RNA–Protein interactions for RNA: ENST00000477702.1

LINC00173-202, long intergenic non-protein coding RNA 173, humanhuman

TSL 3

Gene LINC00173, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-202ENST00000477702 KCNC4Q03721 635 aa8.8□□□□□ -1
LINC00173-202ENST00000477702 POM121Q96HA1 1249 aa8.8□□□□□ -1
LINC00173-202ENST00000477702 RNF181Q9P0P0 153 aa8.8□□□□□ -1
LINC00173-202ENST00000477702 PALLDQ8WX93 1383 aa8.8□□□□□ -1
LINC00173-202ENST00000477702 PLEKHG2Q9H7P9 1386 aa8.8□□□□□ -1
LINC00173-202ENST00000477702 N4BP2Q86UW6 1770 aaPredicted RBP8.79□□□□□ -1
LINC00173-202ENST00000477702 KTN1Q86UP2 1357 aaKnown RBP8.79□□□□□ -1
LINC00173-202ENST00000477702 PPEF1O14829 653 aaPredicted RBP8.79□□□□□ -1
LINC00173-202ENST00000477702 DXOO77932 396 aaKnown RBP8.79□□□□□ -1
LINC00173-202ENST00000477702 FLIIQ13045 1269 aa8.79□□□□□ -1
LINC00173-202ENST00000477702 LYPD8Q6UX82 237 aa8.79□□□□□ -1
LINC00173-202ENST00000477702 SLC6A16Q9GZN6 736 aa8.79□□□□□ -1
LINC00173-202ENST00000477702 MKRN1Q9UHC7 482 aaKnown RBP8.79□□□□□ -1
LINC00173-202ENST00000477702 C4BP0C0L5 1744 aa8.78□□□□□ -1
LINC00173-202ENST00000477702 TOGARAM1Q9Y4F4 1720 aa8.78□□□□□ -1
LINC00173-202ENST00000477702 MMP16P51512 607 aa8.78□□□□□ -1
LINC00173-202ENST00000477702 TGFB2P61812 414 aa8.78□□□□□ -1
LINC00173-202ENST00000477702 DESI1Q6ICB0 168 aa8.78□□□□□ -1
LINC00173-202ENST00000477702 MPRIPQ6WCQ1 1025 aa8.78□□□□□ -1
LINC00173-202ENST00000477702 CLUAP1Q96AJ1 413 aa8.78□□□□□ -1
LINC00173-202ENST00000477702 TRIM34Q9BYJ4 488 aa8.78□□□□□ -1
LINC00173-202ENST00000477702 LTN1O94822 1766 aa8.78□□□□□ -1
LINC00173-202ENST00000477702 EVC2Q86UK5 1308 aa8.78□□□□□ -1
LINC00173-202ENST00000477702 MEGF6O75095 1541 aa8.77□□□□□ -1.01
LINC00173-202ENST00000477702 NR6A1Q15406 480 aa8.77□□□□□ -1.01
LINC00173-202ENST00000477702 MAP10Q9P2G4 905 aa8.77□□□□□ -1.01
LINC00173-202ENST00000477702 C10orf71Q711Q0 1435 aa8.77□□□□□ -1.01
LINC00173-202ENST00000477702 KIAA1551Q9HCM1 1747 aa8.77□□□□□ -1.01
LINC00173-202ENST00000477702 USP31Q70CQ4 1352 aa8.76□□□□□ -1.01
LINC00173-202ENST00000477702 TAF1LQ8IZX4 1826 aa8.76□□□□□ -1.01
LINC00173-202ENST00000477702 SSFA2P28290 1259 aa8.76□□□□□ -1.01
LINC00173-202ENST00000477702 LINC00116Q8NCU8 138 aa8.76□□□□□ -1.01
LINC00173-202ENST00000477702 IP6K1Q92551 441 aa8.76□□□□□ -1.01
LINC00173-202ENST00000477702 ABHD8Q96I13 439 aa8.76□□□□□ -1.01
LINC00173-202ENST00000477702 PRDM10Q9NQV6 1147 aa8.76□□□□□ -1.01
LINC00173-202ENST00000477702 PKD1L3Q7Z443 1732 aa8.76□□□□□ -1.01
LINC00173-202ENST00000477702 UBR3Q6ZT12 1888 aa8.75□□□□□ -1.01
LINC00173-202ENST00000477702 KCNA3P22001 575 aa8.75□□□□□ -1.01
LINC00173-202ENST00000477702 MLLT1Q03111 559 aaPredicted RBP8.75□□□□□ -1.01
LINC00173-202ENST00000477702 USHBP1Q8N6Y0 703 aa8.75□□□□□ -1.01
LINC00173-202ENST00000477702 NUDT12Q9BQG2 462 aa8.75□□□□□ -1.01
LINC00173-202ENST00000477702 TNRC6CQ9HCJ0 1690 aaKnown RBP8.75□□□□□ -1.01
LINC00173-202ENST00000477702 NSD3Q9BZ95 1437 aa8.74□□□□□ -1.01
LINC00173-202ENST00000477702 F12P00748 615 aaPredicted RBP8.74□□□□□ -1.01
LINC00173-202ENST00000477702 VEGFAP15692 232 aaPredicted RBP8.74□□□□□ -1.01
LINC00173-202ENST00000477702 CTCFP49711 727 aaPredicted RBP8.74□□□□□ -1.01
LINC00173-202ENST00000477702 LBX1P52954 281 aa8.74□□□□□ -1.01
LINC00173-202ENST00000477702 PTPRNQ16849 979 aa8.74□□□□□ -1.01
LINC00173-202ENST00000477702 DALRD3Q5D0E6 543 aaKnown RBP8.74□□□□□ -1.01
LINC00173-202ENST00000477702 PTCRAQ6ISU1 281 aaPredicted RBP8.74□□□□□ -1.01
LINC00173-202ENST00000477702 CCDC24Q8N4L8 307 aa8.74□□□□□ -1.01
LINC00173-202ENST00000477702 AIDAQ96BJ3 306 aa8.74□□□□□ -1.01
LINC00173-202ENST00000477702 GDPD2Q9HCC8 539 aa8.74□□□□□ -1.01
LINC00173-202ENST00000477702 CCDC87Q9NVE4 849 aa8.74□□□□□ -1.01
LINC00173-202ENST00000477702 TBC1D2BQ9UPU7 963 aa8.74□□□□□ -1.01
LINC00173-202ENST00000477702 COG6Q9Y2V7 657 aa8.74□□□□□ -1.01
LINC00173-202ENST00000477702 KIAA1210Q9ULL0 1709 aa8.74□□□□□ -1.01
LINC00173-202ENST00000477702 KIF13BQ9NQT8 1826 aa8.73□□□□□ -1.01
LINC00173-202ENST00000477702 CCDC85CA6NKD9 419 aa8.73□□□□□ -1.01
LINC00173-202ENST00000477702 GPR37L1O60883 481 aa8.73□□□□□ -1.01
LINC00173-202ENST00000477702 FBLN1P23142 703 aa8.73□□□□□ -1.01
LINC00173-202ENST00000477702 HMGB2P26583 209 aaKnown RBP8.73□□□□□ -1.01
LINC00173-202ENST00000477702 RASSF7Q02833 373 aa8.73□□□□□ -1.01
LINC00173-202ENST00000477702 ITPK1Q13572 414 aa8.73□□□□□ -1.01
LINC00173-202ENST00000477702 PPP1R18Q6NYC8 613 aa8.73□□□□□ -1.01
LINC00173-202ENST00000477702 SMARCC1Q92922 1105 aaPredicted RBP8.73□□□□□ -1.01
LINC00173-202ENST00000477702 DCAF5Q96JK2 942 aa8.73□□□□□ -1.01
LINC00173-202ENST00000477702 PIM2Q9P1W9 311 aa8.73□□□□□ -1.01
LINC00173-202ENST00000477702 FCF1Q9Y324 198 aaKnown RBP8.73□□□□□ -1.01
LINC00173-202ENST00000477702 SBNO2Q9Y2G9 1366 aa8.73□□□□□ -1.01
LINC00173-202ENST00000477702 FAM208AQ9UK61 1670 aaKnown RBP8.72□□□□□ -1.01
LINC00173-202ENST00000477702 LOC102724428A0A0B4J2F2 783 aa8.72□□□□□ -1.01
LINC00173-202ENST00000477702 RNF223E7ERA6 249 aa8.72□□□□□ -1.01
LINC00173-202ENST00000477702 CCNYL3P0C7X3 344 aa8.72□□□□□ -1.01
LINC00173-202ENST00000477702 CHRNA5P30532 468 aa8.72□□□□□ -1.01
LINC00173-202ENST00000477702 CTHP32929 405 aa8.72□□□□□ -1.01
LINC00173-202ENST00000477702 SIK1P57059 783 aa8.72□□□□□ -1.01
LINC00173-202ENST00000477702 TMF1P82094 1093 aa8.72□□□□□ -1.01
LINC00173-202ENST00000477702 PLA2G2CQ5R387 149 aa8.72□□□□□ -1.01
LINC00173-202ENST00000477702 NBPF6Q5VWK0 638 aa8.72□□□□□ -1.01
LINC00173-202ENST00000477702 PIGBQ92521 554 aa8.72□□□□□ -1.01
LINC00173-202ENST00000477702 NBPF4Q96M43 638 aa8.72□□□□□ -1.01
LINC00173-202ENST00000477702 RGPD2P0DJD1 1756 aa8.71□□□□□ -1.01
LINC00173-202ENST00000477702 HOXC9P31274 260 aa8.71□□□□□ -1.02
LINC00173-202ENST00000477702 AMPHP49418 695 aa8.71□□□□□ -1.02
LINC00173-202ENST00000477702 NLGN1Q8N2Q7 840 aa8.71□□□□□ -1.02
LINC00173-202ENST00000477702 TMC1Q8TDI8 760 aa8.71□□□□□ -1.02
LINC00173-202ENST00000477702 RAPGEF4Q8WZA2 1011 aa8.71□□□□□ -1.02
LINC00173-202ENST00000477702 ZMYND15Q9H091 742 aa8.71□□□□□ -1.02
LINC00173-202ENST00000477702 PLSCR2Q9NRY7 297 aa8.71□□□□□ -1.02
LINC00173-202ENST00000477702 EVA1BQ9NVM1 165 aa8.71□□□□□ -1.02
LINC00173-202ENST00000477702 PLA2G2EQ9NZK7 142 aa8.71□□□□□ -1.02
LINC00173-202ENST00000477702 PARP3Q9Y6F1 533 aa8.71□□□□□ -1.02
LINC00173-202ENST00000477702 MAP3K19Q56UN5 1328 aa8.71□□□□□ -1.02
LINC00173-202ENST00000477702 RAB3GAP2Q9H2M9 1393 aa8.71□□□□□ -1.02
LINC00173-202ENST00000477702 BRCA1P38398 1863 aaKnown RBP8.7□□□□□ -1.02
LINC00173-202ENST00000477702 GLTPD2A6NH11 291 aa8.7□□□□□ -1.02
LINC00173-202ENST00000477702 CYP27B1O15528 508 aa8.7□□□□□ -1.02
LINC00173-202ENST00000477702 TATP17735 454 aaPredicted RBP8.7□□□□□ -1.02
LINC00173-202ENST00000477702 KCNH2Q12809 1159 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms