBP9.84□□□□□ -0.83
SPTLC1-205ENST00000477888 PPP1R42Q7Z4L9 355 aa9.84□□□□□ -0.83
SPTLC1-205ENST00000477888 ZBTB3Q9H5J0 574 aa9.84□□□□□ -0.83
SPTLC1-205ENST00000477888 DBNDD1Q9H9R9 158 aa9.84□□□□□ -0.83
SPTLC1-205ENST00000477888 TRIM17Q9Y577 477 aa9.84□□□□□ -0.83
SPTLC1-205ENST00000477888 RANBP2P49792 3224 aaKnown RBP9.84□□□□□ -0.83
SPTLC1-205ENST00000477888 VIL1P09327 827 aaKnown RBP9.83□□□□□ -0.84
SPTLC1-205ENST00000477888 SCARF1Q14162 830 aa9.83□□□□□ -0.84
SPTLC1-205ENST00000477888 PARP10Q53GL7 1025 aa9.83□□□□□ -0.84
SPTLC1-205ENST00000477888 ANGEL2Q5VTE6 544 aaKnown RBP9.83□□□□□ -0.84
SPTLC1-205ENST00000477888 KIF6Q6ZMV9 814 aa9.83□□□□□ -0.84
SPTLC1-205ENST00000477888 MCM10Q7L590 875 aa9.83□□□□□ -0.84
SPTLC1-205ENST00000477888 OTOP1Q7RTM1 612 aa9.83□□□□□ -0.84
SPTLC1-205ENST00000477888 ARMC5Q96C12 935 aa9.83□□□□□ -0.84
SPTLC1-205ENST00000477888 UTP14AQ9BVJ6 771 aaKnown RBP9.83□□□□□ -0.84
SPTLC1-205ENST00000477888 RRP7AQ9Y3A4 280 aaKnown RBP9.83□□□□□ -0.84
SPTLC1-205ENST00000477888 COL6A3P12111 3177 aa9.83□□□□□ -0.84
SPTLC1-205ENST00000477888 H0YGN5 161 aa9.82□□□□□ -0.84
SPTLC1-205ENST00000477888 U2SURPO15042 1029 aaKnown RBP9.82□□□□□ -0.84
SPTLC1-205ENST00000477888 ZNF280AP59817 542 aaPredicted RBP9.82□□□□□ -0.84
SPTLC1-205ENST00000477888 GRAPQ13588 217 aa9.82□□□□□ -0.84
SPTLC1-205ENST00000477888 GRAPLQ8TC17 118 aaPredicted RBP9.82□□□□□ -0.84
SPTLC1-205ENST00000477888 POLLQ9UGP5 575 aa9.82□□□□□ -0.84
SPTLC1-205ENST00000477888 PTPN22Q9Y2R2 807 aa9.82□□□□□ -0.84
SPTLC1-205ENST00000477888 SIPA1L3O60292 1781 aaPredicted RBP9.82□□□□□ -0.84
SPTLC1-205ENST00000477888 RIMBP2O15034 1052 aa9.81□□□□□ -0.84
SPTLC1-205ENST00000477888 ECE2O60344 883 aa9.81□□□□□ -0.84
SPTLC1-205ENST00000477888 HOXD11P31277 338 aaPredicted RBP9.81□□□□□ -0.84
SPTLC1-205ENST00000477888 SREBF2Q12772 1141 aa9.81□□□□□ -0.84
SPTLC1-205ENST00000477888 MKRN3Q13064 507 aaKnown RBP9.81□□□□□ -0.84
SPTLC1-205ENST00000477888 DDX46Q7L014 1031 aaKnown RBP9.81□□□□□ -0.84
SPTLC1-205ENST00000477888 TMC4Q7Z404 712 aa9.81□□□□□ -0.84
SPTLC1-205ENST00000477888 MIS18AQ9NYP9 233 aa9.81□□□□□ -0.84
SPTLC1-205ENST00000477888 NSFL1CQ9UNZ2 370 aaKnown RBP9.81□□□□□ -0.84
SPTLC1-205ENST00000477888 AKAP11Q9UKA4 1901 aa9.81□□□□□ -0.84
SPTLC1-205ENST00000477888 TRIOBPQ9H2D6 2365 aa9.81□□□□□ -0.84
SPTLC1-205ENST00000477888 ALDH1A1P00352 501 aa9.8□□□□□ -0.84
SPTLC1-205ENST00000477888 HCLS1P14317 486 aaPredicted RBP9.8□□□□□ -0.84
SPTLC1-205ENST00000477888 MYL6BP14649 208 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms