RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 H0YHG0 523 aa14.91□□□□□ -0.02
RTFDC1-207ENST00000477573 MPHOSPH10O00566 681 aaKnown RBP14.91□□□□□ -0.02
RTFDC1-207ENST00000477573 SARNPP82979 210 aaKnown RBP14.91□□□□□ -0.02
RTFDC1-207ENST00000477573 AKAP4Q5JQC9 854 aa14.91□□□□□ -0.02
RTFDC1-207ENST00000477573 BORCS6Q96GS4 357 aa14.91□□□□□ -0.02
RTFDC1-207ENST00000477573 ERO1AQ96HE7 468 aa14.91□□□□□ -0.02
RTFDC1-207ENST00000477573 MED1Q15648 1581 aaPredicted RBP14.91□□□□□ -0.02
RTFDC1-207ENST00000477573 RGPD2P0DJD1 1756 aa14.9□□□□□ -0.02
RTFDC1-207ENST00000477573 CTAGE5O15320 804 aa14.9□□□□□ -0.02
RTFDC1-207ENST00000477573 ARID4AP29374 1257 aaPredicted RBP14.9□□□□□ -0.02
RTFDC1-207ENST00000477573 ZC3H6P61129 1189 aaKnown RBP14.9□□□□□ -0.02
RTFDC1-207ENST00000477573 PPP2R5AQ15172 486 aa14.9□□□□□ -0.02
RTFDC1-207ENST00000477573 KRT24Q2M2I5 525 aa14.9□□□□□ -0.02
RTFDC1-207ENST00000477573 KIF2CQ99661 725 aa14.9□□□□□ -0.02
RTFDC1-207ENST00000477573 PYCARDQ9ULZ3 195 aa14.9□□□□□ -0.02
RTFDC1-207ENST00000477573 SPATA31A3Q5VYP0 1347 aa14.9□□□□□ -0.02
RTFDC1-207ENST00000477573 ZBTB7BO15156 539 aaPredicted RBP14.9□□□□□ -0.02
RTFDC1-207ENST00000477573 STK31Q9BXU1 1019 aa14.9□□□□□ -0.02
RTFDC1-207ENST00000477573 PXDNQ92626 1479 aa14.89□□□□□ -0.03
RTFDC1-207ENST00000477573 CAMTA1Q9Y6Y1 1673 aa14.89□□□□□ -0.03
RTFDC1-207ENST00000477573 ANKRD33BA6NCL7 494 aa14.89□□□□□ -0.03
RTFDC1-207ENST00000477573 C1orf141Q5JVX7 400 aa14.89□□□□□ -0.03
RTFDC1-207ENST00000477573 ZNF530Q6P9A1 599 aaPredicted RBP14.89□□□□□ -0.03
RTFDC1-207ENST00000477573 DDX17Q92841 729 aaKnown RBP14.89□□□□□ -0.03
RTFDC1-207ENST00000477573 AK7Q96M32 723 aa14.89□□□□□ -0.03
RTFDC1-207ENST00000477573 KCNF1Q9H3M0 494 aa14.89□□□□□ -0.03
RTFDC1-207ENST00000477573 ABCC6O95255 1503 aa14.89□□□□□ -0.03
RTFDC1-207ENST00000477573 CEMIPQ8WUJ3 1361 aa14.89□□□□□ -0.03
RTFDC1-207ENST00000477573 ERBB3P21860 1342 aa14.89□□□□□ -0.03
RTFDC1-207ENST00000477573 SLC4A2P04920 1241 aa14.88□□□□□ -0.03
RTFDC1-207ENST00000477573 CCDC30Q5VVM6 783 aa14.88□□□□□ -0.03
RTFDC1-207ENST00000477573 AXIN2Q9Y2T1 843 aa14.88□□□□□ -0.03
RTFDC1-207ENST00000477573 FHOD1Q9Y613 1164 aa14.88□□□□□ -0.03
RTFDC1-207ENST00000477573 ATP8B1O43520 1251 aa14.88□□□□□ -0.03
RTFDC1-207ENST00000477573 IRX1P78414 480 aaPredicted RBP14.88□□□□□ -0.03
RTFDC1-207ENST00000477573 ZC3H12AQ5D1E8 599 aaKnown RBP14.88□□□□□ -0.03
RTFDC1-207ENST00000477573 INTS3Q68E01 1043 aaKnown RBP14.88□□□□□ -0.03
RTFDC1-207ENST00000477573 BRINP3Q76B58 766 aa14.88□□□□□ -0.03
RTFDC1-207ENST00000477573 PAIP2Q9BPZ3 127 aaKnown RBP14.88□□□□□ -0.03
RTFDC1-207ENST00000477573 ZBTB12Q9Y330 459 aaPredicted RBP14.88□□□□□ -0.03
RTFDC1-207ENST00000477573 ZNF335Q9H4Z2 1342 aaPredicted RBP14.87□□□□□ -0.03
RTFDC1-207ENST00000477573 LMO7Q8WWI1 1683 aa14.87□□□□□ -0.03
RTFDC1-207ENST00000477573 H2AFXP16104 143 aaPredicted RBP14.87□□□□□ -0.03
RTFDC1-207ENST00000477573 ERCC3P19447 782 aa14.87□□□□□ -0.03
RTFDC1-207ENST00000477573 FAM212AQ96EL1 285 aa14.87□□□□□ -0.03
RTFDC1-207ENST00000477573 PRDM16Q9HAZ2 1276 aa14.87□□□□□ -0.03
RTFDC1-207ENST00000477573 SLAIN2Q9P270 581 aa14.87□□□□□ -0.03
RTFDC1-207ENST00000477573 C21orf2O43822 256 aa14.87□□□□□ -0.03
RTFDC1-207ENST00000477573 KDM4AO75164 1064 aa14.87□□□□□ -0.03
RTFDC1-207ENST00000477573 TEFQ10587 303 aa14.87□□□□□ -0.03
RTFDC1-207ENST00000477573 E2F4Q16254 413 aa14.87□□□□□ -0.03
RTFDC1-207ENST00000477573 OVOS2A0A0G2JMS6 1433 aa14.86□□□□□ -0.03
RTFDC1-207ENST00000477573 CACNA1FO60840 1977 aa14.86□□□□□ -0.03
RTFDC1-207ENST00000477573 CC2D2BQ6DHV5 1058 aa14.86□□□□□ -0.03
RTFDC1-207ENST00000477573 FOXD4L1Q9NU39 408 aa14.86□□□□□ -0.03
RTFDC1-207ENST00000477573 RGPD5Q99666 1765 aa14.86□□□□□ -0.03
RTFDC1-207ENST00000477573 IPO7O95373 1038 aaKnown RBP14.85□□□□□ -0.03
RTFDC1-207ENST00000477573 NAA30Q147X3 362 aaPredicted RBP14.85□□□□□ -0.03
RTFDC1-207ENST00000477573 RAPGEF4Q8WZA2 1011 aa14.85□□□□□ -0.03
RTFDC1-207ENST00000477573 KIF2AO00139 706 aaPredicted RBP14.85□□□□□ -0.03
RTFDC1-207ENST00000477573 CD2BP2O95400 341 aaKnown RBP14.85□□□□□ -0.03
RTFDC1-207ENST00000477573 EXOC4Q96A65 974 aa14.85□□□□□ -0.03
RTFDC1-207ENST00000477573 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.85□□□□□ -0.03
RTFDC1-207ENST00000477573 FAM208AQ9UK61 1670 aaKnown RBP14.85□□□□□ -0.03
RTFDC1-207ENST00000477573 CPDO75976 1380 aa14.85□□□□□ -0.03
RTFDC1-207ENST00000477573 PNMA6AP0CW24 399 aaPredicted RBP14.84□□□□□ -0.03
RTFDC1-207ENST00000477573 USP8P40818 1118 aa14.84□□□□□ -0.03
RTFDC1-207ENST00000477573 PLA2G4AP47712 749 aa14.84□□□□□ -0.03
RTFDC1-207ENST00000477573 MTA1Q13330 715 aa14.84□□□□□ -0.03
RTFDC1-207ENST00000477573 STAG1Q8WVM7 1258 aa14.84□□□□□ -0.03
RTFDC1-207ENST00000477573 NLRP2Q9NX02 1062 aa14.84□□□□□ -0.03
RTFDC1-207ENST00000477573 TPM1P09493 284 aa14.84□□□□□ -0.03
RTFDC1-207ENST00000477573 HOXB7P09629 217 aa14.84□□□□□ -0.03
RTFDC1-207ENST00000477573 CSB-PGBD3P0DP91 1061 aa14.84□□□□□ -0.03
RTFDC1-207ENST00000477573 GTF3C6Q969F1 213 aa14.84□□□□□ -0.03
RTFDC1-207ENST00000477573 SMARCE1Q969G3 411 aa14.84□□□□□ -0.03
RTFDC1-207ENST00000477573 GCC1Q96CN9 775 aa14.84□□□□□ -0.03
RTFDC1-207ENST00000477573 UBXN6Q9BZV1 441 aa14.84□□□□□ -0.03
RTFDC1-207ENST00000477573 ACTN2P35609 894 aa14.83□□□□□ -0.04
RTFDC1-207ENST00000477573 JAKMIP3Q5VZ66 844 aa14.83□□□□□ -0.04
RTFDC1-207ENST00000477573 NUCKS1Q9H1E3 243 aaKnown RBP14.83□□□□□ -0.04
RTFDC1-207ENST00000477573 RGS12O14924 1447 aa14.83□□□□□ -0.04
RTFDC1-207ENST00000477573 SGSM2O43147 1006 aa14.83□□□□□ -0.04
RTFDC1-207ENST00000477573 RPS6KA5O75582 802 aa14.83□□□□□ -0.04
RTFDC1-207ENST00000477573 SMC2O95347 1197 aa14.83□□□□□ -0.04
RTFDC1-207ENST00000477573 TATP17735 454 aaPredicted RBP14.83□□□□□ -0.04
RTFDC1-207ENST00000477573 CCT4P50991 539 aaKnown RBP14.83□□□□□ -0.04
RTFDC1-207ENST00000477573 CABLES1Q8TDN4 633 aa14.83□□□□□ -0.04
RTFDC1-207ENST00000477573 LGR6Q9HBX8 967 aa14.83□□□□□ -0.04
RTFDC1-207ENST00000477573 SOS2Q07890 1332 aaPredicted RBP14.82□□□□□ -0.04
RTFDC1-207ENST00000477573 COL18A1P39060 1754 aa14.82□□□□□ -0.04
RTFDC1-207ENST00000477573 RNMTO43148 476 aaKnown RBP14.82□□□□□ -0.04
RTFDC1-207ENST00000477573 CORO7P57737 925 aa14.82□□□□□ -0.04
RTFDC1-207ENST00000477573 ZRSR1Q15695 479 aaKnown RBP14.82□□□□□ -0.04
RTFDC1-207ENST00000477573 MPRIPQ6WCQ1 1025 aa14.82□□□□□ -0.04
RTFDC1-207ENST00000477573 ZNF513Q8N8E2 541 aaPredicted RBP14.82□□□□□ -0.04
RTFDC1-207ENST00000477573 C16orf45Q96MC5 204 aaPredicted RBP14.82□□□□□ -0.04
RTFDC1-207ENST00000477573 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.82□□□□□ -0.045e-9■□□□□ 8.9
RTFDC1-207ENST00000477573 ZNF215Q9UL58 517 aaPredicted RBP14.82□□□□□ -0.04
RTFDC1-207ENST00000477573 CRYBG1Q9Y4K1 1723 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms